Protein–RNA interactions for Protein: P56199

ITGA1, Integrin alpha-1, humanhuman

Predictions only

Length 1,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1P56199 SNORD38C-201ENST00000384381 69 ntBASIC2.31□□□□□ -2.04
ITGA1P56199 RNU6-554P-201ENST00000410466 106 ntBASIC2.31□□□□□ -2.04
ITGA1P56199 SNORA31.10-201ENST00000516482 106 ntBASIC2.31□□□□□ -2.04
ITGA1P56199 RNU6-1116P-201ENST00000517269 99 ntBASIC2.31□□□□□ -2.04
ITGA1P56199 AC021443.1-201ENST00000604478 211 ntBASIC2.31□□□□□ -2.04
ITGA1P56199 AC245884.12-201ENST00000615364 59 ntBASIC2.31□□□□□ -2.04
ITGA1P56199 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.3□□□□□ -2.04
ITGA1P56199 AP006437.1-201ENST00000641440 3685 ntBASIC2.3□□□□□ -2.04
ITGA1P56199 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
ITGA1P56199 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
ITGA1P56199 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
ITGA1P56199 ICE2P2-201ENST00000483823 2787 ntBASIC2.3□□□□□ -2.04
ITGA1P56199 Y_RNA.213-201ENST00000364178 111 ntBASIC2.3□□□□□ -2.04
ITGA1P56199 Y_RNA.549-201ENST00000384657 102 ntBASIC2.3□□□□□ -2.04
ITGA1P56199 MIR597-201ENST00000384968 97 ntBASIC2.3□□□□□ -2.04
ITGA1P56199 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
ITGA1P56199 RNA5SP137-201ENST00000516833 135 ntBASIC2.3□□□□□ -2.04
ITGA1P56199 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.3□□□□□ -2.04
ITGA1P56199 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.3□□□□□ -2.04
ITGA1P56199 AC027279.3-201ENST00000625055 122 ntBASIC2.3□□□□□ -2.04
ITGA1P56199 MIR1291-201ENST00000627649 87 ntBASIC2.3□□□□□ -2.04
ITGA1P56199 Y_RNA.351-201ENST00000365436 96 ntBASIC2.29□□□□□ -2.04
ITGA1P56199 MIR144-201ENST00000384886 86 ntBASIC2.29□□□□□ -2.04
ITGA1P56199 RN7SKP223-201ENST00000410582 62 ntBASIC2.29□□□□□ -2.04
ITGA1P56199 AL356320.1-201ENST00000429616 163 ntBASIC2.29□□□□□ -2.04
ITGA1P56199 HSPE1P9-201ENST00000440046 311 ntBASIC2.29□□□□□ -2.04
ITGA1P56199 RNU7-80P-201ENST00000459562 61 ntBASIC2.29□□□□□ -2.04
ITGA1P56199 RPS29P24-201ENST00000486345 171 ntBASIC2.29□□□□□ -2.04
ITGA1P56199 AC002984.1-201ENST00000591692 448 ntBASIC2.29□□□□□ -2.04
ITGA1P56199 AC103810.6-201ENST00000606708 136 ntBASIC2.29□□□□□ -2.04
ITGA1P56199 MIR6895-201ENST00000613497 78 ntBASIC2.29□□□□□ -2.04
ITGA1P56199 AC009831.4-201ENST00000620744 325 ntBASIC2.29□□□□□ -2.04
ITGA1P56199 AL035470.1-201ENST00000622571 220 ntBASIC2.29□□□□□ -2.04
ITGA1P56199 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
ITGA1P56199 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ITGA1P56199 AC016717.2-201ENST00000609089 5141 ntBASIC2.28□□□□□ -2.04
ITGA1P56199 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
ITGA1P56199 MIR21-201ENST00000362134 72 ntBASIC2.28□□□□□ -2.04
ITGA1P56199 Y_RNA.298-201ENST00000364960 107 ntBASIC2.28□□□□□ -2.04
ITGA1P56199 Y_RNA.454-201ENST00000384224 113 ntBASIC2.28□□□□□ -2.04
ITGA1P56199 RNU11-3P-201ENST00000391111 133 ntBASIC2.28□□□□□ -2.04
ITGA1P56199 U8.17-201ENST00000391292 132 ntBASIC2.28□□□□□ -2.04
ITGA1P56199 AL627390.1-201ENST00000396055 340 ntBASIC2.28□□□□□ -2.04
ITGA1P56199 RN7SKP200-201ENST00000410564 320 ntBASIC2.28□□□□□ -2.04
ITGA1P56199 snoU13.23-201ENST00000458863 104 ntBASIC2.28□□□□□ -2.04
ITGA1P56199 AC026436.1-201ENST00000510537 270 ntBASIC2.28□□□□□ -2.04
ITGA1P56199 Y_RNA.694-201ENST00000516677 117 ntBASIC2.28□□□□□ -2.04
ITGA1P56199 RNA5SP82-201ENST00000516707 92 ntBASIC2.28□□□□□ -2.04
ITGA1P56199 AC046143.2-201ENST00000609789 160 ntBASIC2.28□□□□□ -2.04
ITGA1P56199 AC091932.4-201ENST00000623386 200 ntBASIC2.28□□□□□ -2.04
ITGA1P56199 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.28□□□□□ -2.04
ITGA1P56199 AL442644.1-201ENST00000454390 3105 ntBASIC2.28□□□□□ -2.04
ITGA1P56199 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ITGA1P56199 RNY4P6-201ENST00000363667 96 ntBASIC2.27□□□□□ -2.05
ITGA1P56199 Y_RNA.163-201ENST00000363702 113 ntBASIC2.27□□□□□ -2.05
ITGA1P56199 RNU6-950P-201ENST00000384651 107 ntBASIC2.27□□□□□ -2.05
ITGA1P56199 MIR759-201ENST00000390224 91 ntBASIC2.27□□□□□ -2.05
ITGA1P56199 AL034345.1-201ENST00000407768 123 ntBASIC2.27□□□□□ -2.05
ITGA1P56199 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.27□□□□□ -2.05
ITGA1P56199 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.27□□□□□ -2.05
ITGA1P56199 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.27□□□□□ -2.05
ITGA1P56199 SUMO2P16-201ENST00000519475 264 ntBASIC2.27□□□□□ -2.05
ITGA1P56199 MIR4778-201ENST00000577635 80 ntBASIC2.27□□□□□ -2.05
ITGA1P56199 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.27□□□□□ -2.05
ITGA1P56199 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ITGA1P56199 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.26□□□□□ -2.05
ITGA1P56199 AL596211.1-201ENST00000569873 2277 ntBASIC2.26□□□□□ -2.05
ITGA1P56199 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
ITGA1P56199 Y_RNA.49-201ENST00000362714 112 ntBASIC2.26□□□□□ -2.05
ITGA1P56199 SNORA63.5-201ENST00000363548 123 ntBASIC2.26□□□□□ -2.05
ITGA1P56199 RNU6-414P-201ENST00000363705 104 ntBASIC2.26□□□□□ -2.05
ITGA1P56199 SNORA63D-201ENST00000364359 132 ntBASIC2.26□□□□□ -2.05
ITGA1P56199 MIR1283-2-201ENST00000408621 87 ntBASIC2.26□□□□□ -2.05
ITGA1P56199 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.26□□□□□ -2.05
ITGA1P56199 RNU7-164P-201ENST00000459221 62 ntBASIC2.26□□□□□ -2.05
ITGA1P56199 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.26□□□□□ -2.05
ITGA1P56199 RNU6-830P-201ENST00000516353 107 ntBASIC2.26□□□□□ -2.05
ITGA1P56199 Y_RNA.677-201ENST00000516401 85 ntBASIC2.26□□□□□ -2.05
ITGA1P56199 RNU6-537P-201ENST00000517277 103 ntBASIC2.26□□□□□ -2.05
ITGA1P56199 DEFB122-202ENST00000569013 197 ntBASIC2.26□□□□□ -2.05
ITGA1P56199 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.26□□□□□ -2.05
ITGA1P56199 SNORD14A-201ENST00000606526 91 ntBASIC2.26□□□□□ -2.05
ITGA1P56199 AC067747.1-201ENST00000608026 250 ntBASIC2.26□□□□□ -2.05
ITGA1P56199 AC106754.2-201ENST00000623006 233 ntBASIC2.26□□□□□ -2.05
ITGA1P56199 AL589743.1-201ENST00000551932 2712 ntBASIC2.26□□□□□ -2.05
ITGA1P56199 MIRLET7G-201ENST00000362280 84 ntBASIC2.25□□□□□ -2.05
ITGA1P56199 RNU6-766P-201ENST00000362478 107 ntBASIC2.25□□□□□ -2.05
ITGA1P56199 Y_RNA.241-201ENST00000364470 117 ntBASIC2.25□□□□□ -2.05
ITGA1P56199 RNU1-51P-201ENST00000365345 176 ntBASIC2.25□□□□□ -2.05
ITGA1P56199 Y_RNA.362-201ENST00000365518 110 ntBASIC2.25□□□□□ -2.05
ITGA1P56199 RNU6-424P-201ENST00000384367 105 ntBASIC2.25□□□□□ -2.05
ITGA1P56199 RNA5SP465-201ENST00000391195 109 ntBASIC2.25□□□□□ -2.05
ITGA1P56199 U8.16-201ENST00000391279 133 ntBASIC2.25□□□□□ -2.05
ITGA1P56199 MIR1302-5-201ENST00000408164 150 ntBASIC2.25□□□□□ -2.05
ITGA1P56199 SNX2P2-201ENST00000424553 323 ntBASIC2.25□□□□□ -2.05
ITGA1P56199 AC015922.2-201ENST00000435593 184 ntBASIC2.25□□□□□ -2.05
ITGA1P56199 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.25□□□□□ -2.05
ITGA1P56199 RPL39P34-201ENST00000477141 156 ntBASIC2.25□□□□□ -2.05
ITGA1P56199 RNU7-123P-201ENST00000515911 60 ntBASIC2.25□□□□□ -2.05
ITGA1P56199 RNA5SP281-201ENST00000516504 135 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms