Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 SNORD14E-201ENST00000364009 85 ntBASIC1.86□□□□□ -2.11
PDE1AP54750 SNORD113-1-201ENST00000365321 69 ntBASIC1.86□□□□□ -2.11
PDE1AP54750 RNU6-81P-201ENST00000365608 104 ntBASIC1.86□□□□□ -2.11
PDE1AP54750 RNU6-442P-201ENST00000383968 104 ntBASIC1.86□□□□□ -2.11
PDE1AP54750 SNORA20-201ENST00000384662 132 ntBASIC1.86□□□□□ -2.11
PDE1AP54750 Y_RNA.586-201ENST00000391146 98 ntBASIC1.86□□□□□ -2.11
PDE1AP54750 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.86□□□□□ -2.11
PDE1AP54750 SNRPGP13-201ENST00000442212 177 ntBASIC1.86□□□□□ -2.11
PDE1AP54750 TMSB4XP3-201ENST00000445144 114 ntBASIC1.86□□□□□ -2.11
PDE1AP54750 CYCTP-201ENST00000504253 315 ntBASIC1.86□□□□□ -2.11
PDE1AP54750 RNU6-693P-201ENST00000516134 107 ntBASIC1.86□□□□□ -2.11
PDE1AP54750 RNU6-1270P-201ENST00000517128 108 ntBASIC1.86□□□□□ -2.11
PDE1AP54750 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.86□□□□□ -2.11
PDE1AP54750 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
PDE1AP54750 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.85□□□□□ -2.11
PDE1AP54750 RNU6-833P-201ENST00000363486 107 ntBASIC1.85□□□□□ -2.11
PDE1AP54750 SNORA25.7-201ENST00000364375 127 ntBASIC1.85□□□□□ -2.11
PDE1AP54750 Y_RNA.343-201ENST00000365354 112 ntBASIC1.85□□□□□ -2.11
PDE1AP54750 RNU6-203P-201ENST00000384038 104 ntBASIC1.85□□□□□ -2.11
PDE1AP54750 MIR194-1-201ENST00000384892 85 ntBASIC1.85□□□□□ -2.11
PDE1AP54750 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
PDE1AP54750 RNU6-360P-201ENST00000390944 104 ntBASIC1.85□□□□□ -2.11
PDE1AP54750 SNORD37.2-201ENST00000391075 66 ntBASIC1.85□□□□□ -2.11
PDE1AP54750 RNU6-460P-201ENST00000391158 108 ntBASIC1.85□□□□□ -2.11
PDE1AP54750 HMGN2P23-201ENST00000456759 269 ntBASIC1.85□□□□□ -2.11
PDE1AP54750 RNU7-25P-201ENST00000516544 62 ntBASIC1.85□□□□□ -2.11
PDE1AP54750 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
PDE1AP54750 MIR4709-201ENST00000577272 72 ntBASIC1.85□□□□□ -2.11
PDE1AP54750 MIR376A2-201ENST00000636782 80 ntBASIC1.85□□□□□ -2.11
PDE1AP54750 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.85□□□□□ -2.11
PDE1AP54750 AC010332.2-201ENST00000613083 1904 ntBASIC1.85□□□□□ -2.11
PDE1AP54750 RNU6-199P-201ENST00000362954 107 ntBASIC1.84□□□□□ -2.11
PDE1AP54750 RNU6-163P-201ENST00000384396 106 ntBASIC1.84□□□□□ -2.11
PDE1AP54750 Y_RNA.547-201ENST00000384654 119 ntBASIC1.84□□□□□ -2.11
PDE1AP54750 SNORD77.3-201ENST00000391113 65 ntBASIC1.84□□□□□ -2.11
PDE1AP54750 SNORA11.2-201ENST00000408318 127 ntBASIC1.84□□□□□ -2.11
PDE1AP54750 RNU6-938P-201ENST00000411285 103 ntBASIC1.84□□□□□ -2.11
PDE1AP54750 RPL30P13-201ENST00000418873 348 ntBASIC1.84□□□□□ -2.11
PDE1AP54750 MTND4LP9-201ENST00000427694 174 ntBASIC1.84□□□□□ -2.11
PDE1AP54750 AL591806.2-201ENST00000433122 173 ntBASIC1.84□□□□□ -2.11
PDE1AP54750 AF228730.3-201ENST00000436691 102 ntBASIC1.84□□□□□ -2.11
PDE1AP54750 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.84□□□□□ -2.11
PDE1AP54750 AC093850.1-201ENST00000454121 251 ntBASIC1.84□□□□□ -2.11
PDE1AP54750 RNU2-60P-201ENST00000517290 128 ntBASIC1.84□□□□□ -2.11
PDE1AP54750 MIR3129-201ENST00000581095 76 ntBASIC1.84□□□□□ -2.11
PDE1AP54750 AC095038.3-201ENST00000634439 195 ntBASIC1.84□□□□□ -2.11
PDE1AP54750 U2.22-201ENST00000636441 106 ntBASIC1.84□□□□□ -2.11
PDE1AP54750 AC132825.6-201ENST00000638861 357 ntBASIC1.84□□□□□ -2.11
PDE1AP54750 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
PDE1AP54750 Y_RNA.242-201ENST00000364473 110 ntBASIC1.83□□□□□ -2.12
PDE1AP54750 RNU6-1292P-201ENST00000383856 107 ntBASIC1.83□□□□□ -2.12
PDE1AP54750 Y_RNA.420-201ENST00000384043 110 ntBASIC1.83□□□□□ -2.12
PDE1AP54750 Y_RNA.542-201ENST00000384641 111 ntBASIC1.83□□□□□ -2.12
PDE1AP54750 MIR624-201ENST00000385217 97 ntBASIC1.83□□□□□ -2.12
PDE1AP54750 MIR513C-201ENST00000401352 84 ntBASIC1.83□□□□□ -2.12
PDE1AP54750 MIR1304-201ENST00000408243 91 ntBASIC1.83□□□□□ -2.12
PDE1AP54750 MIR548O-201ENST00000408583 114 ntBASIC1.83□□□□□ -2.12
PDE1AP54750 AL161935.2-201ENST00000414627 60 ntBASIC1.83□□□□□ -2.12
PDE1AP54750 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.83□□□□□ -2.12
PDE1AP54750 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.83□□□□□ -2.12
PDE1AP54750 RNU7-34P-201ENST00000459394 64 ntBASIC1.83□□□□□ -2.12
PDE1AP54750 AC090142.3-201ENST00000519012 385 ntBASIC1.83□□□□□ -2.12
PDE1AP54750 AL645939.4-201ENST00000604495 135 ntBASIC1.83□□□□□ -2.12
PDE1AP54750 AP001485.1-201ENST00000604799 199 ntBASIC1.83□□□□□ -2.12
PDE1AP54750 AL513423.1-201ENST00000621695 132 ntBASIC1.83□□□□□ -2.12
PDE1AP54750 MIR424-201ENST00000362227 98 ntBASIC1.82□□□□□ -2.12
PDE1AP54750 RNU6-60P-201ENST00000364792 103 ntBASIC1.82□□□□□ -2.12
PDE1AP54750 MIR517C-201ENST00000385103 95 ntBASIC1.82□□□□□ -2.12
PDE1AP54750 MIR660-201ENST00000385235 97 ntBASIC1.82□□□□□ -2.12
PDE1AP54750 HMGN2P32-201ENST00000444648 269 ntBASIC1.82□□□□□ -2.12
PDE1AP54750 PGBD4P5-201ENST00000445958 426 ntBASIC1.82□□□□□ -2.12
PDE1AP54750 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.82□□□□□ -2.12
PDE1AP54750 RNU7-12P-201ENST00000516030 62 ntBASIC1.82□□□□□ -2.12
PDE1AP54750 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.82□□□□□ -2.12
PDE1AP54750 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.82□□□□□ -2.12
PDE1AP54750 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.82□□□□□ -2.12
PDE1AP54750 AP001340.1-201ENST00000624405 217 ntBASIC1.82□□□□□ -2.12
PDE1AP54750 RNU6-439P-201ENST00000384188 106 ntBASIC1.81□□□□□ -2.12
PDE1AP54750 MIR891A-201ENST00000401237 79 ntBASIC1.81□□□□□ -2.12
PDE1AP54750 AC015922.2-201ENST00000435593 184 ntBASIC1.81□□□□□ -2.12
PDE1AP54750 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.81□□□□□ -2.12
PDE1AP54750 RNU4-57P-201ENST00000515980 135 ntBASIC1.81□□□□□ -2.12
PDE1AP54750 RNU6-830P-201ENST00000516353 107 ntBASIC1.81□□□□□ -2.12
PDE1AP54750 RNU6-548P-201ENST00000517083 115 ntBASIC1.81□□□□□ -2.12
PDE1AP54750 AC131055.1-201ENST00000584626 316 ntBASIC1.81□□□□□ -2.12
PDE1AP54750 RNU1-17P-201ENST00000363022 152 ntBASIC1.8□□□□□ -2.12
PDE1AP54750 SNORA19-201ENST00000384737 128 ntBASIC1.8□□□□□ -2.12
PDE1AP54750 MIR526A1-201ENST00000384897 85 ntBASIC1.8□□□□□ -2.12
PDE1AP54750 RNA5SP127-201ENST00000411051 133 ntBASIC1.8□□□□□ -2.12
PDE1AP54750 RNA5SP57-201ENST00000459463 123 ntBASIC1.8□□□□□ -2.12
PDE1AP54750 Y_RNA.686-201ENST00000516548 134 ntBASIC1.8□□□□□ -2.12
PDE1AP54750 SNORA44.1-201ENST00000517031 108 ntBASIC1.8□□□□□ -2.12
PDE1AP54750 MIR4778-201ENST00000577635 80 ntBASIC1.8□□□□□ -2.12
PDE1AP54750 AC103810.8-201ENST00000607347 118 ntBASIC1.8□□□□□ -2.12
PDE1AP54750 Y_RNA.37-201ENST00000362606 108 ntBASIC1.79□□□□□ -2.12
PDE1AP54750 Y_RNA.52-201ENST00000362760 96 ntBASIC1.79□□□□□ -2.12
PDE1AP54750 U8.1-201ENST00000362843 134 ntBASIC1.79□□□□□ -2.12
PDE1AP54750 RNU6-508P-201ENST00000363231 103 ntBASIC1.79□□□□□ -2.12
PDE1AP54750 RNU1-42P-201ENST00000364033 160 ntBASIC1.79□□□□□ -2.12
PDE1AP54750 MIR802-201ENST00000390235 94 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms