Protein–RNA interactions for Protein: Q6ZSA7

LRRC55, Leucine-rich repeat-containing protein 55, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC55Q6ZSA7 MIR3613-201ENST00000579844 87 ntBASIC2.16□□□□□ -2.06
LRRC55Q6ZSA7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.16□□□□□ -2.06
LRRC55Q6ZSA7 MIR5197-201ENST00000583721 112 ntBASIC2.16□□□□□ -2.06
LRRC55Q6ZSA7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.16□□□□□ -2.06
LRRC55Q6ZSA7 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.16□□□□□ -2.06
LRRC55Q6ZSA7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.16□□□□□ -2.06
LRRC55Q6ZSA7 MTND5P18-201ENST00000445624 1801 ntBASIC2.16□□□□□ -2.06
LRRC55Q6ZSA7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LRRC55Q6ZSA7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
LRRC55Q6ZSA7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
LRRC55Q6ZSA7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.15□□□□□ -2.07
LRRC55Q6ZSA7 RNU6-1019P-201ENST00000364424 107 ntBASIC2.15□□□□□ -2.07
LRRC55Q6ZSA7 Y_RNA.346-201ENST00000365385 112 ntBASIC2.15□□□□□ -2.07
LRRC55Q6ZSA7 RNU6-147P-201ENST00000383983 107 ntBASIC2.15□□□□□ -2.07
LRRC55Q6ZSA7 RNA5SP109-201ENST00000391010 116 ntBASIC2.15□□□□□ -2.07
LRRC55Q6ZSA7 RNA5SP482-201ENST00000391269 118 ntBASIC2.15□□□□□ -2.07
LRRC55Q6ZSA7 BX510359.4-201ENST00000423750 193 ntBASIC2.15□□□□□ -2.07
LRRC55Q6ZSA7 CALM2P4-201ENST00000430810 426 ntBASIC2.15□□□□□ -2.07
LRRC55Q6ZSA7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.15□□□□□ -2.07
LRRC55Q6ZSA7 RNA5SP458-201ENST00000516188 119 ntBASIC2.15□□□□□ -2.07
LRRC55Q6ZSA7 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.15□□□□□ -2.07
LRRC55Q6ZSA7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
LRRC55Q6ZSA7 SNORD14E-201ENST00000364009 85 ntBASIC2.14□□□□□ -2.07
LRRC55Q6ZSA7 U8.5-201ENST00000364528 136 ntBASIC2.14□□□□□ -2.07
LRRC55Q6ZSA7 Y_RNA.265-201ENST00000364677 108 ntBASIC2.14□□□□□ -2.07
LRRC55Q6ZSA7 Y_RNA.366-201ENST00000365540 102 ntBASIC2.14□□□□□ -2.07
LRRC55Q6ZSA7 RNU6-442P-201ENST00000383968 104 ntBASIC2.14□□□□□ -2.07
LRRC55Q6ZSA7 MIR583-201ENST00000384846 75 ntBASIC2.14□□□□□ -2.07
LRRC55Q6ZSA7 RNA5SP465-201ENST00000391195 109 ntBASIC2.14□□□□□ -2.07
LRRC55Q6ZSA7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.14□□□□□ -2.07
LRRC55Q6ZSA7 RNA5SP182-201ENST00000516064 82 ntBASIC2.14□□□□□ -2.07
LRRC55Q6ZSA7 MIR4762-201ENST00000585261 75 ntBASIC2.14□□□□□ -2.07
LRRC55Q6ZSA7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
LRRC55Q6ZSA7 ICE2P2-201ENST00000483823 2787 ntBASIC2.13□□□□□ -2.07
LRRC55Q6ZSA7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
LRRC55Q6ZSA7 RNU6-1298P-201ENST00000362456 101 ntBASIC2.13□□□□□ -2.07
LRRC55Q6ZSA7 SNORA67.1-201ENST00000364749 141 ntBASIC2.13□□□□□ -2.07
LRRC55Q6ZSA7 RNU11-3P-201ENST00000391111 133 ntBASIC2.13□□□□□ -2.07
LRRC55Q6ZSA7 AC019129.1-201ENST00000403786 261 ntBASIC2.13□□□□□ -2.07
LRRC55Q6ZSA7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.13□□□□□ -2.07
LRRC55Q6ZSA7 MIR3935-201ENST00000583472 104 ntBASIC2.13□□□□□ -2.07
LRRC55Q6ZSA7 uc_338.28-201ENST00000612082 187 ntBASIC2.13□□□□□ -2.07
LRRC55Q6ZSA7 AC006441.5-201ENST00000612680 209 ntBASIC2.13□□□□□ -2.07
LRRC55Q6ZSA7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.13□□□□□ -2.07
LRRC55Q6ZSA7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
LRRC55Q6ZSA7 RNU6-1084P-201ENST00000362498 107 ntBASIC2.12□□□□□ -2.07
LRRC55Q6ZSA7 snoU2-30.1-201ENST00000365012 70 ntBASIC2.12□□□□□ -2.07
LRRC55Q6ZSA7 Y_RNA.528-201ENST00000384575 108 ntBASIC2.12□□□□□ -2.07
LRRC55Q6ZSA7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.12□□□□□ -2.07
LRRC55Q6ZSA7 SNRPGP14-201ENST00000435400 219 ntBASIC2.12□□□□□ -2.07
LRRC55Q6ZSA7 STAG3L5P-204ENST00000443759 179 ntBASIC2.12□□□□□ -2.07
LRRC55Q6ZSA7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.12□□□□□ -2.07
LRRC55Q6ZSA7 AC084364.2-201ENST00000546924 395 ntBASIC2.12□□□□□ -2.07
LRRC55Q6ZSA7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.12□□□□□ -2.07
LRRC55Q6ZSA7 SNORA28-201ENST00000606769 126 ntBASIC2.12□□□□□ -2.07
LRRC55Q6ZSA7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LRRC55Q6ZSA7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
LRRC55Q6ZSA7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
LRRC55Q6ZSA7 AC008555.8-201ENST00000623602 2168 ntBASIC2.12□□□□□ -2.07
LRRC55Q6ZSA7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
LRRC55Q6ZSA7 Y_RNA.140-201ENST00000363474 103 ntBASIC2.11□□□□□ -2.07
LRRC55Q6ZSA7 RNU6-268P-201ENST00000364174 107 ntBASIC2.11□□□□□ -2.07
LRRC55Q6ZSA7 RNU1-52P-201ENST00000384190 164 ntBASIC2.11□□□□□ -2.07
LRRC55Q6ZSA7 RNU6-950P-201ENST00000384651 107 ntBASIC2.11□□□□□ -2.07
LRRC55Q6ZSA7 MIR144-201ENST00000384886 86 ntBASIC2.11□□□□□ -2.07
LRRC55Q6ZSA7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
LRRC55Q6ZSA7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.11□□□□□ -2.07
LRRC55Q6ZSA7 AC003989.2-201ENST00000440224 169 ntBASIC2.11□□□□□ -2.07
LRRC55Q6ZSA7 RNU6-240P-201ENST00000516098 97 ntBASIC2.11□□□□□ -2.07
LRRC55Q6ZSA7 SNORD45.4-201ENST00000516629 73 ntBASIC2.11□□□□□ -2.07
LRRC55Q6ZSA7 SNORD36C-201ENST00000516733 66 ntBASIC2.11□□□□□ -2.07
LRRC55Q6ZSA7 MIR5094-201ENST00000578766 85 ntBASIC2.11□□□□□ -2.07
LRRC55Q6ZSA7 AP000942.3-201ENST00000603702 160 ntBASIC2.11□□□□□ -2.07
LRRC55Q6ZSA7 AC015726.2-201ENST00000620112 122 ntBASIC2.11□□□□□ -2.07
LRRC55Q6ZSA7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.11□□□□□ -2.07
LRRC55Q6ZSA7 SNORD115-28-201ENST00000363931 81 ntBASIC2.1□□□□□ -2.07
LRRC55Q6ZSA7 Y_RNA.547-201ENST00000384654 119 ntBASIC2.1□□□□□ -2.07
LRRC55Q6ZSA7 MIR518A2-201ENST00000384966 87 ntBASIC2.1□□□□□ -2.07
LRRC55Q6ZSA7 MIR597-201ENST00000384968 97 ntBASIC2.1□□□□□ -2.07
LRRC55Q6ZSA7 SNORA17.3-201ENST00000391159 129 ntBASIC2.1□□□□□ -2.07
LRRC55Q6ZSA7 HMGN2P32-201ENST00000444648 269 ntBASIC2.1□□□□□ -2.07
LRRC55Q6ZSA7 RPL23AP63-201ENST00000498752 471 ntBASIC2.1□□□□□ -2.07
LRRC55Q6ZSA7 RNU6-113P-201ENST00000516653 101 ntBASIC2.1□□□□□ -2.07
LRRC55Q6ZSA7 AL137067.1-201ENST00000615933 120 ntBASIC2.1□□□□□ -2.07
LRRC55Q6ZSA7 AC134878.1-201ENST00000619901 243 ntBASIC2.1□□□□□ -2.07
LRRC55Q6ZSA7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.1□□□□□ -2.07
LRRC55Q6ZSA7 MIR450A1-201ENST00000362262 91 ntBASIC2.09□□□□□ -2.07
LRRC55Q6ZSA7 Y_RNA.37-201ENST00000362606 108 ntBASIC2.09□□□□□ -2.07
LRRC55Q6ZSA7 SNORA2.2-201ENST00000365473 135 ntBASIC2.09□□□□□ -2.07
LRRC55Q6ZSA7 RNU6-1189P-201ENST00000383958 107 ntBASIC2.09□□□□□ -2.07
LRRC55Q6ZSA7 RNU6-440P-201ENST00000390882 105 ntBASIC2.09□□□□□ -2.07
LRRC55Q6ZSA7 HMGN2P39-201ENST00000398005 273 ntBASIC2.09□□□□□ -2.07
LRRC55Q6ZSA7 SUMO2P12-201ENST00000405924 140 ntBASIC2.09□□□□□ -2.07
LRRC55Q6ZSA7 RNA5SP270-201ENST00000411361 118 ntBASIC2.09□□□□□ -2.07
LRRC55Q6ZSA7 AL445685.2-201ENST00000422551 342 ntBASIC2.09□□□□□ -2.07
LRRC55Q6ZSA7 RNA5SP82-201ENST00000516707 92 ntBASIC2.09□□□□□ -2.07
LRRC55Q6ZSA7 RNU6-1116P-201ENST00000517269 99 ntBASIC2.09□□□□□ -2.07
LRRC55Q6ZSA7 MIR8054-201ENST00000620877 86 ntBASIC2.09□□□□□ -2.07
LRRC55Q6ZSA7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.09□□□□□ -2.07
LRRC55Q6ZSA7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.09□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 193.9 ms