Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 Y_RNA.447-201ENST00000384184 113 ntBASIC0.96□□□□□ -2.26
ZNF544Q6NX49 MT-TG-201ENST00000387429 68 ntBASIC0.96□□□□□ -2.26
ZNF544Q6NX49 SNORD72-201ENST00000390994 80 ntBASIC0.96□□□□□ -2.26
ZNF544Q6NX49 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.96□□□□□ -2.26
ZNF544Q6NX49 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.96□□□□□ -2.26
ZNF544Q6NX49 Y_RNA.679-201ENST00000516416 91 ntBASIC0.96□□□□□ -2.26
ZNF544Q6NX49 RNU6-126P-201ENST00000516685 103 ntBASIC0.96□□□□□ -2.26
ZNF544Q6NX49 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.96□□□□□ -2.26
ZNF544Q6NX49 MIR4662B-201ENST00000579498 81 ntBASIC0.96□□□□□ -2.26
ZNF544Q6NX49 MIR3128-201ENST00000581957 66 ntBASIC0.96□□□□□ -2.26
ZNF544Q6NX49 MIR4452-201ENST00000583004 71 ntBASIC0.96□□□□□ -2.26
ZNF544Q6NX49 AL357312.1-201ENST00000603879 298 ntBASIC0.96□□□□□ -2.26
ZNF544Q6NX49 AL391903.3-201ENST00000612158 163 ntBASIC0.96□□□□□ -2.26
ZNF544Q6NX49 RNU6-268P-201ENST00000364174 107 ntBASIC0.95□□□□□ -2.26
ZNF544Q6NX49 Y_RNA.292-201ENST00000364904 97 ntBASIC0.95□□□□□ -2.26
ZNF544Q6NX49 Y_RNA.307-201ENST00000365022 117 ntBASIC0.95□□□□□ -2.26
ZNF544Q6NX49 MIR136-201ENST00000385207 82 ntBASIC0.95□□□□□ -2.26
ZNF544Q6NX49 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
ZNF544Q6NX49 RNU6-381P-201ENST00000391259 108 ntBASIC0.95□□□□□ -2.26
ZNF544Q6NX49 RNU2-55P-201ENST00000411146 174 ntBASIC0.95□□□□□ -2.26
ZNF544Q6NX49 AC023449.1-201ENST00000454464 154 ntBASIC0.95□□□□□ -2.26
ZNF544Q6NX49 SNORD116-28-201ENST00000516123 91 ntBASIC0.95□□□□□ -2.26
ZNF544Q6NX49 RNU7-149P-201ENST00000516739 59 ntBASIC0.95□□□□□ -2.26
ZNF544Q6NX49 RNU6-922P-201ENST00000516753 99 ntBASIC0.95□□□□□ -2.26
ZNF544Q6NX49 AC006006.1-201ENST00000603082 144 ntBASIC0.95□□□□□ -2.26
ZNF544Q6NX49 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
ZNF544Q6NX49 RNA5SP327-201ENST00000362494 101 ntBASIC0.94□□□□□ -2.26
ZNF544Q6NX49 Y_RNA.24-201ENST00000362508 103 ntBASIC0.94□□□□□ -2.26
ZNF544Q6NX49 Y_RNA.54-201ENST00000362766 105 ntBASIC0.94□□□□□ -2.26
ZNF544Q6NX49 Y_RNA.60-201ENST00000362831 98 ntBASIC0.94□□□□□ -2.26
ZNF544Q6NX49 Y_RNA.116-201ENST00000363292 103 ntBASIC0.94□□□□□ -2.26
ZNF544Q6NX49 snoU2_19.4-201ENST00000364329 80 ntBASIC0.94□□□□□ -2.26
ZNF544Q6NX49 Y_RNA.262-201ENST00000364641 102 ntBASIC0.94□□□□□ -2.26
ZNF544Q6NX49 Y_RNA.572-201ENST00000384757 98 ntBASIC0.94□□□□□ -2.26
ZNF544Q6NX49 MIR518E-201ENST00000385252 88 ntBASIC0.94□□□□□ -2.26
ZNF544Q6NX49 MIR616-201ENST00000385293 97 ntBASIC0.94□□□□□ -2.26
ZNF544Q6NX49 RNU4-71P-201ENST00000516258 113 ntBASIC0.94□□□□□ -2.26
ZNF544Q6NX49 SNORA74.3-201ENST00000517108 154 ntBASIC0.94□□□□□ -2.26
ZNF544Q6NX49 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.94□□□□□ -2.26
ZNF544Q6NX49 CYP3A52P-201ENST00000563326 91 ntBASIC0.94□□□□□ -2.26
ZNF544Q6NX49 FAM106DP-201ENST00000586416 501 ntBASIC0.94□□□□□ -2.26
ZNF544Q6NX49 AC097639.2-201ENST00000603159 172 ntBASIC0.94□□□□□ -2.26
ZNF544Q6NX49 AL078603.1-201ENST00000603824 313 ntBASIC0.94□□□□□ -2.26
ZNF544Q6NX49 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
ZNF544Q6NX49 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.94□□□□□ -2.26
ZNF544Q6NX49 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
ZNF544Q6NX49 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
ZNF544Q6NX49 RNU6-1187P-201ENST00000364771 110 ntBASIC0.93□□□□□ -2.26
ZNF544Q6NX49 RNU4-17P-201ENST00000365598 141 ntBASIC0.93□□□□□ -2.26
ZNF544Q6NX49 SNORD38C-201ENST00000384381 69 ntBASIC0.93□□□□□ -2.26
ZNF544Q6NX49 MIR222-201ENST00000384992 110 ntBASIC0.93□□□□□ -2.26
ZNF544Q6NX49 RNU6-1054P-201ENST00000411293 104 ntBASIC0.93□□□□□ -2.26
ZNF544Q6NX49 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.93□□□□□ -2.26
ZNF544Q6NX49 SCARNA8-201ENST00000515924 131 ntBASIC0.93□□□□□ -2.26
ZNF544Q6NX49 RN7SKP164-201ENST00000516138 266 ntBASIC0.93□□□□□ -2.26
ZNF544Q6NX49 RNU7-40P-201ENST00000516397 64 ntBASIC0.93□□□□□ -2.26
ZNF544Q6NX49 AL049861.1-201ENST00000603130 150 ntBASIC0.93□□□□□ -2.26
ZNF544Q6NX49 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.92□□□□□ -2.26
ZNF544Q6NX49 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
ZNF544Q6NX49 SNORD114-27-201ENST00000363766 70 ntBASIC0.92□□□□□ -2.26
ZNF544Q6NX49 SNORD27-201ENST00000363981 72 ntBASIC0.92□□□□□ -2.26
ZNF544Q6NX49 SNORD114-22-201ENST00000365423 72 ntBASIC0.92□□□□□ -2.26
ZNF544Q6NX49 RNU6-484P-201ENST00000384016 107 ntBASIC0.92□□□□□ -2.26
ZNF544Q6NX49 Y_RNA.477-201ENST00000384352 108 ntBASIC0.92□□□□□ -2.26
ZNF544Q6NX49 Y_RNA.508-201ENST00000384502 114 ntBASIC0.92□□□□□ -2.26
ZNF544Q6NX49 MIR516B2-201ENST00000385190 85 ntBASIC0.92□□□□□ -2.26
ZNF544Q6NX49 RNU6-1228P-201ENST00000391014 107 ntBASIC0.92□□□□□ -2.26
ZNF544Q6NX49 Y_RNA.587-201ENST00000391210 103 ntBASIC0.92□□□□□ -2.26
ZNF544Q6NX49 Y_RNA.618-201ENST00000410949 107 ntBASIC0.92□□□□□ -2.26
ZNF544Q6NX49 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.92□□□□□ -2.26
ZNF544Q6NX49 RNU4-57P-201ENST00000515980 135 ntBASIC0.92□□□□□ -2.26
ZNF544Q6NX49 RNU7-43P-201ENST00000516554 64 ntBASIC0.92□□□□□ -2.26
ZNF544Q6NX49 RNU6-111P-201ENST00000517179 105 ntBASIC0.92□□□□□ -2.26
ZNF544Q6NX49 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
ZNF544Q6NX49 Y_RNA.118-201ENST00000363300 101 ntBASIC0.91□□□□□ -2.26
ZNF544Q6NX49 RNU6-103P-201ENST00000363686 107 ntBASIC0.91□□□□□ -2.26
ZNF544Q6NX49 SNORA20.1-201ENST00000364790 130 ntBASIC0.91□□□□□ -2.26
ZNF544Q6NX49 SNORD24-201ENST00000383884 75 ntBASIC0.91□□□□□ -2.26
ZNF544Q6NX49 Y_RNA.401-201ENST00000383965 117 ntBASIC0.91□□□□□ -2.26
ZNF544Q6NX49 MIR802-201ENST00000390235 94 ntBASIC0.91□□□□□ -2.26
ZNF544Q6NX49 Y_RNA.626-201ENST00000411288 95 ntBASIC0.91□□□□□ -2.26
ZNF544Q6NX49 RNA5SP153-201ENST00000516498 76 ntBASIC0.91□□□□□ -2.26
ZNF544Q6NX49 RN7SKP88-201ENST00000516847 250 ntBASIC0.91□□□□□ -2.26
ZNF544Q6NX49 RNA5SP404-201ENST00000517118 132 ntBASIC0.91□□□□□ -2.26
ZNF544Q6NX49 AC009779.6-201ENST00000603972 165 ntBASIC0.91□□□□□ -2.26
ZNF544Q6NX49 AL096861.1-201ENST00000610899 123 ntBASIC0.91□□□□□ -2.26
ZNF544Q6NX49 7SK.8-201ENST00000612110 250 ntBASIC0.91□□□□□ -2.26
ZNF544Q6NX49 7SK.11-201ENST00000615477 250 ntBASIC0.91□□□□□ -2.26
ZNF544Q6NX49 Pinc.1-201ENST00000616452 154 ntBASIC0.91□□□□□ -2.26
ZNF544Q6NX49 7SK.13-201ENST00000622040 250 ntBASIC0.91□□□□□ -2.26
ZNF544Q6NX49 Y_RNA.121-201ENST00000363309 113 ntBASIC0.9□□□□□ -2.27
ZNF544Q6NX49 RNU1-93P-201ENST00000364704 169 ntBASIC0.9□□□□□ -2.27
ZNF544Q6NX49 Y_RNA.355-201ENST00000365462 98 ntBASIC0.9□□□□□ -2.27
ZNF544Q6NX49 Y_RNA.486-201ENST00000384398 107 ntBASIC0.9□□□□□ -2.27
ZNF544Q6NX49 Y_RNA.489-201ENST00000384410 101 ntBASIC0.9□□□□□ -2.27
ZNF544Q6NX49 RNU4-43P-201ENST00000410628 137 ntBASIC0.9□□□□□ -2.27
ZNF544Q6NX49 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.9□□□□□ -2.27
ZNF544Q6NX49 SNORD123-201ENST00000459473 70 ntBASIC0.9□□□□□ -2.27
ZNF544Q6NX49 RPL39P28-201ENST00000465655 155 ntBASIC0.9□□□□□ -2.27
ZNF544Q6NX49 RPS23P4-201ENST00000487908 423 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms