Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC015726.2-201ENST00000620112 122 ntBASIC1.3□□□□□ -2.2
CLDN20P56880 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
CLDN20P56880 RNU6-1020P-201ENST00000363684 107 ntBASIC1.29□□□□□ -2.2
CLDN20P56880 SNORD45.3-201ENST00000363836 72 ntBASIC1.29□□□□□ -2.2
CLDN20P56880 Y_RNA.257-201ENST00000364596 102 ntBASIC1.29□□□□□ -2.2
CLDN20P56880 Y_RNA.435-201ENST00000384095 112 ntBASIC1.29□□□□□ -2.2
CLDN20P56880 RNU4-70P-201ENST00000384579 139 ntBASIC1.29□□□□□ -2.2
CLDN20P56880 MIR548O-201ENST00000408583 114 ntBASIC1.29□□□□□ -2.2
CLDN20P56880 RNU2-70P-201ENST00000410718 179 ntBASIC1.29□□□□□ -2.2
CLDN20P56880 RNU6-847P-201ENST00000411115 108 ntBASIC1.29□□□□□ -2.2
CLDN20P56880 SNRPGP13-201ENST00000442212 177 ntBASIC1.29□□□□□ -2.2
CLDN20P56880 RPS29P23-201ENST00000458635 123 ntBASIC1.29□□□□□ -2.2
CLDN20P56880 SNORD123-201ENST00000459473 70 ntBASIC1.29□□□□□ -2.2
CLDN20P56880 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.29□□□□□ -2.2
CLDN20P56880 Y_RNA.666-201ENST00000516187 112 ntBASIC1.29□□□□□ -2.2
CLDN20P56880 SNORD111.1-201ENST00000516421 86 ntBASIC1.29□□□□□ -2.2
CLDN20P56880 SNORA18.7-201ENST00000516910 131 ntBASIC1.29□□□□□ -2.2
CLDN20P56880 AC097639.2-201ENST00000603159 172 ntBASIC1.29□□□□□ -2.2
CLDN20P56880 AP001485.1-201ENST00000604799 199 ntBASIC1.29□□□□□ -2.2
CLDN20P56880 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
CLDN20P56880 ZNF209P-201ENST00000593450 2304 ntBASIC1.28□□□□□ -2.2
CLDN20P56880 Y_RNA.274-201ENST00000364714 101 ntBASIC1.28□□□□□ -2.2
CLDN20P56880 RNU6-200P-201ENST00000364743 107 ntBASIC1.28□□□□□ -2.2
CLDN20P56880 Y_RNA.634-201ENST00000364811 113 ntBASIC1.28□□□□□ -2.2
CLDN20P56880 SNORD24-201ENST00000383884 75 ntBASIC1.28□□□□□ -2.2
CLDN20P56880 RNU6-578P-201ENST00000390980 103 ntBASIC1.28□□□□□ -2.2
CLDN20P56880 RNU6-918P-201ENST00000391219 106 ntBASIC1.28□□□□□ -2.2
CLDN20P56880 RNU6-955P-201ENST00000410497 104 ntBASIC1.28□□□□□ -2.2
CLDN20P56880 RNU4-43P-201ENST00000410628 137 ntBASIC1.28□□□□□ -2.2
CLDN20P56880 Y_RNA.797-201ENST00000515977 94 ntBASIC1.28□□□□□ -2.2
CLDN20P56880 RN7SKP88-201ENST00000516847 250 ntBASIC1.28□□□□□ -2.2
CLDN20P56880 RNU1-92P-201ENST00000517017 135 ntBASIC1.28□□□□□ -2.2
CLDN20P56880 AC109810.1-201ENST00000534066 224 ntBASIC1.28□□□□□ -2.2
CLDN20P56880 AC108706.1-201ENST00000611053 297 ntBASIC1.28□□□□□ -2.2
CLDN20P56880 7SK.8-201ENST00000612110 250 ntBASIC1.28□□□□□ -2.2
CLDN20P56880 7SK.11-201ENST00000615477 250 ntBASIC1.28□□□□□ -2.2
CLDN20P56880 7SK.13-201ENST00000622040 250 ntBASIC1.28□□□□□ -2.2
CLDN20P56880 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.28□□□□□ -2.2
CLDN20P56880 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
CLDN20P56880 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
CLDN20P56880 Y_RNA.297-201ENST00000364950 91 ntBASIC1.27□□□□□ -2.21
CLDN20P56880 Y_RNA.547-201ENST00000384654 119 ntBASIC1.27□□□□□ -2.21
CLDN20P56880 SNORA79-201ENST00000408376 140 ntBASIC1.27□□□□□ -2.21
CLDN20P56880 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.27□□□□□ -2.21
CLDN20P56880 AL138752.1-201ENST00000452964 351 ntBASIC1.27□□□□□ -2.21
CLDN20P56880 RPL39P39-201ENST00000455840 151 ntBASIC1.27□□□□□ -2.21
CLDN20P56880 RNU7-25P-201ENST00000516544 62 ntBASIC1.27□□□□□ -2.21
CLDN20P56880 RNU7-43P-201ENST00000516554 64 ntBASIC1.27□□□□□ -2.21
CLDN20P56880 RNU6-504P-201ENST00000516568 104 ntBASIC1.27□□□□□ -2.21
CLDN20P56880 RNU6-197P-201ENST00000516680 100 ntBASIC1.27□□□□□ -2.21
CLDN20P56880 RNU6-165P-201ENST00000517170 99 ntBASIC1.27□□□□□ -2.21
CLDN20P56880 CYP3A52P-201ENST00000563326 91 ntBASIC1.27□□□□□ -2.21
CLDN20P56880 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.27□□□□□ -2.21
CLDN20P56880 AL161722.3-201ENST00000605789 2983 ntBASIC1.26□□□□□ -2.21
CLDN20P56880 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.26□□□□□ -2.21
CLDN20P56880 U8.1-201ENST00000362843 134 ntBASIC1.26□□□□□ -2.21
CLDN20P56880 Y_RNA.66-201ENST00000362862 102 ntBASIC1.26□□□□□ -2.21
CLDN20P56880 RNU6-888P-201ENST00000363010 101 ntBASIC1.26□□□□□ -2.21
CLDN20P56880 Y_RNA.182-201ENST00000363880 111 ntBASIC1.26□□□□□ -2.21
CLDN20P56880 RNU6-275P-201ENST00000364910 107 ntBASIC1.26□□□□□ -2.21
CLDN20P56880 MIR520C-201ENST00000385005 87 ntBASIC1.26□□□□□ -2.21
CLDN20P56880 U8.17-201ENST00000391292 132 ntBASIC1.26□□□□□ -2.21
CLDN20P56880 AL121914.1-201ENST00000450188 156 ntBASIC1.26□□□□□ -2.21
CLDN20P56880 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.26□□□□□ -2.21
CLDN20P56880 RNU6-138P-201ENST00000515952 107 ntBASIC1.26□□□□□ -2.21
CLDN20P56880 RNU4-57P-201ENST00000515980 135 ntBASIC1.26□□□□□ -2.21
CLDN20P56880 RNU6-561P-201ENST00000516222 102 ntBASIC1.26□□□□□ -2.21
CLDN20P56880 Y_RNA.700-201ENST00000516806 100 ntBASIC1.26□□□□□ -2.21
CLDN20P56880 MIR4421-201ENST00000578133 69 ntBASIC1.26□□□□□ -2.21
CLDN20P56880 Y_RNA.75-201ENST00000362927 97 ntBASIC1.25□□□□□ -2.21
CLDN20P56880 Y_RNA.91-201ENST00000363042 107 ntBASIC1.25□□□□□ -2.21
CLDN20P56880 SNORD61-201ENST00000384252 73 ntBASIC1.25□□□□□ -2.21
CLDN20P56880 MIR548A2-201ENST00000384956 97 ntBASIC1.25□□□□□ -2.21
CLDN20P56880 AC009474.2-201ENST00000451383 136 ntBASIC1.25□□□□□ -2.21
CLDN20P56880 Y_RNA.644-201ENST00000459006 113 ntBASIC1.25□□□□□ -2.21
CLDN20P56880 RNU6-693P-201ENST00000516134 107 ntBASIC1.25□□□□□ -2.21
CLDN20P56880 RNU6-947P-201ENST00000516264 106 ntBASIC1.25□□□□□ -2.21
CLDN20P56880 Y_RNA.674-201ENST00000516362 113 ntBASIC1.25□□□□□ -2.21
CLDN20P56880 MIR4764-201ENST00000580680 88 ntBASIC1.25□□□□□ -2.21
CLDN20P56880 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.25□□□□□ -2.21
CLDN20P56880 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CLDN20P56880 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CLDN20P56880 SNORD115-28-201ENST00000363931 81 ntBASIC1.24□□□□□ -2.21
CLDN20P56880 SNORA1.2-201ENST00000365189 134 ntBASIC1.24□□□□□ -2.21
CLDN20P56880 RNU6-47P-201ENST00000383866 107 ntBASIC1.24□□□□□ -2.21
CLDN20P56880 MIR518F-201ENST00000384973 87 ntBASIC1.24□□□□□ -2.21
CLDN20P56880 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.24□□□□□ -2.21
CLDN20P56880 AC087499.4-201ENST00000448505 178 ntBASIC1.24□□□□□ -2.21
CLDN20P56880 AC007751.1-201ENST00000529260 376 ntBASIC1.24□□□□□ -2.21
CLDN20P56880 MIR548AR-201ENST00000582191 57 ntBASIC1.24□□□□□ -2.21
CLDN20P56880 snoU13.31-201ENST00000607291 104 ntBASIC1.24□□□□□ -2.21
CLDN20P56880 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.23□□□□□ -2.21
CLDN20P56880 SNORA7.1-201ENST00000363750 139 ntBASIC1.23□□□□□ -2.21
CLDN20P56880 Y_RNA.233-201ENST00000364407 101 ntBASIC1.23□□□□□ -2.21
CLDN20P56880 Y_RNA.338-201ENST00000365320 114 ntBASIC1.23□□□□□ -2.21
CLDN20P56880 Y_RNA.412-201ENST00000384001 104 ntBASIC1.23□□□□□ -2.21
CLDN20P56880 RNU6-1067P-201ENST00000384752 107 ntBASIC1.23□□□□□ -2.21
CLDN20P56880 MIR150-201ENST00000385048 84 ntBASIC1.23□□□□□ -2.21
CLDN20P56880 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.23□□□□□ -2.21
CLDN20P56880 Y_RNA.793-201ENST00000411222 111 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms