Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 U8.17-201ENST00000391292 132 ntBASIC1.19□□□□□ -2.22
GPC4O75487 Y_RNA.622-201ENST00000411091 108 ntBASIC1.19□□□□□ -2.22
GPC4O75487 AC023449.1-201ENST00000454464 154 ntBASIC1.19□□□□□ -2.22
GPC4O75487 AC005840.1-201ENST00000498412 377 ntBASIC1.19□□□□□ -2.22
GPC4O75487 SCARNA8-201ENST00000515924 131 ntBASIC1.19□□□□□ -2.22
GPC4O75487 Y_RNA.666-201ENST00000516187 112 ntBASIC1.19□□□□□ -2.22
GPC4O75487 RNU6-453P-201ENST00000516819 85 ntBASIC1.19□□□□□ -2.22
GPC4O75487 SNORA70.22-201ENST00000517160 124 ntBASIC1.19□□□□□ -2.22
GPC4O75487 AC011921.3-201ENST00000605540 361 ntBASIC1.19□□□□□ -2.22
GPC4O75487 BX284668.6-201ENST00000606899 438 ntBASIC1.19□□□□□ -2.22
GPC4O75487 U4.1-201ENST00000620349 87 ntBASIC1.19□□□□□ -2.22
GPC4O75487 AL365265.1-201ENST00000621045 234 ntBASIC1.19□□□□□ -2.22
GPC4O75487 AC027335.2-201ENST00000624030 375 ntBASIC1.19□□□□□ -2.22
GPC4O75487 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
GPC4O75487 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
GPC4O75487 SNORA25.3-201ENST00000363205 127 ntBASIC1.18□□□□□ -2.22
GPC4O75487 RNY1P10-201ENST00000363268 113 ntBASIC1.18□□□□□ -2.22
GPC4O75487 Y_RNA.269-201ENST00000364685 89 ntBASIC1.18□□□□□ -2.22
GPC4O75487 RNU6-923P-201ENST00000364753 107 ntBASIC1.18□□□□□ -2.22
GPC4O75487 Y_RNA.308-201ENST00000365043 101 ntBASIC1.18□□□□□ -2.22
GPC4O75487 Y_RNA.562-201ENST00000384695 113 ntBASIC1.18□□□□□ -2.22
GPC4O75487 RNU6-493P-201ENST00000391321 108 ntBASIC1.18□□□□□ -2.22
GPC4O75487 RNU4-57P-201ENST00000515980 135 ntBASIC1.18□□□□□ -2.22
GPC4O75487 SNORA31.4-201ENST00000516049 129 ntBASIC1.18□□□□□ -2.22
GPC4O75487 Y_RNA.668-201ENST00000516233 93 ntBASIC1.18□□□□□ -2.22
GPC4O75487 RNU7-25P-201ENST00000516544 62 ntBASIC1.18□□□□□ -2.22
GPC4O75487 RNU7-43P-201ENST00000516554 64 ntBASIC1.18□□□□□ -2.22
GPC4O75487 AP003716.2-201ENST00000528260 108 ntBASIC1.18□□□□□ -2.22
GPC4O75487 MIR5688-201ENST00000580619 83 ntBASIC1.18□□□□□ -2.22
GPC4O75487 AC062037.2-201ENST00000610137 73 ntBASIC1.18□□□□□ -2.22
GPC4O75487 7SK.10-201ENST00000621414 298 ntBASIC1.18□□□□□ -2.22
GPC4O75487 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.18□□□□□ -2.22
GPC4O75487 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
GPC4O75487 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
GPC4O75487 RNU6-702P-201ENST00000364982 107 ntBASIC1.17□□□□□ -2.22
GPC4O75487 Y_RNA.547-201ENST00000384654 119 ntBASIC1.17□□□□□ -2.22
GPC4O75487 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
GPC4O75487 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.17□□□□□ -2.22
GPC4O75487 SNORD79.1-201ENST00000516069 84 ntBASIC1.17□□□□□ -2.22
GPC4O75487 RNA5SP404-201ENST00000517118 132 ntBASIC1.17□□□□□ -2.22
GPC4O75487 AC007751.1-201ENST00000529260 376 ntBASIC1.17□□□□□ -2.22
GPC4O75487 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.17□□□□□ -2.22
GPC4O75487 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
GPC4O75487 MIR337-201ENST00000362281 93 ntBASIC1.16□□□□□ -2.22
GPC4O75487 RNU6-653P-201ENST00000363074 106 ntBASIC1.16□□□□□ -2.22
GPC4O75487 SNORA25.8-201ENST00000364831 128 ntBASIC1.16□□□□□ -2.22
GPC4O75487 Y_RNA.292-201ENST00000364904 97 ntBASIC1.16□□□□□ -2.22
GPC4O75487 RNU6-392P-201ENST00000364926 101 ntBASIC1.16□□□□□ -2.22
GPC4O75487 Y_RNA.304-201ENST00000365011 112 ntBASIC1.16□□□□□ -2.22
GPC4O75487 Y_RNA.447-201ENST00000384184 113 ntBASIC1.16□□□□□ -2.22
GPC4O75487 RNU6-1228P-201ENST00000391014 107 ntBASIC1.16□□□□□ -2.22
GPC4O75487 SNORA75.2-201ENST00000391138 150 ntBASIC1.16□□□□□ -2.22
GPC4O75487 SNORA75.3-201ENST00000391231 150 ntBASIC1.16□□□□□ -2.22
GPC4O75487 MIR548O-201ENST00000408583 114 ntBASIC1.16□□□□□ -2.22
GPC4O75487 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.16□□□□□ -2.22
GPC4O75487 Y_RNA.4-201ENST00000362333 112 ntBASIC1.15□□□□□ -2.23
GPC4O75487 RNA5SP264-201ENST00000363115 107 ntBASIC1.15□□□□□ -2.23
GPC4O75487 Y_RNA.350-201ENST00000365409 98 ntBASIC1.15□□□□□ -2.23
GPC4O75487 RNU6-463P-201ENST00000384340 107 ntBASIC1.15□□□□□ -2.23
GPC4O75487 Y_RNA.539-201ENST00000384635 107 ntBASIC1.15□□□□□ -2.23
GPC4O75487 MIR222-201ENST00000384992 110 ntBASIC1.15□□□□□ -2.23
GPC4O75487 MIR1185-1-201ENST00000408598 86 ntBASIC1.15□□□□□ -2.23
GPC4O75487 COX6CP14-201ENST00000469580 174 ntBASIC1.15□□□□□ -2.23
GPC4O75487 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.15□□□□□ -2.23
GPC4O75487 AC008133.2-201ENST00000624540 351 ntBASIC1.15□□□□□ -2.23
GPC4O75487 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.14□□□□□ -2.23
GPC4O75487 Y_RNA.242-201ENST00000364473 110 ntBASIC1.14□□□□□ -2.23
GPC4O75487 MIR618-201ENST00000385287 98 ntBASIC1.14□□□□□ -2.23
GPC4O75487 MIR1285-1-201ENST00000408593 84 ntBASIC1.14□□□□□ -2.23
GPC4O75487 MRPL35P3-201ENST00000421557 364 ntBASIC1.14□□□□□ -2.23
GPC4O75487 AL591704.2-201ENST00000421658 181 ntBASIC1.14□□□□□ -2.23
GPC4O75487 AC002429.1-201ENST00000437672 148 ntBASIC1.14□□□□□ -2.23
GPC4O75487 SNRPGP8-201ENST00000454064 226 ntBASIC1.14□□□□□ -2.23
GPC4O75487 RNU6-561P-201ENST00000516222 102 ntBASIC1.14□□□□□ -2.23
GPC4O75487 MIR4781-201ENST00000585250 76 ntBASIC1.14□□□□□ -2.23
GPC4O75487 MIR6078-201ENST00000611069 100 ntBASIC1.14□□□□□ -2.23
GPC4O75487 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
GPC4O75487 Y_RNA.199-201ENST00000364014 102 ntBASIC1.13□□□□□ -2.23
GPC4O75487 SNORA20.1-201ENST00000364790 130 ntBASIC1.13□□□□□ -2.23
GPC4O75487 Y_RNA.452-201ENST00000384202 108 ntBASIC1.13□□□□□ -2.23
GPC4O75487 Y_RNA.494-201ENST00000384432 111 ntBASIC1.13□□□□□ -2.23
GPC4O75487 SNORA80D-201ENST00000384488 135 ntBASIC1.13□□□□□ -2.23
GPC4O75487 Y_RNA.556-201ENST00000384677 113 ntBASIC1.13□□□□□ -2.23
GPC4O75487 MIR548A2-201ENST00000384956 97 ntBASIC1.13□□□□□ -2.23
GPC4O75487 snosnR66.1-201ENST00000391095 99 ntBASIC1.13□□□□□ -2.23
GPC4O75487 RNU6-381P-201ENST00000391259 108 ntBASIC1.13□□□□□ -2.23
GPC4O75487 MIR548H3-201ENST00000408771 118 ntBASIC1.13□□□□□ -2.23
GPC4O75487 MIR1302-7-201ENST00000408841 72 ntBASIC1.13□□□□□ -2.23
GPC4O75487 RNU6-1270P-201ENST00000517128 108 ntBASIC1.13□□□□□ -2.23
GPC4O75487 RNU6-111P-201ENST00000517179 105 ntBASIC1.13□□□□□ -2.23
GPC4O75487 AL442067.1-201ENST00000613261 223 ntBASIC1.13□□□□□ -2.23
GPC4O75487 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
GPC4O75487 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
GPC4O75487 AC008163.1-202ENST00000636004 2889 ntBASIC1.12□□□□□ -2.23
GPC4O75487 Y_RNA.164-201ENST00000363709 102 ntBASIC1.12□□□□□ -2.23
GPC4O75487 Y_RNA.370-201ENST00000365589 108 ntBASIC1.12□□□□□ -2.23
GPC4O75487 RNU6-484P-201ENST00000384016 107 ntBASIC1.12□□□□□ -2.23
GPC4O75487 SNORD61-201ENST00000384252 73 ntBASIC1.12□□□□□ -2.23
GPC4O75487 AL606845.1-201ENST00000404881 255 ntBASIC1.12□□□□□ -2.23
GPC4O75487 RPS29P28-201ENST00000446439 141 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms