| MT1F | P04733 | RNU6-384P-201 | ENST00000364900 | 104 nt | BASIC | -2.18 | □□□□□ -2.76 | | |
| MT1F | P04733 | RNU6-1179P-201 | ENST00000384667 | 107 nt | BASIC | -2.18 | □□□□□ -2.76 | | |
| MT1F | P04733 | MIR544A-201 | ENST00000384855 | 91 nt | BASIC | -2.18 | □□□□□ -2.76 | | |
| MT1F | P04733 | MIR617-201 | ENST00000385030 | 97 nt | BASIC | -2.18 | □□□□□ -2.76 | | |
| MT1F | P04733 | RNU6-519P-201 | ENST00000410590 | 108 nt | BASIC | -2.18 | □□□□□ -2.76 | | |
| MT1F | P04733 | AC113618.1-201 | ENST00000416747 | 285 nt | BASIC | -2.18 | □□□□□ -2.76 | | |
| MT1F | P04733 | RPL23AP30-201 | ENST00000432419 | 501 nt | BASIC | -2.18 | □□□□□ -2.76 | | |
| MT1F | P04733 | RNU6-531P-201 | ENST00000516694 | 104 nt | BASIC | -2.18 | □□□□□ -2.76 | | |
| MT1F | P04733 | MIR3923-201 | ENST00000579521 | 83 nt | BASIC | -2.18 | □□□□□ -2.76 | | |
| MT1F | P04733 | AC137590.2-201 | ENST00000619709 | 240 nt | BASIC | -2.18 | □□□□□ -2.76 | | |
| MT1F | P04733 | snoZ196.1-201 | ENST00000625269 | 89 nt | BASIC | -2.18 | □□□□□ -2.76 | | |
| MT1F | P04733 | HTN1-201 | ENST00000246896 | 580 nt | APPRIS P1 TSL 1 (best) BASIC | -2.19 | □□□□□ -2.76 | | |
| MT1F | P04733 | FGF7P2-201 | ENST00000332473 | 296 nt | BASIC | -2.19 | □□□□□ -2.76 | | |
| MT1F | P04733 | MIRLET7A3-201 | ENST00000362116 | 74 nt | BASIC | -2.19 | □□□□□ -2.76 | | |
| MT1F | P04733 | Y_RNA.80-201 | ENST00000362996 | 102 nt | BASIC | -2.19 | □□□□□ -2.76 | | |
| MT1F | P04733 | Y_RNA.319-201 | ENST00000365138 | 92 nt | BASIC | -2.19 | □□□□□ -2.76 | | |
| MT1F | P04733 | MIR599-201 | ENST00000385069 | 95 nt | BASIC | -2.19 | □□□□□ -2.76 | | |
| MT1F | P04733 | RNU6-847P-201 | ENST00000411115 | 108 nt | BASIC | -2.19 | □□□□□ -2.76 | | |
| MT1F | P04733 | RNU6-602P-201 | ENST00000411155 | 105 nt | BASIC | -2.19 | □□□□□ -2.76 | | |
| MT1F | P04733 | RPS3AP52-201 | ENST00000435639 | 297 nt | BASIC | -2.19 | □□□□□ -2.76 | | |
| MT1F | P04733 | AL031274.1-201 | ENST00000450334 | 232 nt | BASIC | -2.19 | □□□□□ -2.76 | | |
| MT1F | P04733 | AC022441.3-201 | ENST00000605737 | 136 nt | BASIC | -2.19 | □□□□□ -2.76 | | |
| MT1F | P04733 | RNU6-1290P-201 | ENST00000362957 | 109 nt | BASIC | -2.2 | □□□□□ -2.76 | | |
| MT1F | P04733 | RNU6-839P-201 | ENST00000363347 | 108 nt | BASIC | -2.2 | □□□□□ -2.76 | | |
| MT1F | P04733 | Y_RNA.509-201 | ENST00000384506 | 99 nt | BASIC | -2.2 | □□□□□ -2.76 | | |
| MT1F | P04733 | RNU6-878P-201 | ENST00000384578 | 110 nt | BASIC | -2.2 | □□□□□ -2.76 | | |
| MT1F | P04733 | Y_RNA.558-201 | ENST00000384685 | 113 nt | BASIC | -2.2 | □□□□□ -2.76 | | |
| MT1F | P04733 | RNU4-55P-201 | ENST00000410731 | 137 nt | BASIC | -2.2 | □□□□□ -2.76 | | |
| MT1F | P04733 | HMGN3P1-201 | ENST00000453847 | 193 nt | BASIC | -2.2 | □□□□□ -2.76 | | |
| MT1F | P04733 | snoU109.3-201 | ENST00000459477 | 145 nt | BASIC | -2.2 | □□□□□ -2.76 | | |
| MT1F | P04733 | RNU6-221P-201 | ENST00000459541 | 99 nt | BASIC | -2.2 | □□□□□ -2.76 | | |
| MT1F | P04733 | AC026410.2-201 | ENST00000460281 | 156 nt | BASIC | -2.2 | □□□□□ -2.76 | | |
| MT1F | P04733 | RNU2-13P-201 | ENST00000515909 | 113 nt | BASIC | -2.2 | □□□□□ -2.76 | | |
| MT1F | P04733 | AP001542.1-201 | ENST00000591314 | 200 nt | BASIC | -2.2 | □□□□□ -2.76 | | |
| MT1F | P04733 | AP001282.2-201 | ENST00000616149 | 309 nt | BASIC | -2.2 | □□□□□ -2.76 | | |
| MT1F | P04733 | RNU6-1260P-201 | ENST00000362944 | 107 nt | BASIC | -2.21 | □□□□□ -2.76 | | |
| MT1F | P04733 | RNU6-774P-201 | ENST00000363238 | 107 nt | BASIC | -2.21 | □□□□□ -2.76 | | |
| MT1F | P04733 | RNU6-1251P-201 | ENST00000364502 | 107 nt | BASIC | -2.21 | □□□□□ -2.76 | | |
| MT1F | P04733 | Y_RNA.348-201 | ENST00000365403 | 103 nt | BASIC | -2.21 | □□□□□ -2.76 | | |
| MT1F | P04733 | RNU6-1040P-201 | ENST00000383974 | 107 nt | BASIC | -2.21 | □□□□□ -2.76 | | |
| MT1F | P04733 | RNU6-1242P-201 | ENST00000391052 | 103 nt | BASIC | -2.21 | □□□□□ -2.76 | | |
| MT1F | P04733 | MTND1P21-201 | ENST00000412991 | 285 nt | BASIC | -2.21 | □□□□□ -2.76 | | |
| MT1F | P04733 | AL354751.2-201 | ENST00000415471 | 210 nt | BASIC | -2.21 | □□□□□ -2.76 | | |
| MT1F | P04733 | AC108733.1-201 | ENST00000479244 | 705 nt | TSL 3 BASIC | -2.21 | □□□□□ -2.76 | | |
| MT1F | P04733 | CCDC39-AS1-201 | ENST00000495357 | 283 nt | TSL 3 BASIC | -2.21 | □□□□□ -2.76 | | |
| MT1F | P04733 | RNU7-181P-201 | ENST00000517234 | 74 nt | BASIC | -2.21 | □□□□□ -2.76 | | |
| MT1F | P04733 | SNORD39.3-201 | ENST00000584451 | 71 nt | BASIC | -2.21 | □□□□□ -2.76 | | |
| MT1F | P04733 | Y_RNA.179-201 | ENST00000363844 | 90 nt | BASIC | -2.22 | □□□□□ -2.76 | | |
| MT1F | P04733 | Y_RNA.353-201 | ENST00000365440 | 108 nt | BASIC | -2.22 | □□□□□ -2.76 | | |
| MT1F | P04733 | SNORD65-201 | ENST00000391079 | 73 nt | BASIC | -2.22 | □□□□□ -2.76 | | |
| MT1F | P04733 | CoTC_ribozyme.1-201 | ENST00000408104 | 192 nt | BASIC | -2.22 | □□□□□ -2.76 | | |
| MT1F | P04733 | RNU6-325P-201 | ENST00000411132 | 105 nt | BASIC | -2.22 | □□□□□ -2.76 | | |
| MT1F | P04733 | AC010975.2-201 | ENST00000427781 | 588 nt | BASIC | -2.22 | □□□□□ -2.76 | | |
| MT1F | P04733 | MRPS10P1-201 | ENST00000448483 | 130 nt | BASIC | -2.22 | □□□□□ -2.76 | | |
| MT1F | P04733 | PLCH1-AS2-201 | ENST00000472913 | 408 nt | TSL 2 BASIC | -2.22 | □□□□□ -2.76 | | |
| MT1F | P04733 | AC109479.2-201 | ENST00000517842 | 174 nt | BASIC | -2.22 | □□□□□ -2.76 | | |
| MT1F | P04733 | LINC01491-201 | ENST00000558434 | 505 nt | TSL 3 BASIC | -2.22 | □□□□□ -2.76 | | |
| MT1F | P04733 | AC090616.2-202 | ENST00000584248 | 222 nt | BASIC | -2.22 | □□□□□ -2.76 | | |
| MT1F | P04733 | AL450270.1-201 | ENST00000606160 | 391 nt | BASIC | -2.22 | □□□□□ -2.76 | | |
| MT1F | P04733 | FAM13A-AS1_1.1-201 | ENST00000612555 | 119 nt | BASIC | -2.22 | □□□□□ -2.76 | | |
| MT1F | P04733 | RNU4-58P-201 | ENST00000363192 | 141 nt | BASIC | -2.23 | □□□□□ -2.77 | | |
| MT1F | P04733 | Y_RNA.239-201 | ENST00000364444 | 113 nt | BASIC | -2.23 | □□□□□ -2.77 | | |
| MT1F | P04733 | SNORD51.1-201 | ENST00000365405 | 77 nt | BASIC | -2.23 | □□□□□ -2.77 | | |
| MT1F | P04733 | RNU6-1267P-201 | ENST00000410747 | 107 nt | BASIC | -2.23 | □□□□□ -2.77 | | |
| MT1F | P04733 | MTCO1P57-201 | ENST00000432182 | 261 nt | BASIC | -2.23 | □□□□□ -2.77 | | |
| MT1F | P04733 | AC023449.1-201 | ENST00000454464 | 154 nt | BASIC | -2.23 | □□□□□ -2.77 | | |
| MT1F | P04733 | SNORA43.2-201 | ENST00000516652 | 128 nt | BASIC | -2.23 | □□□□□ -2.77 | | |
| MT1F | P04733 | RNU6-861P-201 | ENST00000516745 | 106 nt | BASIC | -2.23 | □□□□□ -2.77 | | |
| MT1F | P04733 | RNA5SP454-201 | ENST00000517231 | 127 nt | BASIC | -2.23 | □□□□□ -2.77 | | |
| MT1F | P04733 | FRG2DP-202 | ENST00000566967 | 323 nt | BASIC | -2.23 | □□□□□ -2.77 | | |
| MT1F | P04733 | MIR4762-201 | ENST00000585261 | 75 nt | BASIC | -2.23 | □□□□□ -2.77 | | |
| MT1F | P04733 | LUZP6-201 | ENST00000589735 | 177 nt | APPRIS P1 BASIC | -2.23 | □□□□□ -2.77 | | |
| MT1F | P04733 | AL121757.2-201 | ENST00000611223 | 313 nt | BASIC | -2.23 | □□□□□ -2.77 | | |
| MT1F | P04733 | RNU6-449P-201 | ENST00000383914 | 107 nt | BASIC | -2.24 | □□□□□ -2.77 | | |
| MT1F | P04733 | SNORA51.5-201 | ENST00000384126 | 131 nt | BASIC | -2.24 | □□□□□ -2.77 | | |
| MT1F | P04733 | RNU6-429P-201 | ENST00000384582 | 108 nt | BASIC | -2.24 | □□□□□ -2.77 | | |
| MT1F | P04733 | SNORD73A-201 | ENST00000386062 | 65 nt | BASIC | -2.24 | □□□□□ -2.77 | | |
| MT1F | P04733 | BX295541.1-201 | ENST00000417774 | 250 nt | BASIC | -2.24 | □□□□□ -2.77 | | |
| MT1F | P04733 | MTND1P34-201 | ENST00000438556 | 671 nt | BASIC | -2.24 | □□□□□ -2.77 | | |
| MT1F | P04733 | AL358944.1-201 | ENST00000528537 | 144 nt | BASIC | -2.24 | □□□□□ -2.77 | | |
| MT1F | P04733 | MIR8055-201 | ENST00000610739 | 97 nt | BASIC | -2.24 | □□□□□ -2.77 | | |
| MT1F | P04733 | FAS-AS1.1-201 | ENST00000615327 | 126 nt | BASIC | -2.24 | □□□□□ -2.77 | | |
| MT1F | P04733 | SNORD114-13-201 | ENST00000364377 | 74 nt | BASIC | -2.25 | □□□□□ -2.77 | | |
| MT1F | P04733 | FBXO11-203 | ENST00000405808 | 299 nt | TSL 5 BASIC | -2.25 | □□□□□ -2.77 | | |
| MT1F | P04733 | MIR548Q-201 | ENST00000408404 | 100 nt | BASIC | -2.25 | □□□□□ -2.77 | | |
| MT1F | P04733 | Y_RNA.622-201 | ENST00000411091 | 108 nt | BASIC | -2.25 | □□□□□ -2.77 | | |
| MT1F | P04733 | AL355314.1-201 | ENST00000453639 | 316 nt | TSL 5 BASIC | -2.25 | □□□□□ -2.77 | | |
| MT1F | P04733 | AC015724.1-201 | ENST00000478577 | 156 nt | BASIC | -2.25 | □□□□□ -2.77 | | |
| MT1F | P04733 | RNU7-172P-201 | ENST00000517125 | 64 nt | BASIC | -2.25 | □□□□□ -2.77 | | |
| MT1F | P04733 | CCDC7-207 | ENST00000535327 | 700 nt | APPRIS ALT2 TSL 1 (best) BASIC | -2.25 | □□□□□ -2.77 | | |
| MT1F | P04733 | MIR23C-201 | ENST00000579846 | 100 nt | BASIC | -2.25 | □□□□□ -2.77 | | |
| MT1F | P04733 | RNU6-1084P-201 | ENST00000362498 | 107 nt | BASIC | -2.26 | □□□□□ -2.77 | | |
| MT1F | P04733 | RNU6-608P-201 | ENST00000383927 | 104 nt | BASIC | -2.26 | □□□□□ -2.77 | | |
| MT1F | P04733 | Y_RNA.394-201 | ENST00000383942 | 103 nt | BASIC | -2.26 | □□□□□ -2.77 | | |
| MT1F | P04733 | RNU6-637P-201 | ENST00000384050 | 107 nt | BASIC | -2.26 | □□□□□ -2.77 | | |
| MT1F | P04733 | RNU6-102P-201 | ENST00000384485 | 104 nt | BASIC | -2.26 | □□□□□ -2.77 | | |
| MT1F | P04733 | MIR586-201 | ENST00000385035 | 97 nt | BASIC | -2.26 | □□□□□ -2.77 | | |
| MT1F | P04733 | RNU2-62P-201 | ENST00000410868 | 191 nt | BASIC | -2.26 | □□□□□ -2.77 | | |
| MT1F | P04733 | MTCO2P27-201 | ENST00000420740 | 428 nt | BASIC | -2.26 | □□□□□ -2.77 | | |
| MT1F | P04733 | AC064874.1-202 | ENST00000440101 | 287 nt | TSL 3 BASIC | -2.26 | □□□□□ -2.77 | | |