Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 Y_RNA.374-201ENST00000365606 101 ntBASIC1.15□□□□□ -2.23
CDX4O14627 MIR758-201ENST00000390227 88 ntBASIC1.15□□□□□ -2.23
CDX4O14627 RPL30P13-201ENST00000418873 348 ntBASIC1.15□□□□□ -2.23
CDX4O14627 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.15□□□□□ -2.23
CDX4O14627 SNX2P2-201ENST00000424553 323 ntBASIC1.15□□□□□ -2.23
CDX4O14627 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.15□□□□□ -2.23
CDX4O14627 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.15□□□□□ -2.23
CDX4O14627 AC245047.8-201ENST00000456455 284 ntBASIC1.15□□□□□ -2.23
CDX4O14627 RNU6-902P-201ENST00000517212 91 ntBASIC1.15□□□□□ -2.23
CDX4O14627 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CDX4O14627 RNU2-4P-201ENST00000606190 192 ntBASIC1.15□□□□□ -2.23
CDX4O14627 AL121890.5-201ENST00000620848 304 ntBASIC1.15□□□□□ -2.23
CDX4O14627 AC095038.3-201ENST00000634439 195 ntBASIC1.15□□□□□ -2.23
CDX4O14627 MIR302D-201ENST00000362275 68 ntBASIC1.14□□□□□ -2.23
CDX4O14627 SNORD68-201ENST00000363214 84 ntBASIC1.14□□□□□ -2.23
CDX4O14627 RNA5SP259-201ENST00000365541 109 ntBASIC1.14□□□□□ -2.23
CDX4O14627 RNU4-17P-201ENST00000365598 141 ntBASIC1.14□□□□□ -2.23
CDX4O14627 RNU6-918P-201ENST00000391219 106 ntBASIC1.14□□□□□ -2.23
CDX4O14627 RNU6-381P-201ENST00000391259 108 ntBASIC1.14□□□□□ -2.23
CDX4O14627 RNA5SP482-201ENST00000391269 118 ntBASIC1.14□□□□□ -2.23
CDX4O14627 Y_RNA.793-201ENST00000411222 111 ntBASIC1.14□□□□□ -2.23
CDX4O14627 SNRPGP10-201ENST00000432323 225 ntBASIC1.14□□□□□ -2.23
CDX4O14627 AC027119.1-201ENST00000440877 241 ntBASIC1.14□□□□□ -2.23
CDX4O14627 RPS23P4-201ENST00000487908 423 ntBASIC1.14□□□□□ -2.23
CDX4O14627 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.14□□□□□ -2.23
CDX4O14627 SNORA81.3-201ENST00000517283 198 ntBASIC1.14□□□□□ -2.23
CDX4O14627 AL049861.1-201ENST00000603130 150 ntBASIC1.14□□□□□ -2.23
CDX4O14627 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.14□□□□□ -2.23
CDX4O14627 MIR26B-201ENST00000362251 77 ntBASIC1.13□□□□□ -2.23
CDX4O14627 Y_RNA.29-201ENST00000362570 113 ntBASIC1.13□□□□□ -2.23
CDX4O14627 RNU6-1020P-201ENST00000363684 107 ntBASIC1.13□□□□□ -2.23
CDX4O14627 Y_RNA.587-201ENST00000391210 103 ntBASIC1.13□□□□□ -2.23
CDX4O14627 AL138752.1-201ENST00000452964 351 ntBASIC1.13□□□□□ -2.23
CDX4O14627 RPS29P23-201ENST00000458635 123 ntBASIC1.13□□□□□ -2.23
CDX4O14627 NDUFA4P2-201ENST00000489989 244 ntBASIC1.13□□□□□ -2.23
CDX4O14627 AC099513.1-201ENST00000490423 301 ntBASIC1.13□□□□□ -2.23
CDX4O14627 OR9P1P-201ENST00000496431 281 ntBASIC1.13□□□□□ -2.23
CDX4O14627 RNU6-1116P-201ENST00000517269 99 ntBASIC1.13□□□□□ -2.23
CDX4O14627 AC068338.1-201ENST00000565567 176 ntBASIC1.13□□□□□ -2.23
CDX4O14627 MIR5000-201ENST00000577717 103 ntBASIC1.13□□□□□ -2.23
CDX4O14627 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.13□□□□□ -2.23
CDX4O14627 MIR2681-201ENST00000581814 105 ntBASIC1.13□□□□□ -2.23
CDX4O14627 Z83818.1-201ENST00000603584 150 ntBASIC1.13□□□□□ -2.23
CDX4O14627 AC004792.1-201ENST00000614523 137 ntBASIC1.13□□□□□ -2.23
CDX4O14627 SNORD3E-202ENST00000627253 216 ntBASIC1.13□□□□□ -2.23
CDX4O14627 MIR373-201ENST00000362273 69 ntBASIC1.12□□□□□ -2.23
CDX4O14627 Y_RNA.7-201ENST00000362352 102 ntBASIC1.12□□□□□ -2.23
CDX4O14627 Y_RNA.785-201ENST00000384290 109 ntBASIC1.12□□□□□ -2.23
CDX4O14627 Y_RNA.571-201ENST00000384753 98 ntBASIC1.12□□□□□ -2.23
CDX4O14627 MIR522-201ENST00000385071 87 ntBASIC1.12□□□□□ -2.23
CDX4O14627 MT-TR-201ENST00000387439 65 ntBASIC1.12□□□□□ -2.23
CDX4O14627 RNA5SP496-201ENST00000391240 109 ntBASIC1.12□□□□□ -2.23
CDX4O14627 CALM2P4-201ENST00000430810 426 ntBASIC1.12□□□□□ -2.23
CDX4O14627 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.12□□□□□ -2.23
CDX4O14627 SNORD11-201ENST00000459124 84 ntBASIC1.12□□□□□ -2.23
CDX4O14627 RNU6-561P-201ENST00000516222 102 ntBASIC1.12□□□□□ -2.23
CDX4O14627 RNU6-1007P-201ENST00000516586 107 ntBASIC1.12□□□□□ -2.23
CDX4O14627 AP002392.1-201ENST00000537692 208 ntBASIC1.12□□□□□ -2.23
CDX4O14627 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.12□□□□□ -2.23
CDX4O14627 MIR5688-201ENST00000580619 83 ntBASIC1.12□□□□□ -2.23
CDX4O14627 AL021707.8-201ENST00000609428 183 ntBASIC1.12□□□□□ -2.23
CDX4O14627 JPX_2.1-201ENST00000614161 69 ntBASIC1.12□□□□□ -2.23
CDX4O14627 MIRLET7C-201ENST00000362160 84 ntBASIC1.11□□□□□ -2.23
CDX4O14627 Y_RNA.182-201ENST00000363880 111 ntBASIC1.11□□□□□ -2.23
CDX4O14627 SNORD50B-201ENST00000364995 70 ntBASIC1.11□□□□□ -2.23
CDX4O14627 RNU4-70P-201ENST00000384579 139 ntBASIC1.11□□□□□ -2.23
CDX4O14627 MIR660-201ENST00000385235 97 ntBASIC1.11□□□□□ -2.23
CDX4O14627 MIR616-201ENST00000385293 97 ntBASIC1.11□□□□□ -2.23
CDX4O14627 RNU6-131P-201ENST00000391144 107 ntBASIC1.11□□□□□ -2.23
CDX4O14627 U8.16-201ENST00000391279 133 ntBASIC1.11□□□□□ -2.23
CDX4O14627 AL606845.1-201ENST00000404881 255 ntBASIC1.11□□□□□ -2.23
CDX4O14627 Y_RNA.622-201ENST00000411091 108 ntBASIC1.11□□□□□ -2.23
CDX4O14627 PIGPP3-201ENST00000425307 415 ntBASIC1.11□□□□□ -2.23
CDX4O14627 RPS27P16-201ENST00000425758 201 ntBASIC1.11□□□□□ -2.23
CDX4O14627 RPL30P7-201ENST00000479312 323 ntBASIC1.11□□□□□ -2.23
CDX4O14627 RN7SKP164-201ENST00000516138 266 ntBASIC1.11□□□□□ -2.23
CDX4O14627 RNU6-1219P-201ENST00000516143 112 ntBASIC1.11□□□□□ -2.23
CDX4O14627 RNA5SP168-201ENST00000516642 112 ntBASIC1.11□□□□□ -2.23
CDX4O14627 RNU6-861P-201ENST00000516745 106 ntBASIC1.11□□□□□ -2.23
CDX4O14627 RNU6-1084P-201ENST00000362498 107 ntBASIC1.1□□□□□ -2.23
CDX4O14627 Y_RNA.233-201ENST00000364407 101 ntBASIC1.1□□□□□ -2.23
CDX4O14627 SNORD26-201ENST00000384147 75 ntBASIC1.1□□□□□ -2.23
CDX4O14627 SNORD72-201ENST00000390994 80 ntBASIC1.1□□□□□ -2.23
CDX4O14627 RNU2-64P-201ENST00000411315 191 ntBASIC1.1□□□□□ -2.23
CDX4O14627 POLR2J4-204ENST00000418424 324 ntBASIC1.1□□□□□ -2.23
CDX4O14627 SNRPGP8-201ENST00000454064 226 ntBASIC1.1□□□□□ -2.23
CDX4O14627 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.1□□□□□ -2.23
CDX4O14627 Y_RNA.797-201ENST00000515977 94 ntBASIC1.1□□□□□ -2.23
CDX4O14627 Y_RNA.700-201ENST00000516806 100 ntBASIC1.1□□□□□ -2.23
CDX4O14627 RNU6-182P-201ENST00000516970 105 ntBASIC1.1□□□□□ -2.23
CDX4O14627 SUMO2P16-201ENST00000519475 264 ntBASIC1.1□□□□□ -2.23
CDX4O14627 AL160236.1-201ENST00000556317 195 ntBASIC1.1□□□□□ -2.23
CDX4O14627 MIR4744-201ENST00000581563 82 ntBASIC1.1□□□□□ -2.23
CDX4O14627 RN7SL793P-201ENST00000583259 296 ntBASIC1.1□□□□□ -2.23
CDX4O14627 MIR4762-201ENST00000585261 75 ntBASIC1.1□□□□□ -2.23
CDX4O14627 uc_338.4-201ENST00000616635 176 ntBASIC1.1□□□□□ -2.23
CDX4O14627 U6.106-201ENST00000636360 105 ntBASIC1.1□□□□□ -2.23
CDX4O14627 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
CDX4O14627 Y_RNA.150-201ENST00000363562 102 ntBASIC1.09□□□□□ -2.23
CDX4O14627 RNU6-682P-201ENST00000363843 106 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms