Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SNORD115-4-201ENST00000363810 82 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-6-201ENST00000363942 82 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-42-201ENST00000364273 82 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-15-201ENST00000364809 81 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-26-201ENST00000365067 82 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-10-201ENST00000365073 81 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-43-201ENST00000365503 82 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD115-36-201ENST00000365629 82 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 RNU6-1319P-201ENST00000390855 104 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 RNU6-747P-201ENST00000390928 104 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORD77B-201ENST00000391112 67 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 RNU6-241P-201ENST00000391148 104 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 MIR1289-1-201ENST00000408836 144 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 RNU6-177P-201ENST00000411257 104 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 AC245047.3-201ENST00000429428 127 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 RNU7-34P-201ENST00000459394 64 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 RN7SL297P-201ENST00000483161 293 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 RNU6-1006P-201ENST00000516998 103 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 SNORA48.11-201ENST00000517015 89 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 MIR4712-201ENST00000583750 82 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 AC096720.1-201ENST00000604441 183 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 MIR6841-201ENST00000637129 72 ntBASIC3.11□□□□□ -1.91
FOXR1Q6PIV2 RNU6-163P-201ENST00000384396 106 ntBASIC3.1□□□□□ -1.91
FOXR1Q6PIV2 SNORA44-201ENST00000384584 132 ntBASIC3.1□□□□□ -1.91
FOXR1Q6PIV2 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.1□□□□□ -1.91
FOXR1Q6PIV2 STAG3L5P-204ENST00000443759 179 ntBASIC3.1□□□□□ -1.91
FOXR1Q6PIV2 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.1□□□□□ -1.91
FOXR1Q6PIV2 SNORA31.26-201ENST00000517250 137 ntBASIC3.1□□□□□ -1.91
FOXR1Q6PIV2 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.1□□□□□ -1.91
FOXR1Q6PIV2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
FOXR1Q6PIV2 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
FOXR1Q6PIV2 Y_RNA.140-201ENST00000363474 103 ntBASIC3.09□□□□□ -1.91
FOXR1Q6PIV2 SNORA26.6-201ENST00000391256 115 ntBASIC3.09□□□□□ -1.91
FOXR1Q6PIV2 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.09□□□□□ -1.91
FOXR1Q6PIV2 AC015922.2-201ENST00000435593 184 ntBASIC3.09□□□□□ -1.91
FOXR1Q6PIV2 RN7SL633P-201ENST00000488974 297 ntBASIC3.09□□□□□ -1.91
FOXR1Q6PIV2 AC024995.1-201ENST00000523014 93 ntBASIC3.09□□□□□ -1.91
FOXR1Q6PIV2 MIR3124-201ENST00000582636 67 ntBASIC3.09□□□□□ -1.91
FOXR1Q6PIV2 MIR4439-201ENST00000583746 80 ntBASIC3.09□□□□□ -1.91
FOXR1Q6PIV2 UBL5P2-201ENST00000583788 219 ntBASIC3.09□□□□□ -1.91
FOXR1Q6PIV2 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
FOXR1Q6PIV2 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
FOXR1Q6PIV2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
FOXR1Q6PIV2 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.08□□□□□ -1.92
FOXR1Q6PIV2 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
FOXR1Q6PIV2 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.08□□□□□ -1.92
FOXR1Q6PIV2 MIR1262-201ENST00000408276 93 ntBASIC3.08□□□□□ -1.92
FOXR1Q6PIV2 MIR1267-201ENST00000408723 78 ntBASIC3.08□□□□□ -1.92
FOXR1Q6PIV2 CST2P1-201ENST00000425770 87 ntBASIC3.08□□□□□ -1.92
FOXR1Q6PIV2 AC008885.1-201ENST00000514930 301 ntBASIC3.08□□□□□ -1.92
FOXR1Q6PIV2 IGLV3-17-201ENST00000519099 244 ntBASIC3.08□□□□□ -1.92
FOXR1Q6PIV2 AL356280.1-201ENST00000603614 379 ntBASIC3.08□□□□□ -1.92
FOXR1Q6PIV2 AL355297.2-201ENST00000604792 129 ntBASIC3.08□□□□□ -1.92
FOXR1Q6PIV2 AC020891.4-201ENST00000605745 93 ntBASIC3.08□□□□□ -1.92
FOXR1Q6PIV2 MIR7157-201ENST00000635801 60 ntBASIC3.08□□□□□ -1.92
FOXR1Q6PIV2 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
FOXR1Q6PIV2 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.07□□□□□ -1.92
FOXR1Q6PIV2 RNU6-1072P-201ENST00000384703 107 ntBASIC3.07□□□□□ -1.92
FOXR1Q6PIV2 RNU6-443P-201ENST00000384780 107 ntBASIC3.07□□□□□ -1.92
FOXR1Q6PIV2 UBL5P3-201ENST00000475112 231 ntBASIC3.07□□□□□ -1.92
FOXR1Q6PIV2 RNU6-958P-201ENST00000516995 106 ntBASIC3.07□□□□□ -1.92
FOXR1Q6PIV2 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.07□□□□□ -1.92
FOXR1Q6PIV2 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.07□□□□□ -1.92
FOXR1Q6PIV2 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
FOXR1Q6PIV2 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXR1Q6PIV2 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXR1Q6PIV2 AC007336.1-201ENST00000576365 3828 ntBASIC3.06□□□□□ -1.92
FOXR1Q6PIV2 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXR1Q6PIV2 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXR1Q6PIV2 RNU6-613P-201ENST00000410412 108 ntBASIC3.06□□□□□ -1.92
FOXR1Q6PIV2 AL442644.1-201ENST00000454390 3105 ntBASIC3.06□□□□□ -1.92
FOXR1Q6PIV2 CYP2C59P-201ENST00000457790 269 ntBASIC3.06□□□□□ -1.92
FOXR1Q6PIV2 RN7SL636P-201ENST00000497504 294 ntBASIC3.06□□□□□ -1.92
FOXR1Q6PIV2 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.06□□□□□ -1.92
FOXR1Q6PIV2 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.06□□□□□ -1.92
FOXR1Q6PIV2 SNORA31.10-201ENST00000516482 106 ntBASIC3.06□□□□□ -1.92
FOXR1Q6PIV2 RNU6-826P-201ENST00000516827 104 ntBASIC3.06□□□□□ -1.92
FOXR1Q6PIV2 RNU6-711P-201ENST00000517255 106 ntBASIC3.06□□□□□ -1.92
FOXR1Q6PIV2 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXR1Q6PIV2 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
FOXR1Q6PIV2 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.05□□□□□ -1.92
FOXR1Q6PIV2 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.05□□□□□ -1.92
FOXR1Q6PIV2 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.05□□□□□ -1.92
FOXR1Q6PIV2 AC023141.11-201ENST00000508864 202 ntBASIC3.05□□□□□ -1.92
FOXR1Q6PIV2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.05□□□□□ -1.92
FOXR1Q6PIV2 AC006023.1-201ENST00000603944 259 ntBASIC3.05□□□□□ -1.92
FOXR1Q6PIV2 AL033523.1-201ENST00000605153 153 ntBASIC3.05□□□□□ -1.92
FOXR1Q6PIV2 MIR4791-201ENST00000607666 84 ntBASIC3.05□□□□□ -1.92
FOXR1Q6PIV2 MIR8054-201ENST00000620877 86 ntBASIC3.05□□□□□ -1.92
FOXR1Q6PIV2 MAPK10-322ENST00000641485 4530 ntBASIC3.05□□□□□ -1.92
FOXR1Q6PIV2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
FOXR1Q6PIV2 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
FOXR1Q6PIV2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.04□□□□□ -1.92
FOXR1Q6PIV2 RNU6-457P-201ENST00000363999 107 ntBASIC3.04□□□□□ -1.92
FOXR1Q6PIV2 SNORA71.1-201ENST00000364523 117 ntBASIC3.04□□□□□ -1.92
FOXR1Q6PIV2 MIR34C-201ENST00000384831 77 ntBASIC3.04□□□□□ -1.92
FOXR1Q6PIV2 MIR515-2-201ENST00000384883 83 ntBASIC3.04□□□□□ -1.92
FOXR1Q6PIV2 MIR515-1-201ENST00000384884 83 ntBASIC3.04□□□□□ -1.92
FOXR1Q6PIV2 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms