Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.8□□□□□ -1.96
USP11P51784 AL513328.1-201ENST00000446460 224 ntBASIC2.8□□□□□ -1.96
USP11P51784 RPL39P25-201ENST00000449384 154 ntBASIC2.8□□□□□ -1.96
USP11P51784 RNU7-80P-201ENST00000459562 61 ntBASIC2.8□□□□□ -1.96
USP11P51784 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.8□□□□□ -1.96
USP11P51784 MIR3169-201ENST00000578032 83 ntBASIC2.8□□□□□ -1.96
USP11P51784 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
USP11P51784 AC016717.2-201ENST00000609089 5141 ntBASIC2.8□□□□□ -1.96
USP11P51784 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.79□□□□□ -1.96
USP11P51784 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.79□□□□□ -1.96
USP11P51784 RNY1P10-201ENST00000363268 113 ntBASIC2.79□□□□□ -1.96
USP11P51784 DEFA7P-201ENST00000382676 285 ntBASIC2.79□□□□□ -1.96
USP11P51784 MIR450A2-201ENST00000385022 100 ntBASIC2.79□□□□□ -1.96
USP11P51784 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
USP11P51784 RPS12P2-201ENST00000439728 269 ntBASIC2.79□□□□□ -1.96
USP11P51784 PGBD4P5-201ENST00000445958 426 ntBASIC2.79□□□□□ -1.96
USP11P51784 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.79□□□□□ -1.96
USP11P51784 RNU7-26P-201ENST00000458980 63 ntBASIC2.79□□□□□ -1.96
USP11P51784 AC114811.1-201ENST00000507207 168 ntBASIC2.79□□□□□ -1.96
USP11P51784 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.79□□□□□ -1.96
USP11P51784 AC026421.1-201ENST00000519101 163 ntBASIC2.79□□□□□ -1.96
USP11P51784 AC078899.2-201ENST00000595282 212 ntBASIC2.79□□□□□ -1.96
USP11P51784 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
USP11P51784 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
USP11P51784 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
USP11P51784 MIRLET7C-201ENST00000362160 84 ntBASIC2.78□□□□□ -1.96
USP11P51784 MIR342-201ENST00000362212 99 ntBASIC2.78□□□□□ -1.96
USP11P51784 Y_RNA.107-201ENST00000363190 121 ntBASIC2.78□□□□□ -1.96
USP11P51784 RNU6-1099P-201ENST00000363533 107 ntBASIC2.78□□□□□ -1.96
USP11P51784 RNU6-820P-201ENST00000384273 107 ntBASIC2.78□□□□□ -1.96
USP11P51784 RNU6-1152P-201ENST00000384576 107 ntBASIC2.78□□□□□ -1.96
USP11P51784 AL512326.2-201ENST00000426359 151 ntBASIC2.78□□□□□ -1.96
USP11P51784 AC245047.3-201ENST00000429428 127 ntBASIC2.78□□□□□ -1.96
USP11P51784 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.78□□□□□ -1.96
USP11P51784 AC113410.1-201ENST00000505029 247 ntBASIC2.78□□□□□ -1.96
USP11P51784 DEFB131E-201ENST00000532329 154 ntBASIC2.78□□□□□ -1.96
USP11P51784 AC104984.5-201ENST00000586878 94 ntBASIC2.78□□□□□ -1.96
USP11P51784 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.78□□□□□ -1.96
USP11P51784 AL449363.1-201ENST00000617815 186 ntBASIC2.78□□□□□ -1.96
USP11P51784 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
USP11P51784 AL442644.1-201ENST00000454390 3105 ntBASIC2.77□□□□□ -1.97
USP11P51784 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
USP11P51784 MIR6073-201ENST00000352083 89 ntBASIC2.77□□□□□ -1.97
USP11P51784 RNY3P2-201ENST00000362918 102 ntBASIC2.77□□□□□ -1.97
USP11P51784 SNORA67.1-201ENST00000364749 141 ntBASIC2.77□□□□□ -1.97
USP11P51784 AL627390.1-201ENST00000396055 340 ntBASIC2.77□□□□□ -1.97
USP11P51784 MIR1912-201ENST00000410389 80 ntBASIC2.77□□□□□ -1.97
USP11P51784 SNX2P2-201ENST00000424553 323 ntBASIC2.77□□□□□ -1.97
USP11P51784 RNU6-893P-201ENST00000458841 100 ntBASIC2.77□□□□□ -1.97
USP11P51784 SCARNA23-201ENST00000516060 130 ntBASIC2.77□□□□□ -1.97
USP11P51784 RNA5SP82-201ENST00000516707 92 ntBASIC2.77□□□□□ -1.97
USP11P51784 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.77□□□□□ -1.97
USP11P51784 Y_RNA.773-201ENST00000607168 90 ntBASIC2.77□□□□□ -1.97
USP11P51784 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.77□□□□□ -1.97
USP11P51784 AC095038.3-201ENST00000634439 195 ntBASIC2.77□□□□□ -1.97
USP11P51784 MIR1255B1-201ENST00000636325 63 ntBASIC2.77□□□□□ -1.97
USP11P51784 AC007336.1-201ENST00000576365 3828 ntBASIC2.77□□□□□ -1.97
USP11P51784 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.77□□□□□ -1.97
USP11P51784 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
USP11P51784 Y_RNA.454-201ENST00000384224 113 ntBASIC2.76□□□□□ -1.97
USP11P51784 RN7SKP200-201ENST00000410564 320 ntBASIC2.76□□□□□ -1.97
USP11P51784 RNA5SP144-201ENST00000410846 116 ntBASIC2.76□□□□□ -1.97
USP11P51784 RNU6-638P-201ENST00000516582 104 ntBASIC2.76□□□□□ -1.97
USP11P51784 RNU7-28P-201ENST00000516759 62 ntBASIC2.76□□□□□ -1.97
USP11P51784 MIR3618-201ENST00000580330 88 ntBASIC2.76□□□□□ -1.97
USP11P51784 MIR6715A-201ENST00000615929 79 ntBASIC2.76□□□□□ -1.97
USP11P51784 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.76□□□□□ -1.97
USP11P51784 MIR494-201ENST00000349529 81 ntBASIC2.75□□□□□ -1.97
USP11P51784 SNORA27-201ENST00000384323 126 ntBASIC2.75□□□□□ -1.97
USP11P51784 SNORA31.10-201ENST00000516482 106 ntBASIC2.75□□□□□ -1.97
USP11P51784 AC004812.1-201ENST00000540773 146 ntBASIC2.75□□□□□ -1.97
USP11P51784 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.75□□□□□ -1.97
USP11P51784 AL590808.1-201ENST00000618696 141 ntBASIC2.75□□□□□ -1.97
USP11P51784 MIR8054-201ENST00000620877 86 ntBASIC2.75□□□□□ -1.97
USP11P51784 MIR1291-201ENST00000627649 87 ntBASIC2.75□□□□□ -1.97
USP11P51784 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
USP11P51784 SNORA38-201ENST00000363946 132 ntBASIC2.74□□□□□ -1.97
USP11P51784 RNU4-36P-201ENST00000364294 144 ntBASIC2.74□□□□□ -1.97
USP11P51784 Y_RNA.290-201ENST00000364879 114 ntBASIC2.74□□□□□ -1.97
USP11P51784 Y_RNA.531-201ENST00000384589 121 ntBASIC2.74□□□□□ -1.97
USP11P51784 Y_RNA.593-201ENST00000410292 98 ntBASIC2.74□□□□□ -1.97
USP11P51784 STAG3L5P-204ENST00000443759 179 ntBASIC2.74□□□□□ -1.97
USP11P51784 RPS23P4-201ENST00000487908 423 ntBASIC2.74□□□□□ -1.97
USP11P51784 RNU6-998P-201ENST00000515894 101 ntBASIC2.74□□□□□ -1.97
USP11P51784 MIR4778-201ENST00000577635 80 ntBASIC2.74□□□□□ -1.97
USP11P51784 AL513534.2-201ENST00000603836 250 ntBASIC2.74□□□□□ -1.97
USP11P51784 MIR203B-201ENST00000636080 86 ntBASIC2.74□□□□□ -1.97
USP11P51784 AC245060.5-201ENST00000610778 3293 ntBASIC2.74□□□□□ -1.97
USP11P51784 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
USP11P51784 POLR2J4-204ENST00000418424 324 ntBASIC2.73□□□□□ -1.97
USP11P51784 AL353813.1-201ENST00000440700 253 ntBASIC2.73□□□□□ -1.97
USP11P51784 AC026436.1-201ENST00000510537 270 ntBASIC2.73□□□□□ -1.97
USP11P51784 AC103810.6-201ENST00000606708 136 ntBASIC2.73□□□□□ -1.97
USP11P51784 AC067747.1-201ENST00000608026 250 ntBASIC2.73□□□□□ -1.97
USP11P51784 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.73□□□□□ -1.97
USP11P51784 AC092881.1-201ENST00000638218 2733 ntBASIC2.72□□□□□ -1.97
USP11P51784 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
USP11P51784 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
USP11P51784 RNU6-661P-201ENST00000362409 107 ntBASIC2.72□□□□□ -1.97
USP11P51784 Y_RNA.241-201ENST00000364470 117 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms