Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 MIR517B-201ENST00000385102 67 ntBASIC-1.64□□□□□ -2.67
CPSF1Q10570 USP9YP16-201ENST00000430287 407 ntBASIC-1.64□□□□□ -2.67
CPSF1Q10570 MIR3179-1-201ENST00000578940 84 ntBASIC-1.64□□□□□ -2.67
CPSF1Q10570 MIR3179-2-201ENST00000579107 84 ntBASIC-1.64□□□□□ -2.67
CPSF1Q10570 MIR3179-3-201ENST00000579566 84 ntBASIC-1.64□□□□□ -2.67
CPSF1Q10570 MIR3179-4-201ENST00000617599 84 ntBASIC-1.64□□□□□ -2.67
CPSF1Q10570 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.65□□□□□ -2.67
CPSF1Q10570 RNU6-1200P-201ENST00000384162 107 ntBASIC-1.65□□□□□ -2.67
CPSF1Q10570 Y_RNA.547-201ENST00000384654 119 ntBASIC-1.65□□□□□ -2.67
CPSF1Q10570 SNORA40.5-201ENST00000391061 128 ntBASIC-1.65□□□□□ -2.67
CPSF1Q10570 RNU6-1001P-201ENST00000411265 100 ntBASIC-1.65□□□□□ -2.67
CPSF1Q10570 RNU7-180P-201ENST00000459240 63 ntBASIC-1.65□□□□□ -2.67
CPSF1Q10570 RNU6-189P-201ENST00000516120 101 ntBASIC-1.65□□□□□ -2.67
CPSF1Q10570 MIR1246-201ENST00000636535 73 ntBASIC-1.65□□□□□ -2.67
CPSF1Q10570 RNA5SP403-201ENST00000363598 108 ntBASIC-1.66□□□□□ -2.67
CPSF1Q10570 SNORD115-30-201ENST00000364117 82 ntBASIC-1.66□□□□□ -2.67
CPSF1Q10570 SNORD114-29-201ENST00000364819 70 ntBASIC-1.66□□□□□ -2.67
CPSF1Q10570 SNORD56B-201ENST00000384713 71 ntBASIC-1.66□□□□□ -2.67
CPSF1Q10570 MIR518B-201ENST00000385127 83 ntBASIC-1.66□□□□□ -2.67
CPSF1Q10570 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-1.66□□□□□ -2.67
CPSF1Q10570 RNU6-1012P-201ENST00000516606 109 ntBASIC-1.66□□□□□ -2.67
CPSF1Q10570 AC007671.2-201ENST00000637344 619 ntBASIC-1.66□□□□□ -2.67
CPSF1Q10570 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.66□□□□□ -2.68
CPSF1Q10570 RNU6-1209P-201ENST00000363655 107 ntBASIC-1.66□□□□□ -2.68
CPSF1Q10570 RNU4-28P-201ENST00000364739 141 ntBASIC-1.66□□□□□ -2.68
CPSF1Q10570 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.66□□□□□ -2.68
CPSF1Q10570 RNU6-702P-201ENST00000364982 107 ntBASIC-1.66□□□□□ -2.68
CPSF1Q10570 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.66□□□□□ -2.68
CPSF1Q10570 RNU6-790P-201ENST00000384479 105 ntBASIC-1.66□□□□□ -2.68
CPSF1Q10570 RNU6-192P-201ENST00000391253 100 ntBASIC-1.66□□□□□ -2.68
CPSF1Q10570 AL603910.2-201ENST00000407268 136 ntBASIC-1.66□□□□□ -2.68
CPSF1Q10570 RPL30P15-201ENST00000457129 321 ntBASIC-1.66□□□□□ -2.68
CPSF1Q10570 RNU6-625P-201ENST00000459412 107 ntBASIC-1.66□□□□□ -2.68
CPSF1Q10570 MIR5591-201ENST00000578248 65 ntBASIC-1.66□□□□□ -2.68
CPSF1Q10570 MIR5692C1-201ENST00000585309 91 ntBASIC-1.66□□□□□ -2.68
CPSF1Q10570 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.66□□□□□ -2.68
CPSF1Q10570 AC103705.1-201ENST00000619013 241 ntBASIC-1.66□□□□□ -2.68
CPSF1Q10570 RNY4P6-201ENST00000363667 96 ntBASIC-1.67□□□□□ -2.68
CPSF1Q10570 SNORD72-201ENST00000390994 80 ntBASIC-1.67□□□□□ -2.68
CPSF1Q10570 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.67□□□□□ -2.68
CPSF1Q10570 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.67□□□□□ -2.68
CPSF1Q10570 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.67□□□□□ -2.68
CPSF1Q10570 AC021146.9-201ENST00000512503 156 ntBASIC-1.67□□□□□ -2.68
CPSF1Q10570 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-1.67□□□□□ -2.68
CPSF1Q10570 RNU6-175P-201ENST00000516896 107 ntBASIC-1.67□□□□□ -2.68
CPSF1Q10570 AC026421.1-201ENST00000519101 163 ntBASIC-1.67□□□□□ -2.68
CPSF1Q10570 RNU6-456P-201ENST00000384493 107 ntBASIC-1.68□□□□□ -2.68
CPSF1Q10570 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.68□□□□□ -2.68
CPSF1Q10570 MTND3P23-201ENST00000431980 347 ntBASIC-1.68□□□□□ -2.68
CPSF1Q10570 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-1.68□□□□□ -2.68
CPSF1Q10570 CCDC34P1-201ENST00000507441 517 ntBASIC-1.68□□□□□ -2.68
CPSF1Q10570 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.68□□□□□ -2.68
CPSF1Q10570 MIR4999-201ENST00000585029 91 ntBASIC-1.68□□□□□ -2.68
CPSF1Q10570 AC018714.1-201ENST00000605028 208 ntBASIC-1.68□□□□□ -2.68
CPSF1Q10570 AC073534.2-201ENST00000620377 381 ntBASIC-1.68□□□□□ -2.68
CPSF1Q10570 RNU6-82P-201ENST00000363970 107 ntBASIC-1.69□□□□□ -2.68
CPSF1Q10570 RNU6-195P-201ENST00000411352 109 ntBASIC-1.69□□□□□ -2.68
CPSF1Q10570 AC074085.1-201ENST00000413598 418 ntBASIC-1.69□□□□□ -2.68
CPSF1Q10570 USP9YP23-201ENST00000455085 407 ntBASIC-1.69□□□□□ -2.68
CPSF1Q10570 RNU7-25P-201ENST00000516544 62 ntBASIC-1.69□□□□□ -2.68
CPSF1Q10570 POLR3GP2-201ENST00000588366 668 ntBASIC-1.69□□□□□ -2.68
CPSF1Q10570 AL158050.2-201ENST00000605336 568 ntBASIC-1.69□□□□□ -2.68
CPSF1Q10570 AC009161.2-201ENST00000624626 138 ntBASIC-1.69□□□□□ -2.68
CPSF1Q10570 RNU5F-7P-201ENST00000363696 115 ntBASIC-1.7□□□□□ -2.68
CPSF1Q10570 SNORD115-44-201ENST00000365391 82 ntBASIC-1.7□□□□□ -2.68
CPSF1Q10570 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.7□□□□□ -2.68
CPSF1Q10570 RNU4-55P-201ENST00000410731 137 ntBASIC-1.7□□□□□ -2.68
CPSF1Q10570 USMG5P1-201ENST00000425964 177 ntBASIC-1.7□□□□□ -2.68
CPSF1Q10570 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.7□□□□□ -2.68
CPSF1Q10570 TPTE2P5-203ENST00000458118 728 ntBASIC-1.7□□□□□ -2.68
CPSF1Q10570 AC141846.1-201ENST00000568348 142 ntBASIC-1.7□□□□□ -2.68
CPSF1Q10570 MIR5696-201ENST00000578474 85 ntBASIC-1.7□□□□□ -2.68
CPSF1Q10570 AC124312.5-201ENST00000604451 268 ntBASIC-1.7□□□□□ -2.68
CPSF1Q10570 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-1.7□□□□□ -2.68
CPSF1Q10570 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.71□□□□□ -2.68
CPSF1Q10570 RNU6-949P-201ENST00000384040 107 ntBASIC-1.71□□□□□ -2.68
CPSF1Q10570 SNORA27-201ENST00000384323 126 ntBASIC-1.71□□□□□ -2.68
CPSF1Q10570 RNU6-601P-201ENST00000384540 107 ntBASIC-1.71□□□□□ -2.68
CPSF1Q10570 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.71□□□□□ -2.68
CPSF1Q10570 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.71□□□□□ -2.68
CPSF1Q10570 RNU2-61P-201ENST00000411069 191 ntBASIC-1.71□□□□□ -2.68
CPSF1Q10570 CYCSP46-201ENST00000423569 204 ntBASIC-1.71□□□□□ -2.68
CPSF1Q10570 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.71□□□□□ -2.68
CPSF1Q10570 AL356010.1-201ENST00000456364 102 ntBASIC-1.71□□□□□ -2.68
CPSF1Q10570 RPS29P24-201ENST00000486345 171 ntBASIC-1.71□□□□□ -2.68
CPSF1Q10570 RNU7-116P-201ENST00000516940 62 ntBASIC-1.71□□□□□ -2.68
CPSF1Q10570 AP002963.1-201ENST00000530590 184 ntBASIC-1.71□□□□□ -2.68
CPSF1Q10570 DEFB131E-201ENST00000532329 154 ntBASIC-1.71□□□□□ -2.68
CPSF1Q10570 MIR5188-201ENST00000583467 113 ntBASIC-1.71□□□□□ -2.68
CPSF1Q10570 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.72□□□□□ -2.68
CPSF1Q10570 RNU4-58P-201ENST00000363192 141 ntBASIC-1.72□□□□□ -2.68
CPSF1Q10570 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.72□□□□□ -2.68
CPSF1Q10570 Y_RNA.405-201ENST00000383979 100 ntBASIC-1.72□□□□□ -2.68
CPSF1Q10570 Y_RNA.451-201ENST00000384200 100 ntBASIC-1.72□□□□□ -2.68
CPSF1Q10570 Y_RNA.524-201ENST00000384564 100 ntBASIC-1.72□□□□□ -2.68
CPSF1Q10570 Y_RNA.561-201ENST00000384694 100 ntBASIC-1.72□□□□□ -2.68
CPSF1Q10570 MIR147A-201ENST00000385079 72 ntBASIC-1.72□□□□□ -2.68
CPSF1Q10570 SNORD77.3-201ENST00000391113 65 ntBASIC-1.72□□□□□ -2.68
CPSF1Q10570 AL031003.1-201ENST00000404229 172 ntBASIC-1.72□□□□□ -2.68
CPSF1Q10570 EIF1P2-201ENST00000428233 350 ntBASIC-1.72□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 232.8 ms