Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 RNU6-1084P-201ENST00000362498 107 ntBASIC1.93□□□□□ -2.1
RHOP08100 Y_RNA.120-201ENST00000363304 110 ntBASIC1.93□□□□□ -2.1
RHOP08100 RNU6-268P-201ENST00000364174 107 ntBASIC1.93□□□□□ -2.1
RHOP08100 RNA5SP37-201ENST00000365420 130 ntBASIC1.93□□□□□ -2.1
RHOP08100 RNU6-424P-201ENST00000384367 105 ntBASIC1.93□□□□□ -2.1
RHOP08100 RNU6-1117P-201ENST00000384525 104 ntBASIC1.93□□□□□ -2.1
RHOP08100 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.93□□□□□ -2.1
RHOP08100 RNA5SP212-201ENST00000391223 107 ntBASIC1.93□□□□□ -2.1
RHOP08100 RNA5SP247-201ENST00000411181 105 ntBASIC1.93□□□□□ -2.1
RHOP08100 SNORD13-201ENST00000459299 104 ntBASIC1.93□□□□□ -2.1
RHOP08100 AP001328.1-201ENST00000528550 176 ntBASIC1.93□□□□□ -2.1
RHOP08100 U7.2-201ENST00000607576 63 ntBASIC1.93□□□□□ -2.1
RHOP08100 MIR8081-201ENST00000611533 95 ntBASIC1.93□□□□□ -2.1
RHOP08100 AL773524.1-201ENST00000614065 229 ntBASIC1.93□□□□□ -2.1
RHOP08100 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RHOP08100 MIR539-201ENST00000365690 78 ntBASIC1.92□□□□□ -2.1
RHOP08100 SNORA1-201ENST00000384107 130 ntBASIC1.92□□□□□ -2.1
RHOP08100 SNORA20-201ENST00000384662 132 ntBASIC1.92□□□□□ -2.1
RHOP08100 AL627390.1-201ENST00000396055 340 ntBASIC1.92□□□□□ -2.1
RHOP08100 MIR548O-201ENST00000408583 114 ntBASIC1.92□□□□□ -2.1
RHOP08100 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.92□□□□□ -2.1
RHOP08100 RPS29P11-201ENST00000496507 171 ntBASIC1.92□□□□□ -2.1
RHOP08100 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.92□□□□□ -2.1
RHOP08100 AC108729.3-201ENST00000513484 108 ntBASIC1.92□□□□□ -2.1
RHOP08100 RNU6-1270P-201ENST00000517128 108 ntBASIC1.92□□□□□ -2.1
RHOP08100 RNU6-915P-201ENST00000364943 103 ntBASIC1.91□□□□□ -2.1
RHOP08100 MIR891A-201ENST00000401237 79 ntBASIC1.91□□□□□ -2.1
RHOP08100 RNU2-7P-201ENST00000410794 178 ntBASIC1.91□□□□□ -2.1
RHOP08100 CALM2P4-201ENST00000430810 426 ntBASIC1.91□□□□□ -2.1
RHOP08100 snoU13.27-201ENST00000459278 104 ntBASIC1.91□□□□□ -2.1
RHOP08100 AC114811.1-201ENST00000507207 168 ntBASIC1.91□□□□□ -2.1
RHOP08100 RNU6-693P-201ENST00000516134 107 ntBASIC1.91□□□□□ -2.1
RHOP08100 RNU6-479P-201ENST00000516348 105 ntBASIC1.91□□□□□ -2.1
RHOP08100 SNORA18.4-201ENST00000516440 124 ntBASIC1.91□□□□□ -2.1
RHOP08100 RNU1-40P-201ENST00000516816 164 ntBASIC1.91□□□□□ -2.1
RHOP08100 RNU1-97P-201ENST00000516872 164 ntBASIC1.91□□□□□ -2.1
RHOP08100 MIR4498-201ENST00000577599 66 ntBASIC1.91□□□□□ -2.1
RHOP08100 MIR3129-201ENST00000581095 76 ntBASIC1.91□□□□□ -2.1
RHOP08100 AL513423.1-201ENST00000621695 132 ntBASIC1.91□□□□□ -2.1
RHOP08100 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.91□□□□□ -2.1
RHOP08100 AL359851.1-201ENST00000569460 4997 ntBASIC1.91□□□□□ -2.1
RHOP08100 Y_RNA.4-201ENST00000362333 112 ntBASIC1.9□□□□□ -2.11
RHOP08100 RNU6-833P-201ENST00000363486 107 ntBASIC1.9□□□□□ -2.11
RHOP08100 Y_RNA.164-201ENST00000363709 102 ntBASIC1.9□□□□□ -2.11
RHOP08100 RNU6-457P-201ENST00000363999 107 ntBASIC1.9□□□□□ -2.11
RHOP08100 Y_RNA.291-201ENST00000364886 113 ntBASIC1.9□□□□□ -2.11
RHOP08100 U8.16-201ENST00000391279 133 ntBASIC1.9□□□□□ -2.11
RHOP08100 AC244636.1-201ENST00000421152 228 ntBASIC1.9□□□□□ -2.11
RHOP08100 AC099513.1-201ENST00000490423 301 ntBASIC1.9□□□□□ -2.11
RHOP08100 RNU7-25P-201ENST00000516544 62 ntBASIC1.9□□□□□ -2.11
RHOP08100 RNA5SP168-201ENST00000516642 112 ntBASIC1.9□□□□□ -2.11
RHOP08100 RNU6-250P-201ENST00000516958 103 ntBASIC1.9□□□□□ -2.11
RHOP08100 MIR4709-201ENST00000577272 72 ntBASIC1.9□□□□□ -2.11
RHOP08100 MIR4299-201ENST00000577899 72 ntBASIC1.9□□□□□ -2.11
RHOP08100 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.9□□□□□ -2.11
RHOP08100 Y_RNA.52-201ENST00000362760 96 ntBASIC1.89□□□□□ -2.11
RHOP08100 RNU6-22P-201ENST00000384355 107 ntBASIC1.89□□□□□ -2.11
RHOP08100 RNU6-163P-201ENST00000384396 106 ntBASIC1.89□□□□□ -2.11
RHOP08100 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
RHOP08100 SNORD77.3-201ENST00000391113 65 ntBASIC1.89□□□□□ -2.11
RHOP08100 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.89□□□□□ -2.11
RHOP08100 RNU6-971P-201ENST00000516920 106 ntBASIC1.89□□□□□ -2.11
RHOP08100 RNU6-1116P-201ENST00000517269 99 ntBASIC1.89□□□□□ -2.11
RHOP08100 RNU2-60P-201ENST00000517290 128 ntBASIC1.89□□□□□ -2.11
RHOP08100 AL096840.1-201ENST00000603287 93 ntBASIC1.89□□□□□ -2.11
RHOP08100 AC021506.2-201ENST00000612354 169 ntBASIC1.89□□□□□ -2.11
RHOP08100 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.89□□□□□ -2.11
RHOP08100 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
RHOP08100 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RHOP08100 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.88□□□□□ -2.11
RHOP08100 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
RHOP08100 RNA5SP138-201ENST00000365098 114 ntBASIC1.88□□□□□ -2.11
RHOP08100 Y_RNA.410-201ENST00000383992 113 ntBASIC1.88□□□□□ -2.11
RHOP08100 RNU6-1081P-201ENST00000384537 107 ntBASIC1.88□□□□□ -2.11
RHOP08100 Y_RNA.547-201ENST00000384654 119 ntBASIC1.88□□□□□ -2.11
RHOP08100 AL603914.1-201ENST00000401964 204 ntBASIC1.88□□□□□ -2.11
RHOP08100 RNU7-34P-201ENST00000459394 64 ntBASIC1.88□□□□□ -2.11
RHOP08100 RNU6-830P-201ENST00000516353 107 ntBASIC1.88□□□□□ -2.11
RHOP08100 RNU6-62P-201ENST00000516526 102 ntBASIC1.88□□□□□ -2.11
RHOP08100 SNORA31.17-201ENST00000516953 127 ntBASIC1.88□□□□□ -2.11
RHOP08100 MIR5197-201ENST00000583721 112 ntBASIC1.88□□□□□ -2.11
RHOP08100 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.88□□□□□ -2.11
RHOP08100 AC134878.1-201ENST00000619901 243 ntBASIC1.88□□□□□ -2.11
RHOP08100 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
RHOP08100 U8.1-201ENST00000362843 134 ntBASIC1.87□□□□□ -2.11
RHOP08100 SNORD115-28-201ENST00000363931 81 ntBASIC1.87□□□□□ -2.11
RHOP08100 Y_RNA.218-201ENST00000364218 104 ntBASIC1.87□□□□□ -2.11
RHOP08100 Y_RNA.280-201ENST00000364765 112 ntBASIC1.87□□□□□ -2.11
RHOP08100 SNORD38C-201ENST00000384381 69 ntBASIC1.87□□□□□ -2.11
RHOP08100 RNA5SP338-201ENST00000410495 85 ntBASIC1.87□□□□□ -2.11
RHOP08100 RNU2-51P-201ENST00000410708 197 ntBASIC1.87□□□□□ -2.11
RHOP08100 AF228730.3-201ENST00000436691 102 ntBASIC1.87□□□□□ -2.11
RHOP08100 AC008267.6-201ENST00000441664 139 ntBASIC1.87□□□□□ -2.11
RHOP08100 RNU6-717P-201ENST00000459076 104 ntBASIC1.87□□□□□ -2.11
RHOP08100 RNA5SP57-201ENST00000459463 123 ntBASIC1.87□□□□□ -2.11
RHOP08100 RNU6-1053P-201ENST00000515930 101 ntBASIC1.87□□□□□ -2.11
RHOP08100 AC011603.4-201ENST00000611325 277 ntBASIC1.87□□□□□ -2.11
RHOP08100 uc_338.20-201ENST00000621563 178 ntBASIC1.87□□□□□ -2.11
RHOP08100 MIR378A-201ENST00000362177 66 ntBASIC1.86□□□□□ -2.11
RHOP08100 SNORD116-14-201ENST00000383894 92 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms