Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC022018.1-201ENST00000430685 241 ntBASIC3.37□□□□□ -1.87
HOXA2O43364 AC104389.3-201ENST00000445629 235 ntBASIC3.37□□□□□ -1.87
HOXA2O43364 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXA2O43364 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXA2O43364 RNU6-1313P-201ENST00000362622 102 ntBASIC3.36□□□□□ -1.87
HOXA2O43364 SNORD115-35-201ENST00000365122 82 ntBASIC3.36□□□□□ -1.87
HOXA2O43364 RNU6-813P-201ENST00000384691 107 ntBASIC3.36□□□□□ -1.87
HOXA2O43364 RNU7-34P-201ENST00000459394 64 ntBASIC3.36□□□□□ -1.87
HOXA2O43364 UBE2DNL-203ENST00000474922 222 ntBASIC3.36□□□□□ -1.87
HOXA2O43364 NDUFB9P3-201ENST00000521269 501 ntBASIC3.36□□□□□ -1.87
HOXA2O43364 MIR4439-201ENST00000583746 80 ntBASIC3.36□□□□□ -1.87
HOXA2O43364 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXA2O43364 AP006437.1-201ENST00000641440 3685 ntBASIC3.35□□□□□ -1.87
HOXA2O43364 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.35□□□□□ -1.87
HOXA2O43364 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXA2O43364 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXA2O43364 MIR22-201ENST00000362190 85 ntBASIC3.35□□□□□ -1.87
HOXA2O43364 Y_RNA.190-201ENST00000363964 101 ntBASIC3.35□□□□□ -1.87
HOXA2O43364 Y_RNA.430-201ENST00000384081 110 ntBASIC3.35□□□□□ -1.87
HOXA2O43364 Y_RNA.467-201ENST00000384297 102 ntBASIC3.35□□□□□ -1.87
HOXA2O43364 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXA2O43364 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
HOXA2O43364 SNORA5B-201ENST00000363786 132 ntBASIC3.34□□□□□ -1.87
HOXA2O43364 SNORA54-201ENST00000384281 123 ntBASIC3.34□□□□□ -1.87
HOXA2O43364 SNORA26.6-201ENST00000391256 115 ntBASIC3.34□□□□□ -1.87
HOXA2O43364 RNA5SP395-201ENST00000516567 118 ntBASIC3.34□□□□□ -1.87
HOXA2O43364 MIR2276-201ENST00000516886 89 ntBASIC3.34□□□□□ -1.87
HOXA2O43364 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXA2O43364 MIR5588-201ENST00000581890 63 ntBASIC3.34□□□□□ -1.87
HOXA2O43364 MIR4791-201ENST00000607666 84 ntBASIC3.34□□□□□ -1.87
HOXA2O43364 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HOXA2O43364 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
HOXA2O43364 SNORD116-10-201ENST00000363791 102 ntBASIC3.33□□□□□ -1.88
HOXA2O43364 SNORA24-201ENST00000384096 131 ntBASIC3.33□□□□□ -1.88
HOXA2O43364 RNU2-40P-201ENST00000410833 196 ntBASIC3.33□□□□□ -1.88
HOXA2O43364 BX510359.4-201ENST00000423750 193 ntBASIC3.33□□□□□ -1.88
HOXA2O43364 MIR1270-201ENST00000459320 83 ntBASIC3.33□□□□□ -1.88
HOXA2O43364 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.33□□□□□ -1.88
HOXA2O43364 AC108729.3-201ENST00000513484 108 ntBASIC3.33□□□□□ -1.88
HOXA2O43364 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.33□□□□□ -1.88
HOXA2O43364 AC107016.2-201ENST00000547968 190 ntBASIC3.33□□□□□ -1.88
HOXA2O43364 MIR3126-201ENST00000577443 74 ntBASIC3.33□□□□□ -1.88
HOXA2O43364 MIR6717-201ENST00000622747 73 ntBASIC3.33□□□□□ -1.88
HOXA2O43364 RNU1-91P-201ENST00000364746 163 ntBASIC3.32□□□□□ -1.88
HOXA2O43364 RNU1-109P-201ENST00000383960 147 ntBASIC3.32□□□□□ -1.88
HOXA2O43364 SNORA32-201ENST00000384072 121 ntBASIC3.32□□□□□ -1.88
HOXA2O43364 RNU6-1031P-201ENST00000384773 107 ntBASIC3.32□□□□□ -1.88
HOXA2O43364 EEF1A1P41-201ENST00000414667 207 ntBASIC3.32□□□□□ -1.88
HOXA2O43364 RNU7-73P-201ENST00000458743 63 ntBASIC3.32□□□□□ -1.88
HOXA2O43364 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.32□□□□□ -1.88
HOXA2O43364 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.32□□□□□ -1.88
HOXA2O43364 SNORD3E-202ENST00000627253 216 ntBASIC3.32□□□□□ -1.88
HOXA2O43364 AC073476.4-201ENST00000628409 72 ntBASIC3.32□□□□□ -1.88
HOXA2O43364 RNU6-979P-201ENST00000383896 107 ntBASIC3.31□□□□□ -1.88
HOXA2O43364 RNU6-851P-201ENST00000384565 107 ntBASIC3.31□□□□□ -1.88
HOXA2O43364 AL020996.3-201ENST00000606617 222 ntBASIC3.31□□□□□ -1.88
HOXA2O43364 AC009487.2-201ENST00000420969 6821 ntBASIC3.31□□□□□ -1.88
HOXA2O43364 AP000648.3-201ENST00000623539 4507 ntBASIC3.31□□□□□ -1.88
HOXA2O43364 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXA2O43364 RNU6-219P-201ENST00000364728 107 ntBASIC3.3□□□□□ -1.88
HOXA2O43364 SNORD67-201ENST00000390833 111 ntBASIC3.3□□□□□ -1.88
HOXA2O43364 RPL23AP94-201ENST00000512518 302 ntBASIC3.3□□□□□ -1.88
HOXA2O43364 MIR4298-201ENST00000584380 73 ntBASIC3.3□□□□□ -1.88
HOXA2O43364 AL033523.1-201ENST00000605153 153 ntBASIC3.3□□□□□ -1.88
HOXA2O43364 AC022202.1-201ENST00000613515 211 ntBASIC3.3□□□□□ -1.88
HOXA2O43364 AC243994.1-201ENST00000618627 109 ntBASIC3.3□□□□□ -1.88
HOXA2O43364 MIR7153-201ENST00000637758 57 ntBASIC3.3□□□□□ -1.88
HOXA2O43364 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXA2O43364 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HOXA2O43364 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HOXA2O43364 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HOXA2O43364 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HOXA2O43364 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HOXA2O43364 MIR30E-201ENST00000362104 92 ntBASIC3.29□□□□□ -1.88
HOXA2O43364 SNORA38-201ENST00000363946 132 ntBASIC3.29□□□□□ -1.88
HOXA2O43364 RNU6-1067P-201ENST00000384752 107 ntBASIC3.29□□□□□ -1.88
HOXA2O43364 RNU6-1190P-201ENST00000410811 104 ntBASIC3.29□□□□□ -1.88
HOXA2O43364 MIR4425-201ENST00000580572 84 ntBASIC3.29□□□□□ -1.88
HOXA2O43364 MIR4668-201ENST00000582284 70 ntBASIC3.29□□□□□ -1.88
HOXA2O43364 ELOCP29-201ENST00000588193 334 ntBASIC3.29□□□□□ -1.88
HOXA2O43364 AC006023.1-201ENST00000603944 259 ntBASIC3.29□□□□□ -1.88
HOXA2O43364 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXA2O43364 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HOXA2O43364 Y_RNA.244-201ENST00000364484 109 ntBASIC3.28□□□□□ -1.88
HOXA2O43364 U8.9-201ENST00000365667 134 ntBASIC3.28□□□□□ -1.88
HOXA2O43364 MIR597-201ENST00000384968 97 ntBASIC3.28□□□□□ -1.88
HOXA2O43364 RNU11-3P-201ENST00000391111 133 ntBASIC3.28□□□□□ -1.88
HOXA2O43364 AL139132.1-201ENST00000431587 344 ntBASIC3.28□□□□□ -1.88
HOXA2O43364 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.28□□□□□ -1.88
HOXA2O43364 RNU7-171P-201ENST00000459581 62 ntBASIC3.28□□□□□ -1.88
HOXA2O43364 RNU6-267P-201ENST00000516714 103 ntBASIC3.28□□□□□ -1.88
HOXA2O43364 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.28□□□□□ -1.88
HOXA2O43364 RPL12P50-201ENST00000603116 116 ntBASIC3.28□□□□□ -1.88
HOXA2O43364 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
HOXA2O43364 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXA2O43364 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXA2O43364 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
HOXA2O43364 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
HOXA2O43364 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXA2O43364 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms