Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AL513534.2-201ENST00000603836 250 ntBASIC1.43□□□□□ -2.18
EFNB3Q15768 FTX_2.1-201ENST00000618816 94 ntBASIC1.43□□□□□ -2.18
EFNB3Q15768 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
EFNB3Q15768 RNU6-682P-201ENST00000363843 106 ntBASIC1.42□□□□□ -2.18
EFNB3Q15768 RNU6-643P-201ENST00000384018 107 ntBASIC1.42□□□□□ -2.18
EFNB3Q15768 RNU1-78P-201ENST00000391248 165 ntBASIC1.42□□□□□ -2.18
EFNB3Q15768 MIR548O-201ENST00000408583 114 ntBASIC1.42□□□□□ -2.18
EFNB3Q15768 AC005840.1-201ENST00000498412 377 ntBASIC1.42□□□□□ -2.18
EFNB3Q15768 RNU6-917P-201ENST00000516294 104 ntBASIC1.42□□□□□ -2.18
EFNB3Q15768 MIR4431-201ENST00000579990 94 ntBASIC1.42□□□□□ -2.18
EFNB3Q15768 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.42□□□□□ -2.18
EFNB3Q15768 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
EFNB3Q15768 Y_RNA.91-201ENST00000363042 107 ntBASIC1.41□□□□□ -2.18
EFNB3Q15768 Y_RNA.150-201ENST00000363562 102 ntBASIC1.41□□□□□ -2.18
EFNB3Q15768 SNORD48-201ENST00000364953 64 ntBASIC1.41□□□□□ -2.18
EFNB3Q15768 MIR516B2-201ENST00000385190 85 ntBASIC1.41□□□□□ -2.18
EFNB3Q15768 AL451046.2-201ENST00000403074 277 ntBASIC1.41□□□□□ -2.18
EFNB3Q15768 SNX2P2-201ENST00000424553 323 ntBASIC1.41□□□□□ -2.18
EFNB3Q15768 AC027119.1-201ENST00000440877 241 ntBASIC1.41□□□□□ -2.18
EFNB3Q15768 AC245517.4-201ENST00000448601 281 ntBASIC1.41□□□□□ -2.18
EFNB3Q15768 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.41□□□□□ -2.18
EFNB3Q15768 Y_RNA.666-201ENST00000516187 112 ntBASIC1.41□□□□□ -2.18
EFNB3Q15768 FAM106DP-201ENST00000586416 501 ntBASIC1.41□□□□□ -2.18
EFNB3Q15768 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.41□□□□□ -2.18
EFNB3Q15768 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
EFNB3Q15768 Y_RNA.66-201ENST00000362862 102 ntBASIC1.4□□□□□ -2.19
EFNB3Q15768 RNU6-888P-201ENST00000363010 101 ntBASIC1.4□□□□□ -2.19
EFNB3Q15768 RNU6-886P-201ENST00000384319 105 ntBASIC1.4□□□□□ -2.19
EFNB3Q15768 AC006461.1-201ENST00000412637 326 ntBASIC1.4□□□□□ -2.19
EFNB3Q15768 SEPT7P4-201ENST00000437076 306 ntBASIC1.4□□□□□ -2.19
EFNB3Q15768 RNU1-98P-201ENST00000458992 160 ntBASIC1.4□□□□□ -2.19
EFNB3Q15768 RNA5SP445-201ENST00000515889 115 ntBASIC1.4□□□□□ -2.19
EFNB3Q15768 MIR3937-201ENST00000580135 106 ntBASIC1.4□□□□□ -2.19
EFNB3Q15768 AL365434.2-201ENST00000607979 234 ntBASIC1.4□□□□□ -2.19
EFNB3Q15768 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.4□□□□□ -2.19
EFNB3Q15768 AC015726.2-201ENST00000620112 122 ntBASIC1.4□□□□□ -2.19
EFNB3Q15768 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.39□□□□□ -2.19
EFNB3Q15768 SNORD61-201ENST00000384252 73 ntBASIC1.39□□□□□ -2.19
EFNB3Q15768 Y_RNA.521-201ENST00000384560 114 ntBASIC1.39□□□□□ -2.19
EFNB3Q15768 Y_RNA.547-201ENST00000384654 119 ntBASIC1.39□□□□□ -2.19
EFNB3Q15768 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.39□□□□□ -2.19
EFNB3Q15768 SNORA17.3-201ENST00000391159 129 ntBASIC1.39□□□□□ -2.19
EFNB3Q15768 AC108667.1-201ENST00000428618 249 ntBASIC1.39□□□□□ -2.19
EFNB3Q15768 AC107027.2-201ENST00000512197 115 ntBASIC1.39□□□□□ -2.19
EFNB3Q15768 RNU6-693P-201ENST00000516134 107 ntBASIC1.39□□□□□ -2.19
EFNB3Q15768 RNU7-25P-201ENST00000516544 62 ntBASIC1.39□□□□□ -2.19
EFNB3Q15768 MIR378D2-201ENST00000580636 98 ntBASIC1.39□□□□□ -2.19
EFNB3Q15768 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
EFNB3Q15768 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.39□□□□□ -2.19
EFNB3Q15768 Y_RNA.140-201ENST00000363474 103 ntBASIC1.38□□□□□ -2.19
EFNB3Q15768 Y_RNA.555-201ENST00000384673 110 ntBASIC1.38□□□□□ -2.19
EFNB3Q15768 RPL30P7-201ENST00000479312 323 ntBASIC1.38□□□□□ -2.19
EFNB3Q15768 SNORD116-25-201ENST00000516517 92 ntBASIC1.38□□□□□ -2.19
EFNB3Q15768 RNU6-922P-201ENST00000516753 99 ntBASIC1.38□□□□□ -2.19
EFNB3Q15768 SNORA74.3-201ENST00000517108 154 ntBASIC1.38□□□□□ -2.19
EFNB3Q15768 AC019176.1-201ENST00000518519 225 ntBASIC1.38□□□□□ -2.19
EFNB3Q15768 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.38□□□□□ -2.19
EFNB3Q15768 AL357312.1-201ENST00000603879 298 ntBASIC1.38□□□□□ -2.19
EFNB3Q15768 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
EFNB3Q15768 SNORA1.2-201ENST00000365189 134 ntBASIC1.37□□□□□ -2.19
EFNB3Q15768 Y_RNA.337-201ENST00000365312 102 ntBASIC1.37□□□□□ -2.19
EFNB3Q15768 RNU6-209P-201ENST00000384118 107 ntBASIC1.37□□□□□ -2.19
EFNB3Q15768 Y_RNA.441-201ENST00000384123 112 ntBASIC1.37□□□□□ -2.19
EFNB3Q15768 RNU6-997P-201ENST00000384725 107 ntBASIC1.37□□□□□ -2.19
EFNB3Q15768 MIR518F-201ENST00000384973 87 ntBASIC1.37□□□□□ -2.19
EFNB3Q15768 MT-TR-201ENST00000387439 65 ntBASIC1.37□□□□□ -2.19
EFNB3Q15768 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
EFNB3Q15768 RNU6-239P-201ENST00000390990 99 ntBASIC1.37□□□□□ -2.19
EFNB3Q15768 AC087499.4-201ENST00000448505 178 ntBASIC1.37□□□□□ -2.19
EFNB3Q15768 AC074198.2-201ENST00000508153 258 ntBASIC1.37□□□□□ -2.19
EFNB3Q15768 RNU6-1270P-201ENST00000517128 108 ntBASIC1.37□□□□□ -2.19
EFNB3Q15768 SNORD53B-201ENST00000577887 78 ntBASIC1.37□□□□□ -2.19
EFNB3Q15768 GHRLOS.1-201ENST00000610995 70 ntBASIC1.37□□□□□ -2.19
EFNB3Q15768 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
EFNB3Q15768 SNORD115-28-201ENST00000363931 81 ntBASIC1.36□□□□□ -2.19
EFNB3Q15768 RNA5SP363-201ENST00000365072 115 ntBASIC1.36□□□□□ -2.19
EFNB3Q15768 MIR548A2-201ENST00000384956 97 ntBASIC1.36□□□□□ -2.19
EFNB3Q15768 MIR517C-201ENST00000385103 95 ntBASIC1.36□□□□□ -2.19
EFNB3Q15768 SNORD41-201ENST00000386967 70 ntBASIC1.36□□□□□ -2.19
EFNB3Q15768 U8.17-201ENST00000391292 132 ntBASIC1.36□□□□□ -2.19
EFNB3Q15768 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.36□□□□□ -2.19
EFNB3Q15768 SNORD123-201ENST00000459473 70 ntBASIC1.36□□□□□ -2.19
EFNB3Q15768 RNU4-57P-201ENST00000515980 135 ntBASIC1.36□□□□□ -2.19
EFNB3Q15768 RNU7-43P-201ENST00000516554 64 ntBASIC1.36□□□□□ -2.19
EFNB3Q15768 RNU6-902P-201ENST00000517212 91 ntBASIC1.36□□□□□ -2.19
EFNB3Q15768 AC007751.1-201ENST00000529260 376 ntBASIC1.36□□□□□ -2.19
EFNB3Q15768 BX248123.2-201ENST00000606318 124 ntBASIC1.36□□□□□ -2.19
EFNB3Q15768 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
EFNB3Q15768 AC134878.1-201ENST00000619901 243 ntBASIC1.36□□□□□ -2.19
EFNB3Q15768 AL161722.3-201ENST00000605789 2983 ntBASIC1.36□□□□□ -2.19
EFNB3Q15768 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
EFNB3Q15768 Y_RNA.180-201ENST00000363867 113 ntBASIC1.35□□□□□ -2.19
EFNB3Q15768 RNU4-84P-201ENST00000364200 139 ntBASIC1.35□□□□□ -2.19
EFNB3Q15768 RNU6-978P-201ENST00000364371 103 ntBASIC1.35□□□□□ -2.19
EFNB3Q15768 Y_RNA.542-201ENST00000384641 111 ntBASIC1.35□□□□□ -2.19
EFNB3Q15768 RNU6-1135P-201ENST00000411083 103 ntBASIC1.35□□□□□ -2.19
EFNB3Q15768 SNORA18.7-201ENST00000516910 131 ntBASIC1.35□□□□□ -2.19
EFNB3Q15768 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.35□□□□□ -2.19
EFNB3Q15768 AP001485.1-201ENST00000604799 199 ntBASIC1.35□□□□□ -2.19
EFNB3Q15768 AC104465.1-201ENST00000611365 139 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 207.9 ms