Protein–RNA interactions for Protein: Q16798

ME3, NADP-dependent malic enzyme, mitochondrial, humanhuman

Predictions only

Length 604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ME3Q16798 RNU6-47P-201ENST00000383866 107 ntBASIC1.47□□□□□ -2.17
ME3Q16798 Y_RNA.785-201ENST00000384290 109 ntBASIC1.47□□□□□ -2.17
ME3Q16798 Y_RNA.486-201ENST00000384398 107 ntBASIC1.47□□□□□ -2.17
ME3Q16798 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.47□□□□□ -2.17
ME3Q16798 Y_RNA.622-201ENST00000411091 108 ntBASIC1.47□□□□□ -2.17
ME3Q16798 Y_RNA.793-201ENST00000411222 111 ntBASIC1.47□□□□□ -2.17
ME3Q16798 SNRPGP8-201ENST00000454064 226 ntBASIC1.47□□□□□ -2.17
ME3Q16798 AC108210.2-201ENST00000503681 201 ntBASIC1.47□□□□□ -2.17
ME3Q16798 Y_RNA.797-201ENST00000515977 94 ntBASIC1.47□□□□□ -2.17
ME3Q16798 RNU6-902P-201ENST00000517212 91 ntBASIC1.47□□□□□ -2.17
ME3Q16798 AC109810.1-201ENST00000534066 224 ntBASIC1.47□□□□□ -2.17
ME3Q16798 AC090425.1-201ENST00000610007 140 ntBASIC1.47□□□□□ -2.17
ME3Q16798 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
ME3Q16798 Y_RNA.29-201ENST00000362570 113 ntBASIC1.46□□□□□ -2.18
ME3Q16798 Y_RNA.75-201ENST00000362927 97 ntBASIC1.46□□□□□ -2.18
ME3Q16798 Y_RNA.182-201ENST00000363880 111 ntBASIC1.46□□□□□ -2.18
ME3Q16798 RNU6-275P-201ENST00000364910 107 ntBASIC1.46□□□□□ -2.18
ME3Q16798 SNORD24-201ENST00000383884 75 ntBASIC1.46□□□□□ -2.18
ME3Q16798 SNORD41-201ENST00000386967 70 ntBASIC1.46□□□□□ -2.18
ME3Q16798 SNORA79-201ENST00000408376 140 ntBASIC1.46□□□□□ -2.18
ME3Q16798 RNU2-70P-201ENST00000410718 179 ntBASIC1.46□□□□□ -2.18
ME3Q16798 RPS27P16-201ENST00000425758 201 ntBASIC1.46□□□□□ -2.18
ME3Q16798 RNU7-95P-201ENST00000459222 64 ntBASIC1.46□□□□□ -2.18
ME3Q16798 RPL30P7-201ENST00000479312 323 ntBASIC1.46□□□□□ -2.18
ME3Q16798 RNU6-197P-201ENST00000516680 100 ntBASIC1.46□□□□□ -2.18
ME3Q16798 RNU6-922P-201ENST00000516753 99 ntBASIC1.46□□□□□ -2.18
ME3Q16798 RNU1-92P-201ENST00000517017 135 ntBASIC1.46□□□□□ -2.18
ME3Q16798 RNU6-365P-201ENST00000517113 106 ntBASIC1.46□□□□□ -2.18
ME3Q16798 AC072026.1-201ENST00000605023 201 ntBASIC1.46□□□□□ -2.18
ME3Q16798 Y_RNA.233-201ENST00000364407 101 ntBASIC1.45□□□□□ -2.18
ME3Q16798 Y_RNA.634-201ENST00000364811 113 ntBASIC1.45□□□□□ -2.18
ME3Q16798 MIR548O-201ENST00000408583 114 ntBASIC1.45□□□□□ -2.18
ME3Q16798 AL121914.1-201ENST00000450188 156 ntBASIC1.45□□□□□ -2.18
ME3Q16798 RNU6-561P-201ENST00000516222 102 ntBASIC1.45□□□□□ -2.18
ME3Q16798 AL357312.1-201ENST00000603879 298 ntBASIC1.45□□□□□ -2.18
ME3Q16798 GHRLOS.1-201ENST00000610995 70 ntBASIC1.45□□□□□ -2.18
ME3Q16798 AC015726.2-201ENST00000620112 122 ntBASIC1.45□□□□□ -2.18
ME3Q16798 Y_RNA.66-201ENST00000362862 102 ntBASIC1.44□□□□□ -2.18
ME3Q16798 Y_RNA.412-201ENST00000384001 104 ntBASIC1.44□□□□□ -2.18
ME3Q16798 Y_RNA.666-201ENST00000516187 112 ntBASIC1.44□□□□□ -2.18
ME3Q16798 RNU7-25P-201ENST00000516544 62 ntBASIC1.44□□□□□ -2.18
ME3Q16798 RNU6-504P-201ENST00000516568 104 ntBASIC1.44□□□□□ -2.18
ME3Q16798 SNORA81.3-201ENST00000517283 198 ntBASIC1.44□□□□□ -2.18
ME3Q16798 MRPS18CP4-201ENST00000535821 231 ntBASIC1.44□□□□□ -2.18
ME3Q16798 AP002392.1-201ENST00000537692 208 ntBASIC1.44□□□□□ -2.18
ME3Q16798 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.43□□□□□ -2.18
ME3Q16798 RNA5SP432-201ENST00000362480 116 ntBASIC1.43□□□□□ -2.18
ME3Q16798 RNU6-888P-201ENST00000363010 101 ntBASIC1.43□□□□□ -2.18
ME3Q16798 Y_RNA.91-201ENST00000363042 107 ntBASIC1.43□□□□□ -2.18
ME3Q16798 AC108667.1-201ENST00000428618 249 ntBASIC1.43□□□□□ -2.18
ME3Q16798 AC108059.2-201ENST00000434626 151 ntBASIC1.43□□□□□ -2.18
ME3Q16798 RNU7-120P-201ENST00000459334 63 ntBASIC1.43□□□□□ -2.18
ME3Q16798 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.43□□□□□ -2.18
ME3Q16798 SNORA74.3-201ENST00000517108 154 ntBASIC1.43□□□□□ -2.18
ME3Q16798 AL512310.8-201ENST00000550183 120 ntBASIC1.43□□□□□ -2.18
ME3Q16798 MIR3664-201ENST00000579074 99 ntBASIC1.43□□□□□ -2.18
ME3Q16798 AL512598.1-201ENST00000610158 273 ntBASIC1.43□□□□□ -2.18
ME3Q16798 AL121890.5-201ENST00000620848 304 ntBASIC1.43□□□□□ -2.18
ME3Q16798 RNA5SP99-201ENST00000364020 114 ntBASIC1.42□□□□□ -2.18
ME3Q16798 Y_RNA.547-201ENST00000384654 119 ntBASIC1.42□□□□□ -2.18
ME3Q16798 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.42□□□□□ -2.18
ME3Q16798 RNU6-955P-201ENST00000410497 104 ntBASIC1.42□□□□□ -2.18
ME3Q16798 SNORD123-201ENST00000459473 70 ntBASIC1.42□□□□□ -2.18
ME3Q16798 RNU4-57P-201ENST00000515980 135 ntBASIC1.42□□□□□ -2.18
ME3Q16798 SNORD111.1-201ENST00000516421 86 ntBASIC1.42□□□□□ -2.18
ME3Q16798 MIR4769-201ENST00000584126 77 ntBASIC1.42□□□□□ -2.18
ME3Q16798 U6.106-201ENST00000636360 105 ntBASIC1.42□□□□□ -2.18
ME3Q16798 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.42□□□□□ -2.18
ME3Q16798 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
ME3Q16798 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
ME3Q16798 Y_RNA.23-201ENST00000362496 106 ntBASIC1.41□□□□□ -2.18
ME3Q16798 SNORD61-201ENST00000384252 73 ntBASIC1.41□□□□□ -2.18
ME3Q16798 MIR548A2-201ENST00000384956 97 ntBASIC1.41□□□□□ -2.18
ME3Q16798 MIR518F-201ENST00000384973 87 ntBASIC1.41□□□□□ -2.18
ME3Q16798 RNU6-693P-201ENST00000516134 107 ntBASIC1.41□□□□□ -2.18
ME3Q16798 RNU6-1219P-201ENST00000516143 112 ntBASIC1.41□□□□□ -2.18
ME3Q16798 RNU7-43P-201ENST00000516554 64 ntBASIC1.41□□□□□ -2.18
ME3Q16798 SNORA18.7-201ENST00000516910 131 ntBASIC1.41□□□□□ -2.18
ME3Q16798 AC022559.1-201ENST00000520905 205 ntBASIC1.41□□□□□ -2.18
ME3Q16798 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
ME3Q16798 AL353997.5-201ENST00000618886 171 ntBASIC1.41□□□□□ -2.18
ME3Q16798 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
ME3Q16798 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.4□□□□□ -2.18
ME3Q16798 RNU6-312P-201ENST00000364629 107 ntBASIC1.4□□□□□ -2.19
ME3Q16798 RNU6-643P-201ENST00000384018 107 ntBASIC1.4□□□□□ -2.19
ME3Q16798 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
ME3Q16798 MTND5P15-201ENST00000434246 349 ntBASIC1.4□□□□□ -2.19
ME3Q16798 RNU6-237P-201ENST00000515985 71 ntBASIC1.4□□□□□ -2.19
ME3Q16798 RNU6-1270P-201ENST00000517128 108 ntBASIC1.4□□□□□ -2.19
ME3Q16798 AC007751.1-201ENST00000529260 376 ntBASIC1.4□□□□□ -2.19
ME3Q16798 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.4□□□□□ -2.19
ME3Q16798 AC004792.1-201ENST00000614523 137 ntBASIC1.4□□□□□ -2.19
ME3Q16798 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
ME3Q16798 SNORA7.1-201ENST00000363750 139 ntBASIC1.39□□□□□ -2.19
ME3Q16798 SNORD115-28-201ENST00000363931 81 ntBASIC1.39□□□□□ -2.19
ME3Q16798 MIR150-201ENST00000385048 84 ntBASIC1.39□□□□□ -2.19
ME3Q16798 U8.17-201ENST00000391292 132 ntBASIC1.39□□□□□ -2.19
ME3Q16798 RNU6-182P-201ENST00000516970 105 ntBASIC1.39□□□□□ -2.19
ME3Q16798 MIR4431-201ENST00000579990 94 ntBASIC1.39□□□□□ -2.19
ME3Q16798 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms