Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 MIR378D2-201ENST00000580636 98 ntBASIC1.66□□□□□ -2.14
LDLRP01130 AL049861.1-201ENST00000603130 150 ntBASIC1.66□□□□□ -2.14
LDLRP01130 BX248123.2-201ENST00000606318 124 ntBASIC1.66□□□□□ -2.14
LDLRP01130 AP001340.1-201ENST00000624405 217 ntBASIC1.66□□□□□ -2.14
LDLRP01130 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.66□□□□□ -2.14
LDLRP01130 SNORA63D-201ENST00000364359 132 ntBASIC1.65□□□□□ -2.15
LDLRP01130 RNA5SP363-201ENST00000365072 115 ntBASIC1.65□□□□□ -2.15
LDLRP01130 RNU6-439P-201ENST00000384188 106 ntBASIC1.65□□□□□ -2.15
LDLRP01130 Y_RNA.521-201ENST00000384560 114 ntBASIC1.65□□□□□ -2.15
LDLRP01130 Y_RNA.525-201ENST00000384570 113 ntBASIC1.65□□□□□ -2.15
LDLRP01130 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
LDLRP01130 Y_RNA.629-201ENST00000411368 105 ntBASIC1.65□□□□□ -2.15
LDLRP01130 AC010154.1-201ENST00000425857 269 ntBASIC1.65□□□□□ -2.15
LDLRP01130 SNORD11-201ENST00000459124 84 ntBASIC1.65□□□□□ -2.15
LDLRP01130 RNU6-197P-201ENST00000516680 100 ntBASIC1.65□□□□□ -2.15
LDLRP01130 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.65□□□□□ -2.15
LDLRP01130 MIR4285-201ENST00000581001 85 ntBASIC1.65□□□□□ -2.15
LDLRP01130 AC022217.4-201ENST00000604389 163 ntBASIC1.65□□□□□ -2.15
LDLRP01130 AC103810.8-201ENST00000607347 118 ntBASIC1.65□□□□□ -2.15
LDLRP01130 MIR8081-201ENST00000611533 95 ntBASIC1.65□□□□□ -2.15
LDLRP01130 Y_RNA.91-201ENST00000363042 107 ntBASIC1.64□□□□□ -2.15
LDLRP01130 RNU6-1209P-201ENST00000363655 107 ntBASIC1.64□□□□□ -2.15
LDLRP01130 RNU4-13P-201ENST00000364019 141 ntBASIC1.64□□□□□ -2.15
LDLRP01130 Y_RNA.203-201ENST00000364106 102 ntBASIC1.64□□□□□ -2.15
LDLRP01130 Y_RNA.267-201ENST00000364679 109 ntBASIC1.64□□□□□ -2.15
LDLRP01130 Y_RNA.294-201ENST00000364916 102 ntBASIC1.64□□□□□ -2.15
LDLRP01130 RNU6-215P-201ENST00000365169 102 ntBASIC1.64□□□□□ -2.15
LDLRP01130 Y_RNA.353-201ENST00000365440 108 ntBASIC1.64□□□□□ -2.15
LDLRP01130 MIR7-2-201ENST00000384970 110 ntBASIC1.64□□□□□ -2.15
LDLRP01130 SNORA75.5-201ENST00000391291 81 ntBASIC1.64□□□□□ -2.15
LDLRP01130 RNU2-55P-201ENST00000411146 174 ntBASIC1.64□□□□□ -2.15
LDLRP01130 AC245047.3-201ENST00000429428 127 ntBASIC1.64□□□□□ -2.15
LDLRP01130 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.64□□□□□ -2.15
LDLRP01130 RPS26P45-201ENST00000471748 340 ntBASIC1.64□□□□□ -2.15
LDLRP01130 SNORD77.4-201ENST00000516158 81 ntBASIC1.64□□□□□ -2.15
LDLRP01130 RNU6-659P-201ENST00000516454 104 ntBASIC1.64□□□□□ -2.15
LDLRP01130 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.64□□□□□ -2.15
LDLRP01130 AL160236.1-201ENST00000556317 195 ntBASIC1.64□□□□□ -2.15
LDLRP01130 RPL23AP91-201ENST00000569211 455 ntBASIC1.64□□□□□ -2.15
LDLRP01130 MIR4255-201ENST00000579351 72 ntBASIC1.64□□□□□ -2.15
LDLRP01130 uc_338.4-201ENST00000616635 176 ntBASIC1.64□□□□□ -2.15
LDLRP01130 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.64□□□□□ -2.15
LDLRP01130 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.64□□□□□ -2.15
LDLRP01130 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
LDLRP01130 AC018630.2-201ENST00000534866 2403 ntBASIC1.64□□□□□ -2.15
LDLRP01130 MIR539-201ENST00000365690 78 ntBASIC1.63□□□□□ -2.15
LDLRP01130 RNU6-80P-201ENST00000384195 107 ntBASIC1.63□□□□□ -2.15
LDLRP01130 MIR562-201ENST00000384894 95 ntBASIC1.63□□□□□ -2.15
LDLRP01130 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.63□□□□□ -2.15
LDLRP01130 RNU7-107P-201ENST00000459121 61 ntBASIC1.63□□□□□ -2.15
LDLRP01130 RNU7-95P-201ENST00000459222 64 ntBASIC1.63□□□□□ -2.15
LDLRP01130 NDUFA4P2-201ENST00000489989 244 ntBASIC1.63□□□□□ -2.15
LDLRP01130 RNU4-57P-201ENST00000515980 135 ntBASIC1.63□□□□□ -2.15
LDLRP01130 Y_RNA.686-201ENST00000516548 134 ntBASIC1.63□□□□□ -2.15
LDLRP01130 RNU2-56P-201ENST00000516826 190 ntBASIC1.63□□□□□ -2.15
LDLRP01130 AC011604.1-201ENST00000545978 196 ntBASIC1.63□□□□□ -2.15
LDLRP01130 SNORA4-201ENST00000584302 138 ntBASIC1.63□□□□□ -2.15
LDLRP01130 AC091178.2-201ENST00000584401 117 ntBASIC1.63□□□□□ -2.15
LDLRP01130 AC097639.2-201ENST00000603159 172 ntBASIC1.63□□□□□ -2.15
LDLRP01130 AL512598.1-201ENST00000610158 273 ntBASIC1.63□□□□□ -2.15
LDLRP01130 TUG1_4.1-201ENST00000619464 181 ntBASIC1.63□□□□□ -2.15
LDLRP01130 MIR6079-201ENST00000635807 62 ntBASIC1.63□□□□□ -2.15
LDLRP01130 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.63□□□□□ -2.15
LDLRP01130 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
LDLRP01130 Y_RNA.634-201ENST00000364811 113 ntBASIC1.62□□□□□ -2.15
LDLRP01130 RNU6-915P-201ENST00000364943 103 ntBASIC1.62□□□□□ -2.15
LDLRP01130 Y_RNA.432-201ENST00000384087 111 ntBASIC1.62□□□□□ -2.15
LDLRP01130 Y_RNA.486-201ENST00000384398 107 ntBASIC1.62□□□□□ -2.15
LDLRP01130 MIR934-201ENST00000401241 83 ntBASIC1.62□□□□□ -2.15
LDLRP01130 MIR1276-201ENST00000408707 83 ntBASIC1.62□□□□□ -2.15
LDLRP01130 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.62□□□□□ -2.15
LDLRP01130 AC233266.1-201ENST00000454518 96 ntBASIC1.62□□□□□ -2.15
LDLRP01130 snoU13.27-201ENST00000459278 104 ntBASIC1.62□□□□□ -2.15
LDLRP01130 RNU6-1291P-201ENST00000516591 104 ntBASIC1.62□□□□□ -2.15
LDLRP01130 RNA5SP481-201ENST00000516814 122 ntBASIC1.62□□□□□ -2.15
LDLRP01130 RNU2-60P-201ENST00000517290 128 ntBASIC1.62□□□□□ -2.15
LDLRP01130 AP001328.1-201ENST00000528550 176 ntBASIC1.62□□□□□ -2.15
LDLRP01130 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.62□□□□□ -2.15
LDLRP01130 MIR3198-2-201ENST00000577868 80 ntBASIC1.62□□□□□ -2.15
LDLRP01130 AC242852.1-201ENST00000612151 96 ntBASIC1.62□□□□□ -2.15
LDLRP01130 AC244015.1-201ENST00000622301 99 ntBASIC1.62□□□□□ -2.15
LDLRP01130 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
LDLRP01130 MIR126-201ENST00000362291 85 ntBASIC1.61□□□□□ -2.15
LDLRP01130 RNU6-508P-201ENST00000363231 103 ntBASIC1.61□□□□□ -2.15
LDLRP01130 Y_RNA.273-201ENST00000364703 102 ntBASIC1.61□□□□□ -2.15
LDLRP01130 Y_RNA.280-201ENST00000364765 112 ntBASIC1.61□□□□□ -2.15
LDLRP01130 RNU6-1080P-201ENST00000383982 107 ntBASIC1.61□□□□□ -2.15
LDLRP01130 Y_RNA.563-201ENST00000384707 108 ntBASIC1.61□□□□□ -2.15
LDLRP01130 RNU7-34P-201ENST00000459394 64 ntBASIC1.61□□□□□ -2.15
LDLRP01130 RNU7-94P-201ENST00000459576 63 ntBASIC1.61□□□□□ -2.15
LDLRP01130 RPS29P11-201ENST00000496507 171 ntBASIC1.61□□□□□ -2.15
LDLRP01130 RNU6-1299P-201ENST00000516316 100 ntBASIC1.61□□□□□ -2.15
LDLRP01130 RNA5SP153-201ENST00000516498 76 ntBASIC1.61□□□□□ -2.15
LDLRP01130 RNU6-1096P-201ENST00000517089 102 ntBASIC1.61□□□□□ -2.15
LDLRP01130 AC011603.4-201ENST00000611325 277 ntBASIC1.61□□□□□ -2.15
LDLRP01130 MIR6504-201ENST00000613520 61 ntBASIC1.61□□□□□ -2.15
LDLRP01130 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.61□□□□□ -2.15
LDLRP01130 U8.1-201ENST00000362843 134 ntBASIC1.6□□□□□ -2.15
LDLRP01130 Y_RNA.66-201ENST00000362862 102 ntBASIC1.6□□□□□ -2.15
LDLRP01130 RNU6-414P-201ENST00000363705 104 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 213.9 ms