Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 MIR4422-201ENST00000581938 83 ntBASIC1.68□□□□□ -2.14
MBD3L4A6NDZ8 MIR4448-201ENST00000584360 86 ntBASIC1.68□□□□□ -2.14
MBD3L4A6NDZ8 SNORD115-28-201ENST00000363931 81 ntBASIC1.67□□□□□ -2.14
MBD3L4A6NDZ8 RNU4-84P-201ENST00000364200 139 ntBASIC1.67□□□□□ -2.14
MBD3L4A6NDZ8 Y_RNA.226-201ENST00000364337 114 ntBASIC1.67□□□□□ -2.14
MBD3L4A6NDZ8 MIR653-201ENST00000385279 96 ntBASIC1.67□□□□□ -2.14
MBD3L4A6NDZ8 SNORD123-201ENST00000459473 70 ntBASIC1.67□□□□□ -2.14
MBD3L4A6NDZ8 SNRPGP19-201ENST00000603826 189 ntBASIC1.67□□□□□ -2.14
MBD3L4A6NDZ8 AC104465.1-201ENST00000611365 139 ntBASIC1.67□□□□□ -2.14
MBD3L4A6NDZ8 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
MBD3L4A6NDZ8 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
MBD3L4A6NDZ8 Y_RNA.272-201ENST00000364696 102 ntBASIC1.66□□□□□ -2.14
MBD3L4A6NDZ8 Y_RNA.337-201ENST00000365312 102 ntBASIC1.66□□□□□ -2.14
MBD3L4A6NDZ8 RNU6-209P-201ENST00000384118 107 ntBASIC1.66□□□□□ -2.14
MBD3L4A6NDZ8 SNORA17.3-201ENST00000391159 129 ntBASIC1.66□□□□□ -2.14
MBD3L4A6NDZ8 PCNPP3-201ENST00000393579 471 ntBASIC1.66□□□□□ -2.14
MBD3L4A6NDZ8 RNU6-830P-201ENST00000516353 107 ntBASIC1.66□□□□□ -2.14
MBD3L4A6NDZ8 SNORD111.1-201ENST00000516421 86 ntBASIC1.66□□□□□ -2.14
MBD3L4A6NDZ8 RNU7-181P-201ENST00000517234 74 ntBASIC1.66□□□□□ -2.14
MBD3L4A6NDZ8 AC007751.1-201ENST00000529260 376 ntBASIC1.66□□□□□ -2.14
MBD3L4A6NDZ8 MIR4781-201ENST00000585250 76 ntBASIC1.66□□□□□ -2.14
MBD3L4A6NDZ8 AL513534.2-201ENST00000603836 250 ntBASIC1.66□□□□□ -2.14
MBD3L4A6NDZ8 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
MBD3L4A6NDZ8 RNU6-978P-201ENST00000364371 103 ntBASIC1.65□□□□□ -2.15
MBD3L4A6NDZ8 SNORD41-201ENST00000386967 70 ntBASIC1.65□□□□□ -2.15
MBD3L4A6NDZ8 RNU6-239P-201ENST00000390990 99 ntBASIC1.65□□□□□ -2.15
MBD3L4A6NDZ8 U8.17-201ENST00000391292 132 ntBASIC1.65□□□□□ -2.15
MBD3L4A6NDZ8 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.65□□□□□ -2.15
MBD3L4A6NDZ8 AC027119.1-201ENST00000440877 241 ntBASIC1.65□□□□□ -2.15
MBD3L4A6NDZ8 RNU4-57P-201ENST00000515980 135 ntBASIC1.65□□□□□ -2.15
MBD3L4A6NDZ8 SNORA74.3-201ENST00000517108 154 ntBASIC1.65□□□□□ -2.15
MBD3L4A6NDZ8 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.65□□□□□ -2.15
MBD3L4A6NDZ8 MIR3129-201ENST00000581095 76 ntBASIC1.65□□□□□ -2.15
MBD3L4A6NDZ8 AL357312.1-201ENST00000603879 298 ntBASIC1.65□□□□□ -2.15
MBD3L4A6NDZ8 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
MBD3L4A6NDZ8 Y_RNA.8-201ENST00000362353 102 ntBASIC1.64□□□□□ -2.15
MBD3L4A6NDZ8 Y_RNA.37-201ENST00000362606 108 ntBASIC1.64□□□□□ -2.15
MBD3L4A6NDZ8 SNORA1-201ENST00000384107 130 ntBASIC1.64□□□□□ -2.15
MBD3L4A6NDZ8 Y_RNA.441-201ENST00000384123 112 ntBASIC1.64□□□□□ -2.15
MBD3L4A6NDZ8 MIR9-3-201ENST00000385084 90 ntBASIC1.64□□□□□ -2.15
MBD3L4A6NDZ8 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
MBD3L4A6NDZ8 AC003989.2-201ENST00000440224 169 ntBASIC1.64□□□□□ -2.15
MBD3L4A6NDZ8 RNU6-717P-201ENST00000459076 104 ntBASIC1.64□□□□□ -2.15
MBD3L4A6NDZ8 RNA5SP445-201ENST00000515889 115 ntBASIC1.64□□□□□ -2.15
MBD3L4A6NDZ8 snoU13.31-201ENST00000607291 104 ntBASIC1.64□□□□□ -2.15
MBD3L4A6NDZ8 AC134878.1-201ENST00000619901 243 ntBASIC1.64□□□□□ -2.15
MBD3L4A6NDZ8 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
MBD3L4A6NDZ8 Y_RNA.180-201ENST00000363867 113 ntBASIC1.63□□□□□ -2.15
MBD3L4A6NDZ8 SNORA25.7-201ENST00000364375 127 ntBASIC1.63□□□□□ -2.15
MBD3L4A6NDZ8 Y_RNA.241-201ENST00000364470 117 ntBASIC1.63□□□□□ -2.15
MBD3L4A6NDZ8 Y_RNA.393-201ENST00000383936 102 ntBASIC1.63□□□□□ -2.15
MBD3L4A6NDZ8 RNU6-768P-201ENST00000384683 107 ntBASIC1.63□□□□□ -2.15
MBD3L4A6NDZ8 RNU1-78P-201ENST00000391248 165 ntBASIC1.63□□□□□ -2.15
MBD3L4A6NDZ8 AF228730.3-201ENST00000436691 102 ntBASIC1.63□□□□□ -2.15
MBD3L4A6NDZ8 SNORA25.15-201ENST00000516487 89 ntBASIC1.63□□□□□ -2.15
MBD3L4A6NDZ8 RNU6-250P-201ENST00000516958 103 ntBASIC1.63□□□□□ -2.15
MBD3L4A6NDZ8 MIR3683-201ENST00000580847 82 ntBASIC1.63□□□□□ -2.15
MBD3L4A6NDZ8 GHRLOS.1-201ENST00000610995 70 ntBASIC1.63□□□□□ -2.15
MBD3L4A6NDZ8 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
MBD3L4A6NDZ8 MIR378A-201ENST00000362177 66 ntBASIC1.62□□□□□ -2.15
MBD3L4A6NDZ8 SNORA1.2-201ENST00000365189 134 ntBASIC1.62□□□□□ -2.15
MBD3L4A6NDZ8 RNA5SP190-201ENST00000365222 118 ntBASIC1.62□□□□□ -2.15
MBD3L4A6NDZ8 SNORD116-18-201ENST00000383961 92 ntBASIC1.62□□□□□ -2.15
MBD3L4A6NDZ8 Y_RNA.542-201ENST00000384641 111 ntBASIC1.62□□□□□ -2.15
MBD3L4A6NDZ8 MIR520C-201ENST00000385005 87 ntBASIC1.62□□□□□ -2.15
MBD3L4A6NDZ8 SNORD37.2-201ENST00000391075 66 ntBASIC1.62□□□□□ -2.15
MBD3L4A6NDZ8 MIR1287-201ENST00000408492 90 ntBASIC1.62□□□□□ -2.15
MBD3L4A6NDZ8 RNU6-1135P-201ENST00000411083 103 ntBASIC1.62□□□□□ -2.15
MBD3L4A6NDZ8 RPS27P16-201ENST00000425758 201 ntBASIC1.62□□□□□ -2.15
MBD3L4A6NDZ8 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.62□□□□□ -2.15
MBD3L4A6NDZ8 AC087499.4-201ENST00000448505 178 ntBASIC1.62□□□□□ -2.15
MBD3L4A6NDZ8 AC245517.4-201ENST00000448601 281 ntBASIC1.62□□□□□ -2.15
MBD3L4A6NDZ8 SNORD13-201ENST00000459299 104 ntBASIC1.62□□□□□ -2.15
MBD3L4A6NDZ8 RPL30P7-201ENST00000479312 323 ntBASIC1.62□□□□□ -2.15
MBD3L4A6NDZ8 RNU6-947P-201ENST00000516264 106 ntBASIC1.62□□□□□ -2.15
MBD3L4A6NDZ8 AP003484.1-201ENST00000530974 250 ntBASIC1.62□□□□□ -2.15
MBD3L4A6NDZ8 AL365205.2-201ENST00000594586 68 ntBASIC1.62□□□□□ -2.15
MBD3L4A6NDZ8 AC084768.2-201ENST00000622736 221 ntBASIC1.62□□□□□ -2.15
MBD3L4A6NDZ8 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.62□□□□□ -2.15
MBD3L4A6NDZ8 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
MBD3L4A6NDZ8 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
MBD3L4A6NDZ8 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
MBD3L4A6NDZ8 Y_RNA.370-201ENST00000365589 108 ntBASIC1.61□□□□□ -2.15
MBD3L4A6NDZ8 RNU6-804P-201ENST00000384286 107 ntBASIC1.61□□□□□ -2.15
MBD3L4A6NDZ8 SNORD28B-201ENST00000390993 75 ntBASIC1.61□□□□□ -2.15
MBD3L4A6NDZ8 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.61□□□□□ -2.15
MBD3L4A6NDZ8 RPS29P11-201ENST00000496507 171 ntBASIC1.61□□□□□ -2.15
MBD3L4A6NDZ8 SNORA18.4-201ENST00000516440 124 ntBASIC1.61□□□□□ -2.15
MBD3L4A6NDZ8 RNU7-43P-201ENST00000516554 64 ntBASIC1.61□□□□□ -2.15
MBD3L4A6NDZ8 SNORD36C-201ENST00000516733 66 ntBASIC1.61□□□□□ -2.15
MBD3L4A6NDZ8 AC090821.2-201ENST00000523552 176 ntBASIC1.61□□□□□ -2.15
MBD3L4A6NDZ8 MIR4255-201ENST00000579351 72 ntBASIC1.61□□□□□ -2.15
MBD3L4A6NDZ8 MIR4285-201ENST00000581001 85 ntBASIC1.61□□□□□ -2.15
MBD3L4A6NDZ8 MIR548AR-201ENST00000582191 57 ntBASIC1.61□□□□□ -2.15
MBD3L4A6NDZ8 DNAJC19P2-201ENST00000593340 302 ntBASIC1.61□□□□□ -2.15
MBD3L4A6NDZ8 AL121890.5-201ENST00000620848 304 ntBASIC1.61□□□□□ -2.15
MBD3L4A6NDZ8 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.61□□□□□ -2.15
MBD3L4A6NDZ8 MIR3658-201ENST00000636291 56 ntBASIC1.61□□□□□ -2.15
MBD3L4A6NDZ8 MIR6844-201ENST00000637122 62 ntBASIC1.61□□□□□ -2.15
MBD3L4A6NDZ8 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms