Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 MTND1P7-201ENST00000632801 297 ntBASIC0.58□□□□□ -2.32
XRCC1P18887 RNU6-1138P-201ENST00000365359 106 ntBASIC0.57□□□□□ -2.32
XRCC1P18887 RNU6-1335P-201ENST00000365426 107 ntBASIC0.57□□□□□ -2.32
XRCC1P18887 MIR570-201ENST00000384917 97 ntBASIC0.57□□□□□ -2.32
XRCC1P18887 RNU6-308P-201ENST00000390957 107 ntBASIC0.57□□□□□ -2.32
XRCC1P18887 PMCHL1-202ENST00000423102 261 ntBASIC0.57□□□□□ -2.32
XRCC1P18887 RNU6-1132P-201ENST00000459214 107 ntBASIC0.57□□□□□ -2.32
XRCC1P18887 RNU6-397P-201ENST00000516226 104 ntBASIC0.57□□□□□ -2.32
XRCC1P18887 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.57□□□□□ -2.32
XRCC1P18887 MIR4662B-201ENST00000579498 81 ntBASIC0.57□□□□□ -2.32
XRCC1P18887 uc_338.4-201ENST00000616635 176 ntBASIC0.57□□□□□ -2.32
XRCC1P18887 AC243994.1-201ENST00000618627 109 ntBASIC0.57□□□□□ -2.32
XRCC1P18887 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.56□□□□□ -2.32
XRCC1P18887 RNA5SP347-201ENST00000362445 119 ntBASIC0.56□□□□□ -2.32
XRCC1P18887 RNU6-580P-201ENST00000365159 107 ntBASIC0.56□□□□□ -2.32
XRCC1P18887 RNU6-290P-201ENST00000365212 101 ntBASIC0.56□□□□□ -2.32
XRCC1P18887 RNU6-326P-201ENST00000365480 107 ntBASIC0.56□□□□□ -2.32
XRCC1P18887 Y_RNA.389-201ENST00000383924 113 ntBASIC0.56□□□□□ -2.32
XRCC1P18887 RNU6-102P-201ENST00000384485 104 ntBASIC0.56□□□□□ -2.32
XRCC1P18887 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
XRCC1P18887 SNORA53-201ENST00000391141 249 ntBASIC0.56□□□□□ -2.32
XRCC1P18887 AC092628.1-201ENST00000436250 252 ntBASIC0.56□□□□□ -2.32
XRCC1P18887 MTATP6P23-201ENST00000440153 476 ntBASIC0.56□□□□□ -2.32
XRCC1P18887 MRPS35P2-201ENST00000508242 191 ntBASIC0.56□□□□□ -2.32
XRCC1P18887 RNU6-126P-201ENST00000516685 103 ntBASIC0.56□□□□□ -2.32
XRCC1P18887 RNU2-31P-201ENST00000516954 155 ntBASIC0.56□□□□□ -2.32
XRCC1P18887 MIR548AO-201ENST00000579992 96 ntBASIC0.56□□□□□ -2.32
XRCC1P18887 MIR5688-201ENST00000580619 83 ntBASIC0.56□□□□□ -2.32
XRCC1P18887 AP000753.3-201ENST00000604083 169 ntBASIC0.56□□□□□ -2.32
XRCC1P18887 RAC1P9-201ENST00000604990 392 ntBASIC0.56□□□□□ -2.32
XRCC1P18887 AL021707.8-201ENST00000609428 183 ntBASIC0.56□□□□□ -2.32
XRCC1P18887 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.56□□□□□ -2.32
XRCC1P18887 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.56□□□□□ -2.32
XRCC1P18887 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
XRCC1P18887 Y_RNA.31-201ENST00000362574 102 ntBASIC0.55□□□□□ -2.32
XRCC1P18887 Y_RNA.419-201ENST00000384041 102 ntBASIC0.55□□□□□ -2.32
XRCC1P18887 RNU6-514P-201ENST00000384208 107 ntBASIC0.55□□□□□ -2.32
XRCC1P18887 Y_RNA.547-201ENST00000384654 119 ntBASIC0.55□□□□□ -2.32
XRCC1P18887 SNORD105-201ENST00000386910 85 ntBASIC0.55□□□□□ -2.32
XRCC1P18887 AC087499.4-201ENST00000448505 178 ntBASIC0.55□□□□□ -2.32
XRCC1P18887 snoU13.16-201ENST00000459350 104 ntBASIC0.55□□□□□ -2.32
XRCC1P18887 Y_RNA.637-201ENST00000459424 114 ntBASIC0.55□□□□□ -2.32
XRCC1P18887 RNU7-149P-201ENST00000516739 59 ntBASIC0.55□□□□□ -2.32
XRCC1P18887 SNORA40.15-201ENST00000516884 107 ntBASIC0.55□□□□□ -2.32
XRCC1P18887 MIR5692C2-201ENST00000577959 77 ntBASIC0.55□□□□□ -2.32
XRCC1P18887 MIR4724-201ENST00000579485 89 ntBASIC0.55□□□□□ -2.32
XRCC1P18887 AC012433.1-201ENST00000588916 398 ntBASIC0.55□□□□□ -2.32
XRCC1P18887 AL355297.3-201ENST00000604082 446 ntBASIC0.55□□□□□ -2.32
XRCC1P18887 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
XRCC1P18887 PVT1_3.1-201ENST00000620853 95 ntBASIC0.55□□□□□ -2.32
XRCC1P18887 MIR367-201ENST00000362299 68 ntBASIC0.54□□□□□ -2.32
XRCC1P18887 RNU6-1272P-201ENST00000362776 107 ntBASIC0.54□□□□□ -2.32
XRCC1P18887 Y_RNA.128-201ENST00000363391 112 ntBASIC0.54□□□□□ -2.32
XRCC1P18887 Y_RNA.276-201ENST00000364732 109 ntBASIC0.54□□□□□ -2.32
XRCC1P18887 SNORA24-201ENST00000384096 131 ntBASIC0.54□□□□□ -2.32
XRCC1P18887 Y_RNA.509-201ENST00000384506 99 ntBASIC0.54□□□□□ -2.32
XRCC1P18887 RNU1-119P-201ENST00000391122 165 ntBASIC0.54□□□□□ -2.32
XRCC1P18887 MIR936-201ENST00000401264 98 ntBASIC0.54□□□□□ -2.32
XRCC1P18887 MIR548O-201ENST00000408583 114 ntBASIC0.54□□□□□ -2.32
XRCC1P18887 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
XRCC1P18887 Y_RNA.631-201ENST00000459607 101 ntBASIC0.54□□□□□ -2.32
XRCC1P18887 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.54□□□□□ -2.32
XRCC1P18887 AL117351.2-201ENST00000513571 157 ntBASIC0.54□□□□□ -2.32
XRCC1P18887 MIR4264-201ENST00000583520 66 ntBASIC0.54□□□□□ -2.32
XRCC1P18887 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.54□□□□□ -2.32
XRCC1P18887 AL160413.1-201ENST00000622780 310 ntBASIC0.54□□□□□ -2.32
XRCC1P18887 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
XRCC1P18887 SNORA25.1-201ENST00000362326 128 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 SNORD115-34-201ENST00000362441 82 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 SNORD115-12-201ENST00000362583 82 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 SNORD115-29-201ENST00000362834 82 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 SNORD115-9-201ENST00000362912 82 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 SNORD115-21-201ENST00000362963 81 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 SNORD115-14-201ENST00000363090 81 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 SNORD115-13-201ENST00000363358 82 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 SNORD115-41-201ENST00000363608 82 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 SNORD115-11-201ENST00000363616 82 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 SNORD115-5-201ENST00000363633 82 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 SNORD115-39-201ENST00000363694 82 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 SNORD115-4-201ENST00000363810 82 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 SNORD115-16-201ENST00000363887 82 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 SNORD115-6-201ENST00000363942 82 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 SNORD115-42-201ENST00000364273 82 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 SNORD115-15-201ENST00000364809 81 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 SNORD115-1-201ENST00000364961 82 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 SNORD115-26-201ENST00000365067 82 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 SNORD115-10-201ENST00000365073 81 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 SNORD115-43-201ENST00000365503 82 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 SNORD115-36-201ENST00000365629 82 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 Y_RNA.460-201ENST00000384255 102 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 RNU6-342P-201ENST00000384521 104 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 MIR613-201ENST00000385248 95 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 RNU6-1143P-201ENST00000516125 104 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 RNU7-25P-201ENST00000516544 62 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.53□□□□□ -2.32
XRCC1P18887 SNORD115-40-201ENST00000606510 82 ntBASIC0.53□□□□□ -2.32
XRCC1P18887 Y_RNA.152-201ENST00000363578 100 ntBASIC0.52□□□□□ -2.33
XRCC1P18887 RNU6-770P-201ENST00000363929 105 ntBASIC0.52□□□□□ -2.33
XRCC1P18887 RNA5SP499-201ENST00000363982 119 ntBASIC0.52□□□□□ -2.33
XRCC1P18887 RNU6-450P-201ENST00000364654 107 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms