Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CHRNA4P43681 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CHRNA4P43681 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.95□□□□□ -1.94
CHRNA4P43681 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CHRNA4P43681 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CHRNA4P43681 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CHRNA4P43681 SNORA25.6-201ENST00000364121 118 ntBASIC2.94□□□□□ -1.94
CHRNA4P43681 SNORA8-201ENST00000384574 139 ntBASIC2.94□□□□□ -1.94
CHRNA4P43681 RNU6-987P-201ENST00000384759 104 ntBASIC2.94□□□□□ -1.94
CHRNA4P43681 RNA5SP323-201ENST00000391094 133 ntBASIC2.94□□□□□ -1.94
CHRNA4P43681 RNU2-63P-201ENST00000410792 194 ntBASIC2.94□□□□□ -1.94
CHRNA4P43681 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.94□□□□□ -1.94
CHRNA4P43681 AL031183.1-201ENST00000457667 207 ntBASIC2.94□□□□□ -1.94
CHRNA4P43681 RNU6-991P-201ENST00000516168 107 ntBASIC2.94□□□□□ -1.94
CHRNA4P43681 AL513043.2-201ENST00000573941 143 ntBASIC2.94□□□□□ -1.94
CHRNA4P43681 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.94□□□□□ -1.94
CHRNA4P43681 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.94□□□□□ -1.94
CHRNA4P43681 AL162274.2-201ENST00000614406 332 ntBASIC2.94□□□□□ -1.94
CHRNA4P43681 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.94□□□□□ -1.94
CHRNA4P43681 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CHRNA4P43681 SNORA32-201ENST00000384072 121 ntBASIC2.93□□□□□ -1.94
CHRNA4P43681 MIR515-2-201ENST00000384883 83 ntBASIC2.93□□□□□ -1.94
CHRNA4P43681 MIR515-1-201ENST00000384884 83 ntBASIC2.93□□□□□ -1.94
CHRNA4P43681 MIR767-201ENST00000390228 109 ntBASIC2.93□□□□□ -1.94
CHRNA4P43681 RPS29P28-201ENST00000446439 141 ntBASIC2.93□□□□□ -1.94
CHRNA4P43681 RNU7-34P-201ENST00000459394 64 ntBASIC2.93□□□□□ -1.94
CHRNA4P43681 RNU6-917P-201ENST00000516294 104 ntBASIC2.93□□□□□ -1.94
CHRNA4P43681 SNORA25.13-201ENST00000516395 103 ntBASIC2.93□□□□□ -1.94
CHRNA4P43681 AC024995.1-201ENST00000523014 93 ntBASIC2.93□□□□□ -1.94
CHRNA4P43681 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.93□□□□□ -1.94
CHRNA4P43681 AC007536.1-201ENST00000533382 349 ntBASIC2.93□□□□□ -1.94
CHRNA4P43681 MIR3134-201ENST00000579433 74 ntBASIC2.93□□□□□ -1.94
CHRNA4P43681 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CHRNA4P43681 RNU4-32P-201ENST00000363404 141 ntBASIC2.92□□□□□ -1.94
CHRNA4P43681 RNU6-624P-201ENST00000363411 107 ntBASIC2.92□□□□□ -1.94
CHRNA4P43681 RNU1-105P-201ENST00000363470 161 ntBASIC2.92□□□□□ -1.94
CHRNA4P43681 RNU6-411P-201ENST00000384451 107 ntBASIC2.92□□□□□ -1.94
CHRNA4P43681 RNU6-1307P-201ENST00000391012 103 ntBASIC2.92□□□□□ -1.94
CHRNA4P43681 SNORA26.6-201ENST00000391256 115 ntBASIC2.92□□□□□ -1.94
CHRNA4P43681 MIR548G-201ENST00000408442 89 ntBASIC2.92□□□□□ -1.94
CHRNA4P43681 AC022018.1-201ENST00000430685 241 ntBASIC2.92□□□□□ -1.94
CHRNA4P43681 UBL5P3-201ENST00000475112 231 ntBASIC2.92□□□□□ -1.94
CHRNA4P43681 RN7SL429P-201ENST00000479090 223 ntBASIC2.92□□□□□ -1.94
CHRNA4P43681 RN7SL489P-201ENST00000486185 223 ntBASIC2.92□□□□□ -1.94
CHRNA4P43681 RN7SL327P-201ENST00000488659 223 ntBASIC2.92□□□□□ -1.94
CHRNA4P43681 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.92□□□□□ -1.94
CHRNA4P43681 RN7SL853P-201ENST00000617250 223 ntBASIC2.92□□□□□ -1.94
CHRNA4P43681 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CHRNA4P43681 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
CHRNA4P43681 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CHRNA4P43681 SNORA9.2-201ENST00000365361 133 ntBASIC2.91□□□□□ -1.94
CHRNA4P43681 MIR34C-201ENST00000384831 77 ntBASIC2.91□□□□□ -1.94
CHRNA4P43681 MIR206-201ENST00000384872 86 ntBASIC2.91□□□□□ -1.94
CHRNA4P43681 MIR1267-201ENST00000408723 78 ntBASIC2.91□□□□□ -1.94
CHRNA4P43681 AC104332.2-201ENST00000429959 156 ntBASIC2.91□□□□□ -1.94
CHRNA4P43681 AL450471.1-201ENST00000447509 127 ntBASIC2.91□□□□□ -1.94
CHRNA4P43681 SCARNA18B-201ENST00000458806 135 ntBASIC2.91□□□□□ -1.94
CHRNA4P43681 RNU1-98P-201ENST00000458992 160 ntBASIC2.91□□□□□ -1.94
CHRNA4P43681 RPS29P12-201ENST00000460178 152 ntBASIC2.91□□□□□ -1.94
CHRNA4P43681 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.91□□□□□ -1.94
CHRNA4P43681 RNU6-56P-201ENST00000516986 93 ntBASIC2.91□□□□□ -1.94
CHRNA4P43681 EIF4BP1-201ENST00000554881 351 ntBASIC2.91□□□□□ -1.94
CHRNA4P43681 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.91□□□□□ -1.94
CHRNA4P43681 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CHRNA4P43681 AC092435.3-201ENST00000565538 3654 ntBASIC2.9□□□□□ -1.94
CHRNA4P43681 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CHRNA4P43681 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CHRNA4P43681 RNU6-424P-201ENST00000384367 105 ntBASIC2.9□□□□□ -1.95
CHRNA4P43681 RNU4-37P-201ENST00000410214 84 ntBASIC2.9□□□□□ -1.95
CHRNA4P43681 RNA5SP261-201ENST00000410536 106 ntBASIC2.9□□□□□ -1.95
CHRNA4P43681 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.9□□□□□ -1.95
CHRNA4P43681 RPS29P6-201ENST00000438196 145 ntBASIC2.9□□□□□ -1.95
CHRNA4P43681 S100A11P2-201ENST00000467589 312 ntBASIC2.9□□□□□ -1.95
CHRNA4P43681 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.9□□□□□ -1.95
CHRNA4P43681 AL163195.1-201ENST00000496941 348 ntBASIC2.9□□□□□ -1.95
CHRNA4P43681 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.9□□□□□ -1.95
CHRNA4P43681 RNU7-153P-201ENST00000516455 62 ntBASIC2.9□□□□□ -1.95
CHRNA4P43681 RNU7-28P-201ENST00000516759 62 ntBASIC2.9□□□□□ -1.95
CHRNA4P43681 RNU6-557P-201ENST00000516842 110 ntBASIC2.9□□□□□ -1.95
CHRNA4P43681 AC020891.4-201ENST00000605745 93 ntBASIC2.9□□□□□ -1.95
CHRNA4P43681 ICE2P2-201ENST00000483823 2787 ntBASIC2.9□□□□□ -1.95
CHRNA4P43681 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.9□□□□□ -1.95
CHRNA4P43681 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CHRNA4P43681 Y_RNA.173-201ENST00000363776 113 ntBASIC2.89□□□□□ -1.95
CHRNA4P43681 Y_RNA.386-201ENST00000383913 105 ntBASIC2.89□□□□□ -1.95
CHRNA4P43681 SNORA44-201ENST00000384584 132 ntBASIC2.89□□□□□ -1.95
CHRNA4P43681 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.89□□□□□ -1.95
CHRNA4P43681 MIR1236-201ENST00000408340 102 ntBASIC2.89□□□□□ -1.95
CHRNA4P43681 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.89□□□□□ -1.95
CHRNA4P43681 AL139132.1-201ENST00000431587 344 ntBASIC2.89□□□□□ -1.95
CHRNA4P43681 AL161788.1-201ENST00000441805 169 ntBASIC2.89□□□□□ -1.95
CHRNA4P43681 SCARNA17.1-201ENST00000516211 143 ntBASIC2.89□□□□□ -1.95
CHRNA4P43681 SCARNA17.2-201ENST00000516334 143 ntBASIC2.89□□□□□ -1.95
CHRNA4P43681 RNU6-1015P-201ENST00000517121 99 ntBASIC2.89□□□□□ -1.95
CHRNA4P43681 RNU7-181P-201ENST00000517234 74 ntBASIC2.89□□□□□ -1.95
CHRNA4P43681 RNU6-90P-201ENST00000606352 106 ntBASIC2.89□□□□□ -1.95
CHRNA4P43681 SCARNA17.4-201ENST00000614296 143 ntBASIC2.89□□□□□ -1.95
CHRNA4P43681 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CHRNA4P43681 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.89□□□□□ -1.95
CHRNA4P43681 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms