Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AP001485.1-201ENST00000604799 199 ntBASIC1.59□□□□□ -2.15
SEC61A1P61619 AC103810.8-201ENST00000607347 118 ntBASIC1.59□□□□□ -2.15
SEC61A1P61619 AL627230.6-201ENST00000611129 280 ntBASIC1.59□□□□□ -2.15
SEC61A1P61619 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.59□□□□□ -2.16
SEC61A1P61619 AC010332.2-201ENST00000613083 1904 ntBASIC1.58□□□□□ -2.16
SEC61A1P61619 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SEC61A1P61619 RNU6-268P-201ENST00000364174 107 ntBASIC1.58□□□□□ -2.16
SEC61A1P61619 SNORA16.1-201ENST00000364597 132 ntBASIC1.58□□□□□ -2.16
SEC61A1P61619 Y_RNA.542-201ENST00000384641 111 ntBASIC1.58□□□□□ -2.16
SEC61A1P61619 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SEC61A1P61619 MIR548O-201ENST00000408583 114 ntBASIC1.58□□□□□ -2.16
SEC61A1P61619 SNRPGP14-201ENST00000435400 219 ntBASIC1.58□□□□□ -2.16
SEC61A1P61619 SNRPGP13-201ENST00000442212 177 ntBASIC1.58□□□□□ -2.16
SEC61A1P61619 AC005908.1-201ENST00000468701 347 ntBASIC1.58□□□□□ -2.16
SEC61A1P61619 AC099513.1-201ENST00000490423 301 ntBASIC1.58□□□□□ -2.16
SEC61A1P61619 AC108210.2-201ENST00000503681 201 ntBASIC1.58□□□□□ -2.16
SEC61A1P61619 AC015712.3-201ENST00000559380 164 ntBASIC1.58□□□□□ -2.16
SEC61A1P61619 MIR3646-201ENST00000578301 84 ntBASIC1.58□□□□□ -2.16
SEC61A1P61619 AC015726.2-201ENST00000620112 122 ntBASIC1.58□□□□□ -2.16
SEC61A1P61619 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.58□□□□□ -2.16
SEC61A1P61619 AC132825.6-201ENST00000638861 357 ntBASIC1.58□□□□□ -2.16
SEC61A1P61619 RNA5SP99-201ENST00000364020 114 ntBASIC1.57□□□□□ -2.16
SEC61A1P61619 RNU6-950P-201ENST00000384651 107 ntBASIC1.57□□□□□ -2.16
SEC61A1P61619 MIR518F-201ENST00000384973 87 ntBASIC1.57□□□□□ -2.16
SEC61A1P61619 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.57□□□□□ -2.16
SEC61A1P61619 AL606753.1-201ENST00000427435 87 ntBASIC1.57□□□□□ -2.16
SEC61A1P61619 MTND4LP9-201ENST00000427694 174 ntBASIC1.57□□□□□ -2.16
SEC61A1P61619 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.57□□□□□ -2.16
SEC61A1P61619 AF228730.3-201ENST00000436691 102 ntBASIC1.57□□□□□ -2.16
SEC61A1P61619 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.57□□□□□ -2.16
SEC61A1P61619 CYCTP-201ENST00000504253 315 ntBASIC1.57□□□□□ -2.16
SEC61A1P61619 SNORA18.4-201ENST00000516440 124 ntBASIC1.57□□□□□ -2.16
SEC61A1P61619 DEFB122-202ENST00000569013 197 ntBASIC1.57□□□□□ -2.16
SEC61A1P61619 MIR4769-201ENST00000584126 77 ntBASIC1.57□□□□□ -2.16
SEC61A1P61619 AL096840.1-201ENST00000603287 93 ntBASIC1.57□□□□□ -2.16
SEC61A1P61619 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.57□□□□□ -2.16
SEC61A1P61619 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.57□□□□□ -2.16
SEC61A1P61619 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
SEC61A1P61619 U8.1-201ENST00000362843 134 ntBASIC1.56□□□□□ -2.16
SEC61A1P61619 RNU6-508P-201ENST00000363231 103 ntBASIC1.56□□□□□ -2.16
SEC61A1P61619 Y_RNA.251-201ENST00000364551 99 ntBASIC1.56□□□□□ -2.16
SEC61A1P61619 SNORD48-201ENST00000364953 64 ntBASIC1.56□□□□□ -2.16
SEC61A1P61619 SNORD50.2-201ENST00000365465 70 ntBASIC1.56□□□□□ -2.16
SEC61A1P61619 Y_RNA.547-201ENST00000384654 119 ntBASIC1.56□□□□□ -2.16
SEC61A1P61619 MIR516B2-201ENST00000385190 85 ntBASIC1.56□□□□□ -2.16
SEC61A1P61619 Y_RNA.584-201ENST00000391090 114 ntBASIC1.56□□□□□ -2.16
SEC61A1P61619 Y_RNA.586-201ENST00000391146 98 ntBASIC1.56□□□□□ -2.16
SEC61A1P61619 RPL31P63-201ENST00000422565 375 ntBASIC1.56□□□□□ -2.16
SEC61A1P61619 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.56□□□□□ -2.16
SEC61A1P61619 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.56□□□□□ -2.16
SEC61A1P61619 HMGN2P23-201ENST00000456759 269 ntBASIC1.56□□□□□ -2.16
SEC61A1P61619 RPS29P11-201ENST00000496507 171 ntBASIC1.56□□□□□ -2.16
SEC61A1P61619 Y_RNA.686-201ENST00000516548 134 ntBASIC1.56□□□□□ -2.16
SEC61A1P61619 RNA5SP481-201ENST00000516814 122 ntBASIC1.56□□□□□ -2.16
SEC61A1P61619 AC006441.5-201ENST00000612680 209 ntBASIC1.56□□□□□ -2.16
SEC61A1P61619 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
SEC61A1P61619 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.55□□□□□ -2.16
SEC61A1P61619 MTND5P32-201ENST00000560711 1802 ntBASIC1.55□□□□□ -2.16
SEC61A1P61619 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SEC61A1P61619 RNU6-888P-201ENST00000363010 101 ntBASIC1.55□□□□□ -2.16
SEC61A1P61619 Y_RNA.294-201ENST00000364916 102 ntBASIC1.55□□□□□ -2.16
SEC61A1P61619 SNORD24-201ENST00000383884 75 ntBASIC1.55□□□□□ -2.16
SEC61A1P61619 MIR9-3-201ENST00000385084 90 ntBASIC1.55□□□□□ -2.16
SEC61A1P61619 MIR891A-201ENST00000401237 79 ntBASIC1.55□□□□□ -2.16
SEC61A1P61619 RNU6-126P-201ENST00000516685 103 ntBASIC1.55□□□□□ -2.16
SEC61A1P61619 RNU6-971P-201ENST00000516920 106 ntBASIC1.55□□□□□ -2.16
SEC61A1P61619 RNU6-548P-201ENST00000517083 115 ntBASIC1.55□□□□□ -2.16
SEC61A1P61619 MIR3618-201ENST00000580330 88 ntBASIC1.55□□□□□ -2.16
SEC61A1P61619 SNORD3E-202ENST00000627253 216 ntBASIC1.55□□□□□ -2.16
SEC61A1P61619 MIR376A2-201ENST00000636782 80 ntBASIC1.55□□□□□ -2.16
SEC61A1P61619 RNU6-915P-201ENST00000364943 103 ntBASIC1.54□□□□□ -2.16
SEC61A1P61619 Y_RNA.336-201ENST00000365307 109 ntBASIC1.54□□□□□ -2.16
SEC61A1P61619 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SEC61A1P61619 SNORD77.3-201ENST00000391113 65 ntBASIC1.54□□□□□ -2.16
SEC61A1P61619 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.54□□□□□ -2.16
SEC61A1P61619 SNORA26.9-201ENST00000391322 122 ntBASIC1.54□□□□□ -2.16
SEC61A1P61619 AC015922.2-201ENST00000435593 184 ntBASIC1.54□□□□□ -2.16
SEC61A1P61619 PGBD4P5-201ENST00000445958 426 ntBASIC1.54□□□□□ -2.16
SEC61A1P61619 RNU6-1211P-201ENST00000459179 105 ntBASIC1.54□□□□□ -2.16
SEC61A1P61619 RNU5E-3P-201ENST00000515913 68 ntBASIC1.54□□□□□ -2.16
SEC61A1P61619 RNA5SP182-201ENST00000516064 82 ntBASIC1.54□□□□□ -2.16
SEC61A1P61619 MIR4419B-201ENST00000577260 68 ntBASIC1.54□□□□□ -2.16
SEC61A1P61619 AL365205.2-201ENST00000594586 68 ntBASIC1.54□□□□□ -2.16
SEC61A1P61619 AC106754.2-201ENST00000623006 233 ntBASIC1.54□□□□□ -2.16
SEC61A1P61619 AC027279.3-201ENST00000625055 122 ntBASIC1.54□□□□□ -2.16
SEC61A1P61619 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.54□□□□□ -2.16
SEC61A1P61619 MIR424-201ENST00000362227 98 ntBASIC1.53□□□□□ -2.16
SEC61A1P61619 RNU6-661P-201ENST00000362409 107 ntBASIC1.53□□□□□ -2.16
SEC61A1P61619 Y_RNA.52-201ENST00000362760 96 ntBASIC1.53□□□□□ -2.16
SEC61A1P61619 RNA5SP363-201ENST00000365072 115 ntBASIC1.53□□□□□ -2.16
SEC61A1P61619 SNORA40-201ENST00000388090 126 ntBASIC1.53□□□□□ -2.16
SEC61A1P61619 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
SEC61A1P61619 RNA5SP127-201ENST00000411051 133 ntBASIC1.53□□□□□ -2.16
SEC61A1P61619 HMGN2P32-201ENST00000444648 269 ntBASIC1.53□□□□□ -2.16
SEC61A1P61619 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.53□□□□□ -2.16
SEC61A1P61619 SNORD36C-201ENST00000516733 66 ntBASIC1.53□□□□□ -2.16
SEC61A1P61619 SUMO2P16-201ENST00000519475 264 ntBASIC1.53□□□□□ -2.16
SEC61A1P61619 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.53□□□□□ -2.16
SEC61A1P61619 AP001328.1-201ENST00000528550 176 ntBASIC1.53□□□□□ -2.16
SEC61A1P61619 MIR8081-201ENST00000611533 95 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms