Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MIR549A-201ENST00000385268 96 ntBASIC-0.84□□□□□ -2.54
USH2AO75445 MIR1283-1-201ENST00000408494 87 ntBASIC-0.84□□□□□ -2.54
USH2AO75445 RNU7-67P-201ENST00000459003 62 ntBASIC-0.84□□□□□ -2.54
USH2AO75445 RNU6-1167P-201ENST00000363227 94 ntBASIC-0.84□□□□□ -2.54
USH2AO75445 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.84□□□□□ -2.54
USH2AO75445 ZNF321P-202ENST00000550843 495 ntBASIC-0.84□□□□□ -2.54
USH2AO75445 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-0.84□□□□□ -2.54
USH2AO75445 MIR6888-201ENST00000621977 67 ntBASIC-0.84□□□□□ -2.54
USH2AO75445 RNU6-223P-201ENST00000362830 107 ntBASIC-0.84□□□□□ -2.54
USH2AO75445 RNU6-214P-201ENST00000384130 107 ntBASIC-0.84□□□□□ -2.54
USH2AO75445 SNORD73A-201ENST00000386062 65 ntBASIC-0.84□□□□□ -2.54
USH2AO75445 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.84□□□□□ -2.54
USH2AO75445 SNRPGP14-201ENST00000435400 219 ntBASIC-0.84□□□□□ -2.54
USH2AO75445 U6.97-201ENST00000636904 101 ntBASIC-0.84□□□□□ -2.54
USH2AO75445 Y_RNA.33-201ENST00000362591 102 ntBASIC-0.85□□□□□ -2.54
USH2AO75445 RNU6-278P-201ENST00000390945 109 ntBASIC-0.85□□□□□ -2.54
USH2AO75445 AC145350.1-201ENST00000567426 208 ntBASIC-0.85□□□□□ -2.54
USH2AO75445 MIR4460-201ENST00000577862 86 ntBASIC-0.85□□□□□ -2.54
USH2AO75445 MIR4308-201ENST00000580634 81 ntBASIC-0.85□□□□□ -2.54
USH2AO75445 AC023158.2-201ENST00000614876 543 ntBASIC-0.85□□□□□ -2.54
USH2AO75445 AC022306.3-201ENST00000619930 550 ntBASIC-0.85□□□□□ -2.54
USH2AO75445 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 RNU6-926P-201ENST00000384075 107 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 RNU6-378P-201ENST00000384324 107 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 AC022447.4-201ENST00000504053 364 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 RNU7-99P-201ENST00000516271 62 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 RNU7-13P-201ENST00000516413 62 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 MTND3P13-201ENST00000574391 343 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 AC091178.2-201ENST00000584401 117 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 AC091948.2-201ENST00000636510 279 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 RNU6-834P-201ENST00000362367 110 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 SNORD114-4-201ENST00000363962 75 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 AL390729.2-201ENST00000416137 156 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 AL118558.2-201ENST00000556294 238 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 SNORD115-29-201ENST00000362834 82 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 SNORD115-11-201ENST00000363616 82 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 SNORD115-22-201ENST00000364456 82 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 SNORD115-43-201ENST00000365503 82 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 SNORD115-36-201ENST00000365629 82 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 RNU6-245P-201ENST00000384020 107 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 RNU6-166P-201ENST00000384371 107 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 SNORD38C-201ENST00000384381 69 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.85□□□□□ -2.55
USH2AO75445 RNU6-847P-201ENST00000411115 108 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 MIR4464-201ENST00000580818 92 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 MIR4491-201ENST00000581087 68 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 MIR5006-201ENST00000583027 110 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 MIR4438-201ENST00000585271 93 ntBASIC-0.85□□□□□ -2.55
USH2AO75445 RNU6-708P-201ENST00000384217 107 ntBASIC-0.86□□□□□ -2.55
USH2AO75445 RNU6-221P-201ENST00000459541 99 ntBASIC-0.86□□□□□ -2.55
USH2AO75445 RNU6-774P-201ENST00000363238 107 ntBASIC-0.86□□□□□ -2.55
USH2AO75445 SNORD113-3-201ENST00000364830 72 ntBASIC-0.86□□□□□ -2.55
USH2AO75445 RNU6-429P-201ENST00000384582 108 ntBASIC-0.86□□□□□ -2.55
USH2AO75445 RNU6-337P-201ENST00000391243 106 ntBASIC-0.86□□□□□ -2.55
USH2AO75445 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.86□□□□□ -2.55
USH2AO75445 MIR1305-201ENST00000408300 86 ntBASIC-0.86□□□□□ -2.55
USH2AO75445 AL358934.1-201ENST00000432346 324 ntBASIC-0.86□□□□□ -2.55
USH2AO75445 AP000542.1-201ENST00000448473 371 ntBASIC-0.86□□□□□ -2.55
USH2AO75445 YWHAEP2-201ENST00000580066 112 ntBASIC-0.86□□□□□ -2.55
USH2AO75445 AF250324.2-201ENST00000608299 610 ntBASIC-0.86□□□□□ -2.55
USH2AO75445 RNU6-647P-201ENST00000364243 107 ntBASIC-0.86□□□□□ -2.55
USH2AO75445 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.86□□□□□ -2.55
USH2AO75445 MTATP6P18-201ENST00000417994 673 ntBASIC-0.86□□□□□ -2.55
USH2AO75445 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC-0.86□□□□□ -2.55
USH2AO75445 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC-0.86□□□□□ -2.55
USH2AO75445 AC099654.9-201ENST00000637055 678 ntBASIC-0.86□□□□□ -2.55
USH2AO75445 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.86□□□□□ -2.55
USH2AO75445 MIR525-201ENST00000384978 85 ntBASIC-0.86□□□□□ -2.55
USH2AO75445 RPL30P16-201ENST00000419341 429 ntBASIC-0.86□□□□□ -2.55
USH2AO75445 MTCO3P42-201ENST00000509488 518 ntBASIC-0.86□□□□□ -2.55
USH2AO75445 MTCO3P39-201ENST00000514812 518 ntBASIC-0.86□□□□□ -2.55
USH2AO75445 RNU6-830P-201ENST00000516353 107 ntBASIC-0.86□□□□□ -2.55
USH2AO75445 MIR3646-201ENST00000578301 84 ntBASIC-0.86□□□□□ -2.55
USH2AO75445 Y_RNA.63-201ENST00000362841 102 ntBASIC-0.87□□□□□ -2.55
USH2AO75445 Y_RNA.110-201ENST00000363220 99 ntBASIC-0.87□□□□□ -2.55
USH2AO75445 RNU7-57P-201ENST00000459540 60 ntBASIC-0.87□□□□□ -2.55
USH2AO75445 AC104629.1-201ENST00000494226 508 ntBASIC-0.87□□□□□ -2.55
USH2AO75445 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.87□□□□□ -2.55
USH2AO75445 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.87□□□□□ -2.55
USH2AO75445 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.87□□□□□ -2.55
USH2AO75445 RNU6-571P-201ENST00000384128 107 ntBASIC-0.87□□□□□ -2.55
USH2AO75445 MIR1303-201ENST00000408625 86 ntBASIC-0.87□□□□□ -2.55
USH2AO75445 MTCO3P19-201ENST00000415864 321 ntBASIC-0.87□□□□□ -2.55
USH2AO75445 MTND1P35-201ENST00000526739 508 ntBASIC-0.87□□□□□ -2.55
USH2AO75445 MIRLET7A2-201ENST00000362105 72 ntBASIC-0.87□□□□□ -2.55
USH2AO75445 RNY1P1-201ENST00000364372 112 ntBASIC-0.87□□□□□ -2.55
USH2AO75445 RNU4-20P-201ENST00000365601 151 ntBASIC-0.87□□□□□ -2.55
USH2AO75445 MIR582-201ENST00000365731 98 ntBASIC-0.87□□□□□ -2.55
USH2AO75445 RNU6-630P-201ENST00000391258 106 ntBASIC-0.87□□□□□ -2.55
USH2AO75445 Z83846.1-201ENST00000446798 265 ntBASIC-0.87□□□□□ -2.55
USH2AO75445 RNU7-161P-201ENST00000517289 62 ntBASIC-0.87□□□□□ -2.55
USH2AO75445 AC009878.1-201ENST00000621819 340 ntBASIC-0.87□□□□□ -2.55
USH2AO75445 SNORD98-201ENST00000636377 67 ntBASIC-0.87□□□□□ -2.55
USH2AO75445 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.87□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 311.9 ms