Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 Y_RNA.353-201ENST00000365440 108 ntBASIC2.07□□□□□ -2.08
CDKL5O76039 MIR9-3-201ENST00000385084 90 ntBASIC2.07□□□□□ -2.08
CDKL5O76039 SNORD77.3-201ENST00000391113 65 ntBASIC2.07□□□□□ -2.08
CDKL5O76039 RNA5SP482-201ENST00000391269 118 ntBASIC2.07□□□□□ -2.08
CDKL5O76039 MIR548O-201ENST00000408583 114 ntBASIC2.07□□□□□ -2.08
CDKL5O76039 SNRPGP14-201ENST00000435400 219 ntBASIC2.07□□□□□ -2.08
CDKL5O76039 RNU5E-3P-201ENST00000515913 68 ntBASIC2.07□□□□□ -2.08
CDKL5O76039 RNU6-772P-201ENST00000516042 105 ntBASIC2.07□□□□□ -2.08
CDKL5O76039 SNORD45.4-201ENST00000516629 73 ntBASIC2.07□□□□□ -2.08
CDKL5O76039 MIR3122-201ENST00000577243 73 ntBASIC2.07□□□□□ -2.08
CDKL5O76039 MIR376A2-201ENST00000636782 80 ntBASIC2.07□□□□□ -2.08
CDKL5O76039 MTND5P32-201ENST00000560711 1802 ntBASIC2.07□□□□□ -2.08
CDKL5O76039 Y_RNA.242-201ENST00000364473 110 ntBASIC2.06□□□□□ -2.08
CDKL5O76039 snoU2-30.1-201ENST00000365012 70 ntBASIC2.06□□□□□ -2.08
CDKL5O76039 RNU6-215P-201ENST00000365169 102 ntBASIC2.06□□□□□ -2.08
CDKL5O76039 SNORD18B-201ENST00000365659 72 ntBASIC2.06□□□□□ -2.08
CDKL5O76039 RNU6-1292P-201ENST00000383856 107 ntBASIC2.06□□□□□ -2.08
CDKL5O76039 RNU6-442P-201ENST00000383968 104 ntBASIC2.06□□□□□ -2.08
CDKL5O76039 MIR504-201ENST00000385065 83 ntBASIC2.06□□□□□ -2.08
CDKL5O76039 AF228730.3-201ENST00000436691 102 ntBASIC2.06□□□□□ -2.08
CDKL5O76039 AL158147.1-201ENST00000443970 75 ntBASIC2.06□□□□□ -2.08
CDKL5O76039 Y_RNA.651-201ENST00000459380 103 ntBASIC2.06□□□□□ -2.08
CDKL5O76039 RNU7-25P-201ENST00000516544 62 ntBASIC2.06□□□□□ -2.08
CDKL5O76039 RNU6-1116P-201ENST00000517269 99 ntBASIC2.06□□□□□ -2.08
CDKL5O76039 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.06□□□□□ -2.08
CDKL5O76039 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.06□□□□□ -2.08
CDKL5O76039 AC006441.5-201ENST00000612680 209 ntBASIC2.06□□□□□ -2.08
CDKL5O76039 MIR7843-201ENST00000622274 79 ntBASIC2.06□□□□□ -2.08
CDKL5O76039 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CDKL5O76039 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CDKL5O76039 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CDKL5O76039 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CDKL5O76039 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CDKL5O76039 RNU6-268P-201ENST00000364174 107 ntBASIC2.05□□□□□ -2.08
CDKL5O76039 SNORA4.2-201ENST00000365313 147 ntBASIC2.05□□□□□ -2.08
CDKL5O76039 Y_RNA.563-201ENST00000384707 108 ntBASIC2.05□□□□□ -2.08
CDKL5O76039 RNA5SP465-201ENST00000391195 109 ntBASIC2.05□□□□□ -2.08
CDKL5O76039 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.05□□□□□ -2.08
CDKL5O76039 RPL23AP42-201ENST00000471152 471 ntBASIC2.05□□□□□ -2.08
CDKL5O76039 RPS29P11-201ENST00000496507 171 ntBASIC2.05□□□□□ -2.08
CDKL5O76039 RN7SKP179-201ENST00000516126 217 ntBASIC2.05□□□□□ -2.08
CDKL5O76039 RNA5SP236-201ENST00000516169 116 ntBASIC2.05□□□□□ -2.08
CDKL5O76039 RNU7-28P-201ENST00000516759 62 ntBASIC2.05□□□□□ -2.08
CDKL5O76039 Y_RNA.712-201ENST00000517011 92 ntBASIC2.05□□□□□ -2.08
CDKL5O76039 SNORA31.25-201ENST00000517242 134 ntBASIC2.05□□□□□ -2.08
CDKL5O76039 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CDKL5O76039 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CDKL5O76039 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CDKL5O76039 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CDKL5O76039 MIRLET7C-201ENST00000362160 84 ntBASIC2.04□□□□□ -2.08
CDKL5O76039 Y_RNA.81-201ENST00000362997 102 ntBASIC2.04□□□□□ -2.08
CDKL5O76039 SNORA63D-201ENST00000364359 132 ntBASIC2.04□□□□□ -2.08
CDKL5O76039 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CDKL5O76039 SNORA40.5-201ENST00000391061 128 ntBASIC2.04□□□□□ -2.08
CDKL5O76039 AC114811.1-201ENST00000507207 168 ntBASIC2.04□□□□□ -2.08
CDKL5O76039 RNU6-1149P-201ENST00000516810 97 ntBASIC2.04□□□□□ -2.08
CDKL5O76039 AL022345.2-201ENST00000606307 135 ntBASIC2.04□□□□□ -2.08
CDKL5O76039 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CDKL5O76039 SNORA48.1-201ENST00000390879 135 ntBASIC2.03□□□□□ -2.08
CDKL5O76039 SNORA40.18-201ENST00000391200 128 ntBASIC2.03□□□□□ -2.08
CDKL5O76039 RNA5SP501-201ENST00000410990 112 ntBASIC2.03□□□□□ -2.08
CDKL5O76039 Y_RNA.630-201ENST00000411370 108 ntBASIC2.03□□□□□ -2.08
CDKL5O76039 AC069257.2-201ENST00000441819 155 ntBASIC2.03□□□□□ -2.08
CDKL5O76039 SCARNA15-202ENST00000516881 127 ntBASIC2.03□□□□□ -2.08
CDKL5O76039 MIR3914-2-201ENST00000637339 95 ntBASIC2.03□□□□□ -2.08
CDKL5O76039 ICE2P2-201ENST00000483823 2787 ntBASIC2.03□□□□□ -2.09
CDKL5O76039 RNU6-1325P-201ENST00000364905 105 ntBASIC2.02□□□□□ -2.09
CDKL5O76039 Y_RNA.336-201ENST00000365307 109 ntBASIC2.02□□□□□ -2.09
CDKL5O76039 Y_RNA.547-201ENST00000384654 119 ntBASIC2.02□□□□□ -2.09
CDKL5O76039 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CDKL5O76039 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CDKL5O76039 U8.13-201ENST00000390842 128 ntBASIC2.02□□□□□ -2.09
CDKL5O76039 MIR1289-2-201ENST00000408360 111 ntBASIC2.02□□□□□ -2.09
CDKL5O76039 CALM2P4-201ENST00000430810 426 ntBASIC2.02□□□□□ -2.09
CDKL5O76039 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.02□□□□□ -2.09
CDKL5O76039 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.02□□□□□ -2.09
CDKL5O76039 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.02□□□□□ -2.09
CDKL5O76039 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.02□□□□□ -2.09
CDKL5O76039 RNA5SP437-201ENST00000517249 129 ntBASIC2.02□□□□□ -2.09
CDKL5O76039 AC133485.4-201ENST00000561835 220 ntBASIC2.02□□□□□ -2.09
CDKL5O76039 AC138907.4-201ENST00000570107 226 ntBASIC2.02□□□□□ -2.09
CDKL5O76039 MIR5197-201ENST00000583721 112 ntBASIC2.02□□□□□ -2.09
CDKL5O76039 AC108081.1-201ENST00000604358 221 ntBASIC2.02□□□□□ -2.09
CDKL5O76039 AC084768.2-201ENST00000622736 221 ntBASIC2.02□□□□□ -2.09
CDKL5O76039 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CDKL5O76039 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
CDKL5O76039 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CDKL5O76039 AC008555.8-201ENST00000623602 2168 ntBASIC2.02□□□□□ -2.09
CDKL5O76039 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CDKL5O76039 SNORD115-28-201ENST00000363931 81 ntBASIC2.01□□□□□ -2.09
CDKL5O76039 SNORD58C-201ENST00000365223 64 ntBASIC2.01□□□□□ -2.09
CDKL5O76039 RNU6-163P-201ENST00000384396 106 ntBASIC2.01□□□□□ -2.09
CDKL5O76039 Y_RNA.617-201ENST00000410920 90 ntBASIC2.01□□□□□ -2.09
CDKL5O76039 RNU6-781P-201ENST00000516377 101 ntBASIC2.01□□□□□ -2.09
CDKL5O76039 RNU6-1061P-201ENST00000516530 99 ntBASIC2.01□□□□□ -2.09
CDKL5O76039 SUB1P4-201ENST00000566062 339 ntBASIC2.01□□□□□ -2.09
CDKL5O76039 SNORA28-201ENST00000606769 126 ntBASIC2.01□□□□□ -2.09
CDKL5O76039 AC015726.2-201ENST00000620112 122 ntBASIC2.01□□□□□ -2.09
CDKL5O76039 RNU6-647P-201ENST00000364243 107 ntBASIC2□□□□□ -2.09
CDKL5O76039 SNORD48-201ENST00000364953 64 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms