Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 AC090821.2-201ENST00000523552 176 ntBASIC1.34□□□□□ -2.19
CHKAP35790 AP003716.2-201ENST00000528260 108 ntBASIC1.34□□□□□ -2.19
CHKAP35790 MIR548AR-201ENST00000582191 57 ntBASIC1.34□□□□□ -2.19
CHKAP35790 MIR6078-201ENST00000611069 100 ntBASIC1.34□□□□□ -2.19
CHKAP35790 Y_RNA.363-201ENST00000365529 113 ntBASIC1.33□□□□□ -2.2
CHKAP35790 Y_RNA.587-201ENST00000391210 103 ntBASIC1.33□□□□□ -2.2
CHKAP35790 SNORA26-201ENST00000391286 122 ntBASIC1.33□□□□□ -2.2
CHKAP35790 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.33□□□□□ -2.2
CHKAP35790 RNU4-57P-201ENST00000515980 135 ntBASIC1.33□□□□□ -2.2
CHKAP35790 SNORD24-201ENST00000383884 75 ntBASIC1.32□□□□□ -2.2
CHKAP35790 Y_RNA.537-201ENST00000384626 109 ntBASIC1.32□□□□□ -2.2
CHKAP35790 SNORD28B-201ENST00000390993 75 ntBASIC1.32□□□□□ -2.2
CHKAP35790 MIR548O-201ENST00000408583 114 ntBASIC1.32□□□□□ -2.2
CHKAP35790 RNU6-651P-201ENST00000411040 105 ntBASIC1.32□□□□□ -2.2
CHKAP35790 AC063976.4-201ENST00000421971 163 ntBASIC1.32□□□□□ -2.2
CHKAP35790 AC004223.1-201ENST00000479840 271 ntBASIC1.32□□□□□ -2.2
CHKAP35790 SCARNA8-201ENST00000515924 131 ntBASIC1.32□□□□□ -2.2
CHKAP35790 Y_RNA.668-201ENST00000516233 93 ntBASIC1.32□□□□□ -2.2
CHKAP35790 MIR103A2-201ENST00000362154 78 ntBASIC1.31□□□□□ -2.2
CHKAP35790 Y_RNA.547-201ENST00000384654 119 ntBASIC1.31□□□□□ -2.2
CHKAP35790 RNU2-38P-201ENST00000410856 79 ntBASIC1.31□□□□□ -2.2
CHKAP35790 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.31□□□□□ -2.2
CHKAP35790 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.31□□□□□ -2.2
CHKAP35790 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.31□□□□□ -2.2
CHKAP35790 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.31□□□□□ -2.2
CHKAP35790 RNU6-1132P-201ENST00000459214 107 ntBASIC1.31□□□□□ -2.2
CHKAP35790 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.31□□□□□ -2.2
CHKAP35790 RNU7-25P-201ENST00000516544 62 ntBASIC1.31□□□□□ -2.2
CHKAP35790 RNU11-2P-201ENST00000516898 142 ntBASIC1.31□□□□□ -2.2
CHKAP35790 AL365265.1-201ENST00000621045 234 ntBASIC1.31□□□□□ -2.2
CHKAP35790 MIR4251-201ENST00000635819 61 ntBASIC1.31□□□□□ -2.2
CHKAP35790 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.31□□□□□ -2.2
CHKAP35790 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
CHKAP35790 Y_RNA.416-201ENST00000384014 113 ntBASIC1.3□□□□□ -2.2
CHKAP35790 Y_RNA.486-201ENST00000384398 107 ntBASIC1.3□□□□□ -2.2
CHKAP35790 MIR616-201ENST00000385293 97 ntBASIC1.3□□□□□ -2.2
CHKAP35790 RNU7-21P-201ENST00000459430 62 ntBASIC1.3□□□□□ -2.2
CHKAP35790 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.3□□□□□ -2.2
CHKAP35790 RNU6-365P-201ENST00000517113 106 ntBASIC1.3□□□□□ -2.2
CHKAP35790 AL442067.1-201ENST00000613261 223 ntBASIC1.3□□□□□ -2.2
CHKAP35790 AC099654.10-201ENST00000640395 161 ntBASIC1.3□□□□□ -2.2
CHKAP35790 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CHKAP35790 Y_RNA.54-201ENST00000362766 105 ntBASIC1.29□□□□□ -2.2
CHKAP35790 Y_RNA.238-201ENST00000364441 102 ntBASIC1.29□□□□□ -2.2
CHKAP35790 Y_RNA.262-201ENST00000364641 102 ntBASIC1.29□□□□□ -2.2
CHKAP35790 Y_RNA.572-201ENST00000384757 98 ntBASIC1.29□□□□□ -2.2
CHKAP35790 MIR568-201ENST00000385036 95 ntBASIC1.29□□□□□ -2.2
CHKAP35790 RNU6-847P-201ENST00000411115 108 ntBASIC1.29□□□□□ -2.2
CHKAP35790 MTND3P2-201ENST00000438452 342 ntBASIC1.29□□□□□ -2.2
CHKAP35790 AC087499.4-201ENST00000448505 178 ntBASIC1.29□□□□□ -2.2
CHKAP35790 RNU7-90P-201ENST00000459216 62 ntBASIC1.29□□□□□ -2.2
CHKAP35790 AC107297.1-201ENST00000459991 176 ntBASIC1.29□□□□□ -2.2
CHKAP35790 RPS26P48-201ENST00000491713 339 ntBASIC1.29□□□□□ -2.2
CHKAP35790 Y_RNA.666-201ENST00000516187 112 ntBASIC1.29□□□□□ -2.2
CHKAP35790 RNU6-1299P-201ENST00000516316 100 ntBASIC1.29□□□□□ -2.2
CHKAP35790 RNU7-181P-201ENST00000517234 74 ntBASIC1.29□□□□□ -2.2
CHKAP35790 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.29□□□□□ -2.2
CHKAP35790 Y_RNA.277-201ENST00000364754 102 ntBASIC1.28□□□□□ -2.2
CHKAP35790 Y_RNA.478-201ENST00000384358 107 ntBASIC1.28□□□□□ -2.2
CHKAP35790 SNORA51.10-201ENST00000384418 136 ntBASIC1.28□□□□□ -2.2
CHKAP35790 RNU6-1228P-201ENST00000391014 107 ntBASIC1.28□□□□□ -2.2
CHKAP35790 SNORA75.2-201ENST00000391138 150 ntBASIC1.28□□□□□ -2.2
CHKAP35790 SNORA75.3-201ENST00000391231 150 ntBASIC1.28□□□□□ -2.2
CHKAP35790 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.28□□□□□ -2.2
CHKAP35790 AC002429.1-201ENST00000437672 148 ntBASIC1.28□□□□□ -2.2
CHKAP35790 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.28□□□□□ -2.2
CHKAP35790 RNA5SP153-201ENST00000516498 76 ntBASIC1.28□□□□□ -2.2
CHKAP35790 AL353621.2-201ENST00000605340 133 ntBASIC1.28□□□□□ -2.2
CHKAP35790 U4.1-201ENST00000620349 87 ntBASIC1.28□□□□□ -2.2
CHKAP35790 AC091895.1-201ENST00000624494 256 ntBASIC1.28□□□□□ -2.2
CHKAP35790 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.27□□□□□ -2.21
CHKAP35790 RNU6-653P-201ENST00000363074 106 ntBASIC1.27□□□□□ -2.21
CHKAP35790 RNU4-17P-201ENST00000365598 141 ntBASIC1.27□□□□□ -2.21
CHKAP35790 RNU2-13P-201ENST00000515909 113 ntBASIC1.27□□□□□ -2.21
CHKAP35790 RNU6-504P-201ENST00000516568 104 ntBASIC1.27□□□□□ -2.21
CHKAP35790 AC109810.1-201ENST00000534066 224 ntBASIC1.27□□□□□ -2.21
CHKAP35790 MIR4643-201ENST00000577473 78 ntBASIC1.27□□□□□ -2.21
CHKAP35790 MIR8070-201ENST00000616510 88 ntBASIC1.27□□□□□ -2.21
CHKAP35790 SEPT14P17-201ENST00000617978 177 ntBASIC1.27□□□□□ -2.21
CHKAP35790 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CHKAP35790 SNORD115-28-201ENST00000363931 81 ntBASIC1.26□□□□□ -2.21
CHKAP35790 Y_RNA.432-201ENST00000384087 111 ntBASIC1.26□□□□□ -2.21
CHKAP35790 MIR200A-201ENST00000384875 90 ntBASIC1.26□□□□□ -2.21
CHKAP35790 RNU6-381P-201ENST00000391259 108 ntBASIC1.26□□□□□ -2.21
CHKAP35790 MIR1185-1-201ENST00000408598 86 ntBASIC1.26□□□□□ -2.21
CHKAP35790 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.26□□□□□ -2.21
CHKAP35790 AL118496.2-201ENST00000448300 230 ntBASIC1.26□□□□□ -2.21
CHKAP35790 MIR4791-201ENST00000607666 84 ntBASIC1.26□□□□□ -2.21
CHKAP35790 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.25□□□□□ -2.21
CHKAP35790 AC008163.1-202ENST00000636004 2889 ntBASIC1.25□□□□□ -2.21
CHKAP35790 SNORD115-34-201ENST00000362441 82 ntBASIC1.25□□□□□ -2.21
CHKAP35790 SNORD115-12-201ENST00000362583 82 ntBASIC1.25□□□□□ -2.21
CHKAP35790 SNORD115-29-201ENST00000362834 82 ntBASIC1.25□□□□□ -2.21
CHKAP35790 SNORD115-9-201ENST00000362912 82 ntBASIC1.25□□□□□ -2.21
CHKAP35790 SNORD115-21-201ENST00000362963 81 ntBASIC1.25□□□□□ -2.21
CHKAP35790 RNU6-888P-201ENST00000363010 101 ntBASIC1.25□□□□□ -2.21
CHKAP35790 SNORD115-14-201ENST00000363090 81 ntBASIC1.25□□□□□ -2.21
CHKAP35790 SNORA25.3-201ENST00000363205 127 ntBASIC1.25□□□□□ -2.21
CHKAP35790 SNORD115-13-201ENST00000363358 82 ntBASIC1.25□□□□□ -2.21
CHKAP35790 SNORD115-41-201ENST00000363608 82 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms