Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.73□□□□□ -2.13
HOXC6P09630 MIR6844-201ENST00000637122 62 ntBASIC1.73□□□□□ -2.13
HOXC6P09630 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HOXC6P09630 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
HOXC6P09630 RNU6-978P-201ENST00000364371 103 ntBASIC1.72□□□□□ -2.13
HOXC6P09630 MIR489-201ENST00000384923 84 ntBASIC1.72□□□□□ -2.13
HOXC6P09630 SNORA48.1-201ENST00000390879 135 ntBASIC1.72□□□□□ -2.13
HOXC6P09630 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.72□□□□□ -2.13
HOXC6P09630 AL158823.1-201ENST00000418441 478 ntBASIC1.72□□□□□ -2.13
HOXC6P09630 FTH1P12-201ENST00000432137 551 ntBASIC1.72□□□□□ -2.13
HOXC6P09630 RNA5SP437-201ENST00000517249 129 ntBASIC1.72□□□□□ -2.13
HOXC6P09630 SUB1P4-201ENST00000566062 339 ntBASIC1.72□□□□□ -2.13
HOXC6P09630 MIR548X2-201ENST00000579776 100 ntBASIC1.72□□□□□ -2.13
HOXC6P09630 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.72□□□□□ -2.13
HOXC6P09630 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HOXC6P09630 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HOXC6P09630 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.71□□□□□ -2.14
HOXC6P09630 RNU6-1084P-201ENST00000362498 107 ntBASIC1.71□□□□□ -2.14
HOXC6P09630 RNU6-199P-201ENST00000362954 107 ntBASIC1.71□□□□□ -2.14
HOXC6P09630 RNU6-112P-201ENST00000363599 104 ntBASIC1.71□□□□□ -2.14
HOXC6P09630 RNU6-1138P-201ENST00000365359 106 ntBASIC1.71□□□□□ -2.14
HOXC6P09630 RNU6-296P-201ENST00000384608 107 ntBASIC1.71□□□□□ -2.14
HOXC6P09630 Y_RNA.568-201ENST00000384742 113 ntBASIC1.71□□□□□ -2.14
HOXC6P09630 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
HOXC6P09630 AL606753.1-201ENST00000427435 87 ntBASIC1.71□□□□□ -2.14
HOXC6P09630 AC245517.4-201ENST00000448601 281 ntBASIC1.71□□□□□ -2.14
HOXC6P09630 RNU1-123P-201ENST00000458950 160 ntBASIC1.71□□□□□ -2.14
HOXC6P09630 Y_RNA.666-201ENST00000516187 112 ntBASIC1.71□□□□□ -2.14
HOXC6P09630 RNU6-789P-201ENST00000517105 102 ntBASIC1.71□□□□□ -2.14
HOXC6P09630 AC112693.2-201ENST00000556538 232 ntBASIC1.71□□□□□ -2.14
HOXC6P09630 AC008507.4-201ENST00000585464 127 ntBASIC1.71□□□□□ -2.14
HOXC6P09630 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.71□□□□□ -2.14
HOXC6P09630 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HOXC6P09630 RNA5SP276-201ENST00000362580 94 ntBASIC1.7□□□□□ -2.14
HOXC6P09630 SNORA63D-201ENST00000364359 132 ntBASIC1.7□□□□□ -2.14
HOXC6P09630 Y_RNA.343-201ENST00000365354 112 ntBASIC1.7□□□□□ -2.14
HOXC6P09630 Y_RNA.393-201ENST00000383936 102 ntBASIC1.7□□□□□ -2.14
HOXC6P09630 AC092991.1-201ENST00000477176 376 ntBASIC1.7□□□□□ -2.14
HOXC6P09630 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.7□□□□□ -2.14
HOXC6P09630 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.7□□□□□ -2.14
HOXC6P09630 Y_RNA.66-201ENST00000362862 102 ntBASIC1.69□□□□□ -2.14
HOXC6P09630 SNORA1-201ENST00000384107 130 ntBASIC1.69□□□□□ -2.14
HOXC6P09630 SNORD61-201ENST00000384252 73 ntBASIC1.69□□□□□ -2.14
HOXC6P09630 RNU6-460P-201ENST00000391158 108 ntBASIC1.69□□□□□ -2.14
HOXC6P09630 MIR513C-201ENST00000401352 84 ntBASIC1.69□□□□□ -2.14
HOXC6P09630 RNU6-257P-201ENST00000410238 98 ntBASIC1.69□□□□□ -2.14
HOXC6P09630 RNU2-7P-201ENST00000410794 178 ntBASIC1.69□□□□□ -2.14
HOXC6P09630 RPL31P63-201ENST00000422565 375 ntBASIC1.69□□□□□ -2.14
HOXC6P09630 CALM2P4-201ENST00000430810 426 ntBASIC1.69□□□□□ -2.14
HOXC6P09630 RNU7-197P-201ENST00000458836 62 ntBASIC1.69□□□□□ -2.14
HOXC6P09630 RNA5SP153-201ENST00000516498 76 ntBASIC1.69□□□□□ -2.14
HOXC6P09630 SNORD45.4-201ENST00000516629 73 ntBASIC1.69□□□□□ -2.14
HOXC6P09630 RNU6-365P-201ENST00000517113 106 ntBASIC1.69□□□□□ -2.14
HOXC6P09630 RNU6-1270P-201ENST00000517128 108 ntBASIC1.69□□□□□ -2.14
HOXC6P09630 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HOXC6P09630 MIRLET7C-201ENST00000362160 84 ntBASIC1.68□□□□□ -2.14
HOXC6P09630 U8.1-201ENST00000362843 134 ntBASIC1.68□□□□□ -2.14
HOXC6P09630 Y_RNA.224-201ENST00000364308 111 ntBASIC1.68□□□□□ -2.14
HOXC6P09630 Y_RNA.542-201ENST00000384641 111 ntBASIC1.68□□□□□ -2.14
HOXC6P09630 RNA5SP482-201ENST00000391269 118 ntBASIC1.68□□□□□ -2.14
HOXC6P09630 RNA5SP100-201ENST00000410903 110 ntBASIC1.68□□□□□ -2.14
HOXC6P09630 RNA5SP59-201ENST00000410922 110 ntBASIC1.68□□□□□ -2.14
HOXC6P09630 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.68□□□□□ -2.14
HOXC6P09630 TMSB4XP3-201ENST00000445144 114 ntBASIC1.68□□□□□ -2.14
HOXC6P09630 RPL23AP6-201ENST00000446637 472 ntBASIC1.68□□□□□ -2.14
HOXC6P09630 snoU13.18-201ENST00000459483 104 ntBASIC1.68□□□□□ -2.14
HOXC6P09630 AC114811.1-201ENST00000507207 168 ntBASIC1.68□□□□□ -2.14
HOXC6P09630 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.68□□□□□ -2.14
HOXC6P09630 AL160236.1-201ENST00000556317 195 ntBASIC1.68□□□□□ -2.14
HOXC6P09630 MIR4299-201ENST00000577899 72 ntBASIC1.68□□□□□ -2.14
HOXC6P09630 MIR4762-201ENST00000585261 75 ntBASIC1.68□□□□□ -2.14
HOXC6P09630 AP001485.1-201ENST00000604799 199 ntBASIC1.68□□□□□ -2.14
HOXC6P09630 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.68□□□□□ -2.14
HOXC6P09630 AL353770.2-201ENST00000620024 78 ntBASIC1.68□□□□□ -2.14
HOXC6P09630 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.68□□□□□ -2.14
HOXC6P09630 AC091895.1-201ENST00000624494 256 ntBASIC1.68□□□□□ -2.14
HOXC6P09630 AC132825.6-201ENST00000638861 357 ntBASIC1.68□□□□□ -2.14
HOXC6P09630 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HOXC6P09630 AC010332.2-201ENST00000613083 1904 ntBASIC1.68□□□□□ -2.14
HOXC6P09630 Y_RNA.251-201ENST00000364551 99 ntBASIC1.67□□□□□ -2.14
HOXC6P09630 SNORD50.2-201ENST00000365465 70 ntBASIC1.67□□□□□ -2.14
HOXC6P09630 RNU6-597P-201ENST00000365620 102 ntBASIC1.67□□□□□ -2.14
HOXC6P09630 MIR520A-201ENST00000384862 85 ntBASIC1.67□□□□□ -2.14
HOXC6P09630 Y_RNA.586-201ENST00000391146 98 ntBASIC1.67□□□□□ -2.14
HOXC6P09630 U8.16-201ENST00000391279 133 ntBASIC1.67□□□□□ -2.14
HOXC6P09630 AL354695.1-201ENST00000427935 228 ntBASIC1.67□□□□□ -2.14
HOXC6P09630 RNU6-693P-201ENST00000516134 107 ntBASIC1.67□□□□□ -2.14
HOXC6P09630 RNU1-92P-201ENST00000517017 135 ntBASIC1.67□□□□□ -2.14
HOXC6P09630 Y_RNA.714-201ENST00000517065 90 ntBASIC1.67□□□□□ -2.14
HOXC6P09630 AC007751.1-201ENST00000529260 376 ntBASIC1.67□□□□□ -2.14
HOXC6P09630 MIR3646-201ENST00000578301 84 ntBASIC1.67□□□□□ -2.14
HOXC6P09630 MIR3129-201ENST00000581095 76 ntBASIC1.67□□□□□ -2.14
HOXC6P09630 SNORA4-201ENST00000584302 138 ntBASIC1.67□□□□□ -2.14
HOXC6P09630 AC097639.2-201ENST00000603159 172 ntBASIC1.67□□□□□ -2.14
HOXC6P09630 AL773524.1-201ENST00000614065 229 ntBASIC1.67□□□□□ -2.14
HOXC6P09630 AL157834.3-201ENST00000615543 103 ntBASIC1.67□□□□□ -2.14
HOXC6P09630 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.67□□□□□ -2.14
HOXC6P09630 U1.36-201ENST00000620684 176 ntBASIC1.67□□□□□ -2.14
HOXC6P09630 Y_RNA.420-201ENST00000384043 110 ntBASIC1.66□□□□□ -2.14
HOXC6P09630 RNU6-163P-201ENST00000384396 106 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms