Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 RNA5SP295-201ENST00000362655 121 ntBASIC2.87□□□□□ -1.95
COL8A1P27658 Y_RNA.370-201ENST00000365589 108 ntBASIC2.87□□□□□ -1.95
COL8A1P27658 SNORA24-201ENST00000384096 131 ntBASIC2.87□□□□□ -1.95
COL8A1P27658 Y_RNA.448-201ENST00000384185 108 ntBASIC2.87□□□□□ -1.95
COL8A1P27658 AC108938.1-201ENST00000451204 136 ntBASIC2.87□□□□□ -1.95
COL8A1P27658 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.87□□□□□ -1.95
COL8A1P27658 RPS29P29-201ENST00000456396 171 ntBASIC2.87□□□□□ -1.95
COL8A1P27658 CYP2C59P-201ENST00000457790 269 ntBASIC2.87□□□□□ -1.95
COL8A1P27658 RNU6-634P-201ENST00000459134 106 ntBASIC2.87□□□□□ -1.95
COL8A1P27658 AC234781.5-201ENST00000508429 271 ntBASIC2.87□□□□□ -1.95
COL8A1P27658 SNORA48.11-201ENST00000517015 89 ntBASIC2.87□□□□□ -1.95
COL8A1P27658 RNU6-448P-201ENST00000517052 107 ntBASIC2.87□□□□□ -1.95
COL8A1P27658 UBL5P2-201ENST00000583788 219 ntBASIC2.87□□□□□ -1.95
COL8A1P27658 FAM106DP-201ENST00000586416 501 ntBASIC2.87□□□□□ -1.95
COL8A1P27658 AL020996.3-201ENST00000606617 222 ntBASIC2.87□□□□□ -1.95
COL8A1P27658 MIR4791-201ENST00000607666 84 ntBASIC2.87□□□□□ -1.95
COL8A1P27658 MIR7157-201ENST00000635801 60 ntBASIC2.87□□□□□ -1.95
COL8A1P27658 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
COL8A1P27658 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.87□□□□□ -1.95
COL8A1P27658 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.86□□□□□ -1.95
COL8A1P27658 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
COL8A1P27658 SNORA63.2-201ENST00000362603 126 ntBASIC2.86□□□□□ -1.95
COL8A1P27658 RNU6-649P-201ENST00000384463 107 ntBASIC2.86□□□□□ -1.95
COL8A1P27658 FO393413.1-201ENST00000402892 195 ntBASIC2.86□□□□□ -1.95
COL8A1P27658 RNU6-1190P-201ENST00000410811 104 ntBASIC2.86□□□□□ -1.95
COL8A1P27658 EEF1A1P41-201ENST00000414667 207 ntBASIC2.86□□□□□ -1.95
COL8A1P27658 AC006989.1-201ENST00000427212 131 ntBASIC2.86□□□□□ -1.95
COL8A1P27658 AC022018.1-201ENST00000430685 241 ntBASIC2.86□□□□□ -1.95
COL8A1P27658 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.86□□□□□ -1.95
COL8A1P27658 AL031183.1-201ENST00000457667 207 ntBASIC2.86□□□□□ -1.95
COL8A1P27658 RNU7-73P-201ENST00000458743 63 ntBASIC2.86□□□□□ -1.95
COL8A1P27658 RN7SKP132-201ENST00000516001 208 ntBASIC2.86□□□□□ -1.95
COL8A1P27658 Y_RNA.660-201ENST00000516002 120 ntBASIC2.86□□□□□ -1.95
COL8A1P27658 MIR4319-201ENST00000577285 85 ntBASIC2.86□□□□□ -1.95
COL8A1P27658 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.86□□□□□ -1.95
COL8A1P27658 MIR4738-201ENST00000579134 87 ntBASIC2.86□□□□□ -1.95
COL8A1P27658 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.86□□□□□ -1.95
COL8A1P27658 MIR7153-201ENST00000637758 57 ntBASIC2.86□□□□□ -1.95
COL8A1P27658 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL8A1P27658 RNA5SP133-201ENST00000363368 119 ntBASIC2.85□□□□□ -1.95
COL8A1P27658 RNA5SP138-201ENST00000365098 114 ntBASIC2.85□□□□□ -1.95
COL8A1P27658 SNORA2B-201ENST00000384583 137 ntBASIC2.85□□□□□ -1.95
COL8A1P27658 RNU6-447P-201ENST00000410293 104 ntBASIC2.85□□□□□ -1.95
COL8A1P27658 RNU6-1118P-201ENST00000410382 104 ntBASIC2.85□□□□□ -1.95
COL8A1P27658 RNU6-1076P-201ENST00000410397 104 ntBASIC2.85□□□□□ -1.95
COL8A1P27658 RNU6-355P-201ENST00000410427 104 ntBASIC2.85□□□□□ -1.95
COL8A1P27658 RNU6-791P-201ENST00000410467 104 ntBASIC2.85□□□□□ -1.95
COL8A1P27658 RNU6-705P-201ENST00000410601 104 ntBASIC2.85□□□□□ -1.95
COL8A1P27658 RNU6-1100P-201ENST00000410691 104 ntBASIC2.85□□□□□ -1.95
COL8A1P27658 RNU6-860P-201ENST00000410860 104 ntBASIC2.85□□□□□ -1.95
COL8A1P27658 RNU6-1217P-201ENST00000411276 104 ntBASIC2.85□□□□□ -1.95
COL8A1P27658 RNU6-785P-201ENST00000411324 104 ntBASIC2.85□□□□□ -1.95
COL8A1P27658 SNORD4B-201ENST00000459083 72 ntBASIC2.85□□□□□ -1.95
COL8A1P27658 CKS1BP2-201ENST00000497342 240 ntBASIC2.85□□□□□ -1.95
COL8A1P27658 AL356280.1-201ENST00000603614 379 ntBASIC2.85□□□□□ -1.95
COL8A1P27658 SNORA28-201ENST00000606769 126 ntBASIC2.85□□□□□ -1.95
COL8A1P27658 U6.90-201ENST00000614007 104 ntBASIC2.85□□□□□ -1.95
COL8A1P27658 U6.70-201ENST00000620287 104 ntBASIC2.85□□□□□ -1.95
COL8A1P27658 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
COL8A1P27658 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
COL8A1P27658 GABRG2-229ENST00000641017 3628 ntBASIC2.85□□□□□ -1.95
COL8A1P27658 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
COL8A1P27658 AL356274.2-201ENST00000624379 3752 ntBASIC2.84□□□□□ -1.95
COL8A1P27658 CST9LP2-201ENST00000437612 320 ntBASIC2.84□□□□□ -1.95
COL8A1P27658 AL606517.2-201ENST00000442855 241 ntBASIC2.84□□□□□ -1.95
COL8A1P27658 STAG3L5P-204ENST00000443759 179 ntBASIC2.84□□□□□ -1.95
COL8A1P27658 AC006539.3-201ENST00000454258 129 ntBASIC2.84□□□□□ -1.95
COL8A1P27658 RNU6-687P-201ENST00000516443 89 ntBASIC2.84□□□□□ -1.95
COL8A1P27658 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.84□□□□□ -1.95
COL8A1P27658 MTND5P40-201ENST00000559945 246 ntBASIC2.84□□□□□ -1.95
COL8A1P27658 MIR4524B-201ENST00000581569 115 ntBASIC2.84□□□□□ -1.95
COL8A1P27658 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.84□□□□□ -1.95
COL8A1P27658 AC008163.1-202ENST00000636004 2889 ntBASIC2.84□□□□□ -1.96
COL8A1P27658 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
COL8A1P27658 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
COL8A1P27658 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
COL8A1P27658 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL8A1P27658 RNU6-283P-201ENST00000364788 107 ntBASIC2.83□□□□□ -1.96
COL8A1P27658 RNU6-342P-201ENST00000384521 104 ntBASIC2.83□□□□□ -1.96
COL8A1P27658 RNU6-1321P-201ENST00000390905 107 ntBASIC2.83□□□□□ -1.96
COL8A1P27658 Y_RNA.681-201ENST00000516445 113 ntBASIC2.83□□□□□ -1.96
COL8A1P27658 SNORD67.1-201ENST00000516618 108 ntBASIC2.83□□□□□ -1.96
COL8A1P27658 MIR2682-201ENST00000580305 110 ntBASIC2.83□□□□□ -1.96
COL8A1P27658 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.83□□□□□ -1.96
COL8A1P27658 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
COL8A1P27658 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.83□□□□□ -1.96
COL8A1P27658 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.83□□□□□ -1.96
COL8A1P27658 AC007336.1-201ENST00000576365 3828 ntBASIC2.83□□□□□ -1.96
COL8A1P27658 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
COL8A1P27658 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL8A1P27658 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL8A1P27658 SNORD114-10-201ENST00000363409 72 ntBASIC2.82□□□□□ -1.96
COL8A1P27658 RNU6-833P-201ENST00000363486 107 ntBASIC2.82□□□□□ -1.96
COL8A1P27658 SNORD114-6-201ENST00000364393 72 ntBASIC2.82□□□□□ -1.96
COL8A1P27658 SNORA25.9-201ENST00000365087 128 ntBASIC2.82□□□□□ -1.96
COL8A1P27658 MIR218-1-201ENST00000384999 110 ntBASIC2.82□□□□□ -1.96
COL8A1P27658 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
COL8A1P27658 RNU6-913P-201ENST00000390913 95 ntBASIC2.82□□□□□ -1.96
COL8A1P27658 AC245047.7-201ENST00000440265 293 ntBASIC2.82□□□□□ -1.96
COL8A1P27658 RN7SL594P-201ENST00000470590 287 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms