Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 MTCO2P16-201ENST00000436962 677 ntBASIC-1.56□□□□□ -2.66
UBA52P62987 snoU13.13-201ENST00000458842 104 ntBASIC-1.56□□□□□ -2.66
UBA52P62987 AC022137.1-201ENST00000483735 151 ntBASIC-1.56□□□□□ -2.66
UBA52P62987 RNU6-1114P-201ENST00000516022 107 ntBASIC-1.56□□□□□ -2.66
UBA52P62987 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.56□□□□□ -2.66
UBA52P62987 AC022878.1-201ENST00000530684 149 ntBASIC-1.56□□□□□ -2.66
UBA52P62987 AC124312.5-201ENST00000604451 268 ntBASIC-1.56□□□□□ -2.66
UBA52P62987 AC092807.2-201ENST00000609367 243 ntBASIC-1.56□□□□□ -2.66
UBA52P62987 AL163152.1-201ENST00000642001 374 ntBASIC-1.56□□□□□ -2.66
UBA52P62987 RNU6-1209P-201ENST00000363655 107 ntBASIC-1.57□□□□□ -2.66
UBA52P62987 RNU6-949P-201ENST00000384040 107 ntBASIC-1.57□□□□□ -2.66
UBA52P62987 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.57□□□□□ -2.66
UBA52P62987 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.57□□□□□ -2.66
UBA52P62987 SNORD64-201ENST00000386683 67 ntBASIC-1.57□□□□□ -2.66
UBA52P62987 AC074085.1-201ENST00000413598 418 ntBASIC-1.57□□□□□ -2.66
UBA52P62987 RNU7-180P-201ENST00000459240 63 ntBASIC-1.57□□□□□ -2.66
UBA52P62987 DEFB131E-201ENST00000532329 154 ntBASIC-1.57□□□□□ -2.66
UBA52P62987 AC006566.1-201ENST00000608943 513 ntBASIC-1.57□□□□□ -2.66
UBA52P62987 HULC.1-201ENST00000612720 240 ntBASIC-1.57□□□□□ -2.66
UBA52P62987 uc_338.10-201ENST00000621872 182 ntBASIC-1.57□□□□□ -2.66
UBA52P62987 SNORD24-201ENST00000383884 75 ntBASIC-1.58□□□□□ -2.66
UBA52P62987 RNU6-1145P-201ENST00000384246 107 ntBASIC-1.58□□□□□ -2.66
UBA52P62987 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.58□□□□□ -2.66
UBA52P62987 RNU6-601P-201ENST00000384540 107 ntBASIC-1.58□□□□□ -2.66
UBA52P62987 MIR147A-201ENST00000385079 72 ntBASIC-1.58□□□□□ -2.66
UBA52P62987 RNU2-61P-201ENST00000411069 191 ntBASIC-1.58□□□□□ -2.66
UBA52P62987 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.58□□□□□ -2.66
UBA52P62987 CEP57L1P1-201ENST00000430943 1201 ntBASIC-1.58□□□□□ -2.66
UBA52P62987 SNORA19.3-201ENST00000516165 130 ntBASIC-1.58□□□□□ -2.66
UBA52P62987 RNU6-531P-201ENST00000516694 104 ntBASIC-1.58□□□□□ -2.66
UBA52P62987 AP000676.1-201ENST00000533307 52 ntBASIC-1.58□□□□□ -2.66
UBA52P62987 MIR548AE1-201ENST00000583292 70 ntBASIC-1.58□□□□□ -2.66
UBA52P62987 JPX_2.1-201ENST00000614161 69 ntBASIC-1.58□□□□□ -2.66
UBA52P62987 MIR1246-201ENST00000636535 73 ntBASIC-1.58□□□□□ -2.66
UBA52P62987 MIR382-201ENST00000637119 76 ntBASIC-1.58□□□□□ -2.66
UBA52P62987 RNU1-141P-201ENST00000364623 158 ntBASIC-1.59□□□□□ -2.66
UBA52P62987 RNU6-933P-201ENST00000384424 107 ntBASIC-1.59□□□□□ -2.66
UBA52P62987 SNORA26.6-201ENST00000391256 115 ntBASIC-1.59□□□□□ -2.66
UBA52P62987 MIR548I3-201ENST00000408378 149 ntBASIC-1.59□□□□□ -2.66
UBA52P62987 RNU6-938P-201ENST00000411285 103 ntBASIC-1.59□□□□□ -2.66
UBA52P62987 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.59□□□□□ -2.66
UBA52P62987 AL158050.2-201ENST00000605336 568 ntBASIC-1.59□□□□□ -2.66
UBA52P62987 MIR7844-201ENST00000616161 122 ntBASIC-1.59□□□□□ -2.66
UBA52P62987 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-1.59□□□□□ -2.66
UBA52P62987 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.6□□□□□ -2.67
UBA52P62987 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.6□□□□□ -2.67
UBA52P62987 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.6□□□□□ -2.67
UBA52P62987 SNORA40.5-201ENST00000391061 128 ntBASIC-1.6□□□□□ -2.67
UBA52P62987 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.6□□□□□ -2.67
UBA52P62987 MTND3P23-201ENST00000431980 347 ntBASIC-1.6□□□□□ -2.67
UBA52P62987 AP000533.3-201ENST00000447704 118 ntBASIC-1.6□□□□□ -2.67
UBA52P62987 RPS29P24-201ENST00000486345 171 ntBASIC-1.6□□□□□ -2.67
UBA52P62987 MTCO2P30-201ENST00000503662 364 ntBASIC-1.6□□□□□ -2.67
UBA52P62987 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.6□□□□□ -2.67
UBA52P62987 RNA5SP33-201ENST00000516687 98 ntBASIC-1.6□□□□□ -2.67
UBA52P62987 AC145423.2-201ENST00000610631 239 ntBASIC-1.6□□□□□ -2.67
UBA52P62987 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.61□□□□□ -2.67
UBA52P62987 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.61□□□□□ -2.67
UBA52P62987 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.61□□□□□ -2.67
UBA52P62987 MIR548O-201ENST00000408583 114 ntBASIC-1.61□□□□□ -2.67
UBA52P62987 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.61□□□□□ -2.67
UBA52P62987 MTCO2P21-201ENST00000419780 677 ntBASIC-1.61□□□□□ -2.67
UBA52P62987 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-1.61□□□□□ -2.67
UBA52P62987 CHEK2P4-201ENST00000450340 246 ntBASIC-1.61□□□□□ -2.67
UBA52P62987 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.61□□□□□ -2.67
UBA52P62987 MIR5692C1-201ENST00000585309 91 ntBASIC-1.61□□□□□ -2.67
UBA52P62987 AC022441.3-201ENST00000605737 136 ntBASIC-1.61□□□□□ -2.67
UBA52P62987 RNU6-1192P-201ENST00000612197 107 ntBASIC-1.61□□□□□ -2.67
UBA52P62987 RNU6-489P-201ENST00000618289 107 ntBASIC-1.61□□□□□ -2.67
UBA52P62987 AL607023.1-201ENST00000620045 248 ntBASIC-1.61□□□□□ -2.67
UBA52P62987 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.62□□□□□ -2.67
UBA52P62987 RNU6-501P-201ENST00000364072 100 ntBASIC-1.62□□□□□ -2.67
UBA52P62987 RNU6-157P-201ENST00000383957 107 ntBASIC-1.62□□□□□ -2.67
UBA52P62987 SNORA27-201ENST00000384323 126 ntBASIC-1.62□□□□□ -2.67
UBA52P62987 RNY3P9-201ENST00000384727 106 ntBASIC-1.62□□□□□ -2.67
UBA52P62987 RNU6-192P-201ENST00000391253 100 ntBASIC-1.62□□□□□ -2.67
UBA52P62987 AL031003.1-201ENST00000404229 172 ntBASIC-1.62□□□□□ -2.67
UBA52P62987 RNU6-625P-201ENST00000459412 107 ntBASIC-1.62□□□□□ -2.67
UBA52P62987 MIR3920-201ENST00000581751 86 ntBASIC-1.62□□□□□ -2.67
UBA52P62987 Z84480.1-201ENST00000605131 311 ntBASIC-1.62□□□□□ -2.67
UBA52P62987 AC087683.2-201ENST00000611384 326 ntBASIC-1.62□□□□□ -2.67
UBA52P62987 AC103705.1-201ENST00000619013 241 ntBASIC-1.62□□□□□ -2.67
UBA52P62987 RNU6-653P-201ENST00000363074 106 ntBASIC-1.63□□□□□ -2.67
UBA52P62987 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.63□□□□□ -2.67
UBA52P62987 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.63□□□□□ -2.67
UBA52P62987 RNU6-831P-201ENST00000384548 107 ntBASIC-1.63□□□□□ -2.67
UBA52P62987 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.63□□□□□ -2.67
UBA52P62987 RNU6-276P-201ENST00000516114 96 ntBASIC-1.63□□□□□ -2.67
UBA52P62987 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-1.63□□□□□ -2.67
UBA52P62987 MIR5188-201ENST00000583467 113 ntBASIC-1.63□□□□□ -2.67
UBA52P62987 AC011603.4-201ENST00000611325 277 ntBASIC-1.63□□□□□ -2.67
UBA52P62987 AC069503.3-201ENST00000618674 145 ntBASIC-1.63□□□□□ -2.67
UBA52P62987 MIR6717-201ENST00000622747 73 ntBASIC-1.63□□□□□ -2.67
UBA52P62987 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.64□□□□□ -2.67
UBA52P62987 RNU4-58P-201ENST00000363192 141 ntBASIC-1.64□□□□□ -2.67
UBA52P62987 SNORD113-7-201ENST00000363762 77 ntBASIC-1.64□□□□□ -2.67
UBA52P62987 RNU5E-5P-201ENST00000365379 116 ntBASIC-1.64□□□□□ -2.67
UBA52P62987 RNU6-154P-201ENST00000384306 106 ntBASIC-1.64□□□□□ -2.67
UBA52P62987 EIF1P2-201ENST00000428233 350 ntBASIC-1.64□□□□□ -2.67
UBA52P62987 USP9YP16-201ENST00000430287 407 ntBASIC-1.64□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms