Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 MIR4524B-201ENST00000581569 115 ntBASIC1.43□□□□□ -2.18
RUNDC3AQ59EK9 7SK.8-201ENST00000612110 250 ntBASIC1.43□□□□□ -2.18
RUNDC3AQ59EK9 7SK.11-201ENST00000615477 250 ntBASIC1.43□□□□□ -2.18
RUNDC3AQ59EK9 7SK.13-201ENST00000622040 250 ntBASIC1.43□□□□□ -2.18
RUNDC3AQ59EK9 RNU1-17P-201ENST00000363022 152 ntBASIC1.42□□□□□ -2.18
RUNDC3AQ59EK9 Y_RNA.182-201ENST00000363880 111 ntBASIC1.42□□□□□ -2.18
RUNDC3AQ59EK9 RNA5SP190-201ENST00000365222 118 ntBASIC1.42□□□□□ -2.18
RUNDC3AQ59EK9 Y_RNA.412-201ENST00000384001 104 ntBASIC1.42□□□□□ -2.18
RUNDC3AQ59EK9 RNU4-43P-201ENST00000410628 137 ntBASIC1.42□□□□□ -2.18
RUNDC3AQ59EK9 SNORD13-201ENST00000459299 104 ntBASIC1.42□□□□□ -2.18
RUNDC3AQ59EK9 Y_RNA.797-201ENST00000515977 94 ntBASIC1.42□□□□□ -2.18
RUNDC3AQ59EK9 RNU6-197P-201ENST00000516680 100 ntBASIC1.42□□□□□ -2.18
RUNDC3AQ59EK9 RNU6-1270P-201ENST00000517128 108 ntBASIC1.42□□□□□ -2.18
RUNDC3AQ59EK9 RNU7-181P-201ENST00000517234 74 ntBASIC1.42□□□□□ -2.18
RUNDC3AQ59EK9 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.42□□□□□ -2.18
RUNDC3AQ59EK9 BX248123.2-201ENST00000606318 124 ntBASIC1.42□□□□□ -2.18
RUNDC3AQ59EK9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
RUNDC3AQ59EK9 RNU6-888P-201ENST00000363010 101 ntBASIC1.41□□□□□ -2.18
RUNDC3AQ59EK9 RNU1-42P-201ENST00000364033 160 ntBASIC1.41□□□□□ -2.18
RUNDC3AQ59EK9 SNORA26-201ENST00000391286 122 ntBASIC1.41□□□□□ -2.18
RUNDC3AQ59EK9 U8.17-201ENST00000391292 132 ntBASIC1.41□□□□□ -2.18
RUNDC3AQ59EK9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.41□□□□□ -2.18
RUNDC3AQ59EK9 AL121914.1-201ENST00000450188 156 ntBASIC1.41□□□□□ -2.18
RUNDC3AQ59EK9 snoU13.25-201ENST00000458945 104 ntBASIC1.41□□□□□ -2.18
RUNDC3AQ59EK9 Y_RNA.644-201ENST00000459006 113 ntBASIC1.41□□□□□ -2.18
RUNDC3AQ59EK9 RNU6-693P-201ENST00000516134 107 ntBASIC1.41□□□□□ -2.18
RUNDC3AQ59EK9 RNU6-947P-201ENST00000516264 106 ntBASIC1.41□□□□□ -2.18
RUNDC3AQ59EK9 Y_RNA.674-201ENST00000516362 113 ntBASIC1.41□□□□□ -2.18
RUNDC3AQ59EK9 AC022559.1-201ENST00000520905 205 ntBASIC1.41□□□□□ -2.18
RUNDC3AQ59EK9 MIR4764-201ENST00000580680 88 ntBASIC1.41□□□□□ -2.18
RUNDC3AQ59EK9 MIR548AR-201ENST00000582191 57 ntBASIC1.41□□□□□ -2.18
RUNDC3AQ59EK9 MIR3192-201ENST00000584920 77 ntBASIC1.41□□□□□ -2.18
RUNDC3AQ59EK9 AL353997.5-201ENST00000618886 171 ntBASIC1.41□□□□□ -2.18
RUNDC3AQ59EK9 U6.106-201ENST00000636360 105 ntBASIC1.41□□□□□ -2.18
RUNDC3AQ59EK9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.41□□□□□ -2.18
RUNDC3AQ59EK9 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.4□□□□□ -2.19
RUNDC3AQ59EK9 RNU6-275P-201ENST00000364910 107 ntBASIC1.4□□□□□ -2.19
RUNDC3AQ59EK9 MIR520C-201ENST00000385005 87 ntBASIC1.4□□□□□ -2.19
RUNDC3AQ59EK9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.4□□□□□ -2.19
RUNDC3AQ59EK9 snoU13.23-201ENST00000458863 104 ntBASIC1.4□□□□□ -2.19
RUNDC3AQ59EK9 RNU7-41P-201ENST00000515917 61 ntBASIC1.4□□□□□ -2.19
RUNDC3AQ59EK9 RNU7-43P-201ENST00000516554 64 ntBASIC1.4□□□□□ -2.19
RUNDC3AQ59EK9 RNU6-504P-201ENST00000516568 104 ntBASIC1.4□□□□□ -2.19
RUNDC3AQ59EK9 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
RUNDC3AQ59EK9 Y_RNA.23-201ENST00000362496 106 ntBASIC1.39□□□□□ -2.19
RUNDC3AQ59EK9 Y_RNA.75-201ENST00000362927 97 ntBASIC1.39□□□□□ -2.19
RUNDC3AQ59EK9 SNORD115-28-201ENST00000363931 81 ntBASIC1.39□□□□□ -2.19
RUNDC3AQ59EK9 MIR517C-201ENST00000385103 95 ntBASIC1.39□□□□□ -2.19
RUNDC3AQ59EK9 MIR1323-201ENST00000408090 73 ntBASIC1.39□□□□□ -2.19
RUNDC3AQ59EK9 RNA5SP61-201ENST00000516453 100 ntBASIC1.39□□□□□ -2.19
RUNDC3AQ59EK9 MIR3683-201ENST00000580847 82 ntBASIC1.39□□□□□ -2.19
RUNDC3AQ59EK9 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.39□□□□□ -2.19
RUNDC3AQ59EK9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
RUNDC3AQ59EK9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.38□□□□□ -2.19
RUNDC3AQ59EK9 Y_RNA.140-201ENST00000363474 103 ntBASIC1.38□□□□□ -2.19
RUNDC3AQ59EK9 Y_RNA.233-201ENST00000364407 101 ntBASIC1.38□□□□□ -2.19
RUNDC3AQ59EK9 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.38□□□□□ -2.19
RUNDC3AQ59EK9 RNU6-847P-201ENST00000411115 108 ntBASIC1.38□□□□□ -2.19
RUNDC3AQ59EK9 RNU6-938P-201ENST00000411285 103 ntBASIC1.38□□□□□ -2.19
RUNDC3AQ59EK9 RPL39P39-201ENST00000455840 151 ntBASIC1.38□□□□□ -2.19
RUNDC3AQ59EK9 RNU6-1219P-201ENST00000516143 112 ntBASIC1.38□□□□□ -2.19
RUNDC3AQ59EK9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.38□□□□□ -2.19
RUNDC3AQ59EK9 MIR570-201ENST00000384917 97 ntBASIC1.37□□□□□ -2.19
RUNDC3AQ59EK9 SNORA79-201ENST00000408376 140 ntBASIC1.37□□□□□ -2.19
RUNDC3AQ59EK9 Y_RNA.793-201ENST00000411222 111 ntBASIC1.37□□□□□ -2.19
RUNDC3AQ59EK9 AC048334.1-201ENST00000477975 159 ntBASIC1.37□□□□□ -2.19
RUNDC3AQ59EK9 MRPS18CP4-201ENST00000535821 231 ntBASIC1.37□□□□□ -2.19
RUNDC3AQ59EK9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.37□□□□□ -2.19
RUNDC3AQ59EK9 AC090425.1-201ENST00000610007 140 ntBASIC1.37□□□□□ -2.19
RUNDC3AQ59EK9 MIR7974-201ENST00000615835 79 ntBASIC1.37□□□□□ -2.19
RUNDC3AQ59EK9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.37□□□□□ -2.19
RUNDC3AQ59EK9 AC008133.2-201ENST00000624540 351 ntBASIC1.37□□□□□ -2.19
RUNDC3AQ59EK9 Y_RNA.37-201ENST00000362606 108 ntBASIC1.36□□□□□ -2.19
RUNDC3AQ59EK9 RNU6-1318P-201ENST00000365389 103 ntBASIC1.36□□□□□ -2.19
RUNDC3AQ59EK9 RNU6-643P-201ENST00000384018 107 ntBASIC1.36□□□□□ -2.19
RUNDC3AQ59EK9 SNORD26-201ENST00000384147 75 ntBASIC1.36□□□□□ -2.19
RUNDC3AQ59EK9 RNU6-1054P-201ENST00000411293 104 ntBASIC1.36□□□□□ -2.19
RUNDC3AQ59EK9 AF228730.3-201ENST00000436691 102 ntBASIC1.36□□□□□ -2.19
RUNDC3AQ59EK9 AL138752.1-201ENST00000452964 351 ntBASIC1.36□□□□□ -2.19
RUNDC3AQ59EK9 SNORA31.2-201ENST00000516019 134 ntBASIC1.36□□□□□ -2.19
RUNDC3AQ59EK9 AP002392.1-201ENST00000537692 208 ntBASIC1.36□□□□□ -2.19
RUNDC3AQ59EK9 U8.1-201ENST00000362843 134 ntBASIC1.35□□□□□ -2.19
RUNDC3AQ59EK9 RNU6-978P-201ENST00000364371 103 ntBASIC1.35□□□□□ -2.19
RUNDC3AQ59EK9 Y_RNA.370-201ENST00000365589 108 ntBASIC1.35□□□□□ -2.19
RUNDC3AQ59EK9 SNORA1-201ENST00000384107 130 ntBASIC1.35□□□□□ -2.19
RUNDC3AQ59EK9 Y_RNA.494-201ENST00000384432 111 ntBASIC1.35□□□□□ -2.19
RUNDC3AQ59EK9 AL354695.1-201ENST00000427935 228 ntBASIC1.35□□□□□ -2.19
RUNDC3AQ59EK9 AC245047.7-201ENST00000440265 293 ntBASIC1.35□□□□□ -2.19
RUNDC3AQ59EK9 AC087499.4-201ENST00000448505 178 ntBASIC1.35□□□□□ -2.19
RUNDC3AQ59EK9 RNU2-13P-201ENST00000515909 113 ntBASIC1.35□□□□□ -2.19
RUNDC3AQ59EK9 SNORD36C-201ENST00000516733 66 ntBASIC1.35□□□□□ -2.19
RUNDC3AQ59EK9 Y_RNA.700-201ENST00000516806 100 ntBASIC1.35□□□□□ -2.19
RUNDC3AQ59EK9 MIR4769-201ENST00000584126 77 ntBASIC1.35□□□□□ -2.19
RUNDC3AQ59EK9 AC072026.1-201ENST00000605023 201 ntBASIC1.35□□□□□ -2.19
RUNDC3AQ59EK9 AL161722.3-201ENST00000605789 2983 ntBASIC1.35□□□□□ -2.19
RUNDC3AQ59EK9 MIR8065-201ENST00000620577 100 ntBASIC1.35□□□□□ -2.19
RUNDC3AQ59EK9 RNA5SP327-201ENST00000362494 101 ntBASIC1.34□□□□□ -2.19
RUNDC3AQ59EK9 SNORA1.2-201ENST00000365189 134 ntBASIC1.34□□□□□ -2.19
RUNDC3AQ59EK9 SNORA81.3-201ENST00000517283 198 ntBASIC1.34□□□□□ -2.19
RUNDC3AQ59EK9 AC090821.2-201ENST00000523552 176 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms