Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 AL356055.1-201ENST00000602528 446 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 AL133255.1-201ENST00000606374 441 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 U2.17-201ENST00000611454 95 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 AL133173.2-201ENST00000614270 90 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 AP001282.2-201ENST00000616149 309 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 AL445584.3-201ENST00000617173 78 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 AC127459.3-201ENST00000624328 466 ntBASIC-0.19□□□□□ -2.44
COL7A1Q02388 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.19□□□□□ -2.44
COL7A1Q02388 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 RNU6-179P-201ENST00000363350 107 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 Y_RNA.186-201ENST00000363899 92 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 RNU6-280P-201ENST00000364145 104 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 RNU6-407P-201ENST00000365280 104 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 Y_RNA.339-201ENST00000365325 102 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 RNU6-169P-201ENST00000365336 107 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 Y_RNA.511-201ENST00000384514 103 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 MIR9-2-201ENST00000384838 87 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 MT-TM-201ENST00000387377 68 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 SNORD77.3-201ENST00000391113 65 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 MTATP6P20-201ENST00000414147 562 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.2□□□□□ -2.44
COL7A1Q02388 AC243428.1-201ENST00000421099 264 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 HMGN2P32-201ENST00000444648 269 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 UBE2V1P12-201ENST00000503954 474 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.2□□□□□ -2.44
COL7A1Q02388 RNU6-276P-201ENST00000516114 96 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 RNU7-13P-201ENST00000516413 62 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 SNORD45.4-201ENST00000516629 73 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 SNORD36C-201ENST00000516733 66 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 AC022616.6-201ENST00000520479 119 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 AC022616.4-201ENST00000522985 181 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 MIR3684-201ENST00000579779 74 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 AC008507.2-201ENST00000588402 1176 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 AC021443.1-201ENST00000604478 211 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 AC019193.3-201ENST00000609144 554 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 AL607023.1-201ENST00000620045 248 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 AC097520.1-201ENST00000624435 385 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 AL589826.1-201ENST00000340697 249 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 RNU6-899P-201ENST00000363947 107 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 SNORA63C-201ENST00000364578 129 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 RNU6-312P-201ENST00000364629 107 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 RNU4-66P-201ENST00000365199 138 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 RNU6-571P-201ENST00000384128 107 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 RNU6-601P-201ENST00000384540 107 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 MIR563-201ENST00000385080 79 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 MTCO3P40-201ENST00000392516 676 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 RNU6-757P-201ENST00000410334 100 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 SSR1P2-201ENST00000415208 787 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 AC104850.1-201ENST00000435940 476 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 RNU6-329P-201ENST00000459618 107 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 RNU6-830P-201ENST00000516353 107 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 SNORD38.3-201ENST00000516599 73 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 SNORA25.16-201ENST00000516741 121 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 RNU6-410P-201ENST00000517006 107 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 RNU6-706P-201ENST00000517229 104 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 AL442663.2-201ENST00000554385 511 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 MIR3139-201ENST00000579145 76 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 MIR4775-201ENST00000581168 75 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-0.2□□□□□ -2.44
COL7A1Q02388 MIR5704-201ENST00000584029 77 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 AC138207.3-201ENST00000585289 166 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.2□□□□□ -2.44
COL7A1Q02388 AL353803.5-201ENST00000599815 141 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 AC006566.1-201ENST00000608943 513 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 AC092954.2-201ENST00000609103 430 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 MIR1244-1-201ENST00000612829 85 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 MIR1244-3-201ENST00000635744 85 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 MIR1244-2-201ENST00000636449 85 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 MIR1244-4-202ENST00000636813 85 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 RNY1P12-201ENST00000364251 105 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 SNORD115-23-201ENST00000364461 82 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 RNU6-621P-201ENST00000364752 109 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 SNORD115-44-201ENST00000365391 82 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 SNORA2.2-201ENST00000365473 135 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 RNU6-901P-201ENST00000384593 106 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 MIR215-201ENST00000384858 110 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 MIR626-201ENST00000385032 94 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 MIR517B-201ENST00000385102 67 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 SNORA3B-201ENST00000391305 131 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 RNA5SP261-201ENST00000410536 106 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 AC016907.1-201ENST00000419483 435 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 AC244505.6-201ENST00000452829 130 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 AL138752.1-201ENST00000452964 351 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 MTND1P11-201ENST00000456661 876 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 RNU2-13P-201ENST00000515909 113 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 RNU6-966P-201ENST00000516479 104 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 Vault.3-201ENST00000516676 95 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 RNU1-117P-201ENST00000517041 158 ntBASIC-0.2□□□□□ -2.44
COL7A1Q02388 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 195 ms