Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 AL022161.1-201ENST00000604390 213 ntBASIC-1.21□□□□□ -2.6
TRAV1-2A0A0B4J238 AP001506.1-201ENST00000615444 211 ntBASIC-1.21□□□□□ -2.6
TRAV1-2A0A0B4J238 AC004467.1-201ENST00000615678 330 ntBASIC-1.21□□□□□ -2.6
TRAV1-2A0A0B4J238 AL138960.2-201ENST00000625145 535 ntBASIC-1.21□□□□□ -2.6
TRAV1-2A0A0B4J238 Y_RNA.167-201ENST00000363735 109 ntBASIC-1.22□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU4-16P-201ENST00000364737 141 ntBASIC-1.22□□□□□ -2.6
TRAV1-2A0A0B4J238 Y_RNA.295-201ENST00000364918 102 ntBASIC-1.22□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU6-949P-201ENST00000384040 107 ntBASIC-1.22□□□□□ -2.6
TRAV1-2A0A0B4J238 SNORA27-201ENST00000384323 126 ntBASIC-1.22□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU6-900P-201ENST00000384498 102 ntBASIC-1.22□□□□□ -2.6
TRAV1-2A0A0B4J238 MIR181B2-201ENST00000385004 89 ntBASIC-1.22□□□□□ -2.6
TRAV1-2A0A0B4J238 MIR548O-201ENST00000408583 114 ntBASIC-1.22□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU4-55P-201ENST00000410731 137 ntBASIC-1.22□□□□□ -2.6
TRAV1-2A0A0B4J238 MTND3P21-201ENST00000433774 331 ntBASIC-1.22□□□□□ -2.6
TRAV1-2A0A0B4J238 RN7SKP19-201ENST00000516016 252 ntBASIC-1.22□□□□□ -2.6
TRAV1-2A0A0B4J238 SNORD38.3-201ENST00000516599 73 ntBASIC-1.22□□□□□ -2.6
TRAV1-2A0A0B4J238 RNU7-116P-201ENST00000516940 62 ntBASIC-1.22□□□□□ -2.6
TRAV1-2A0A0B4J238 MIR548AB-201ENST00000584917 84 ntBASIC-1.22□□□□□ -2.6
TRAV1-2A0A0B4J238 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.23□□□□□ -2.61
TRAV1-2A0A0B4J238 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.23□□□□□ -2.61
TRAV1-2A0A0B4J238 SNORA26.6-201ENST00000391256 115 ntBASIC-1.23□□□□□ -2.61
TRAV1-2A0A0B4J238 RNU2-72P-201ENST00000411175 163 ntBASIC-1.23□□□□□ -2.61
TRAV1-2A0A0B4J238 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.23□□□□□ -2.61
TRAV1-2A0A0B4J238 MIR3115-201ENST00000577915 68 ntBASIC-1.23□□□□□ -2.61
TRAV1-2A0A0B4J238 AL158050.2-201ENST00000605336 568 ntBASIC-1.23□□□□□ -2.61
TRAV1-2A0A0B4J238 RNU6-86P-201ENST00000606534 107 ntBASIC-1.23□□□□□ -2.61
TRAV1-2A0A0B4J238 AC008536.2-201ENST00000607284 349 ntBASIC-1.23□□□□□ -2.61
TRAV1-2A0A0B4J238 AC092954.2-201ENST00000609103 430 ntBASIC-1.23□□□□□ -2.61
TRAV1-2A0A0B4J238 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-1.23□□□□□ -2.61
TRAV1-2A0A0B4J238 RNU6-502P-201ENST00000362419 108 ntBASIC-1.24□□□□□ -2.61
TRAV1-2A0A0B4J238 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.24□□□□□ -2.61
TRAV1-2A0A0B4J238 SNORD113-6-201ENST00000363345 75 ntBASIC-1.24□□□□□ -2.61
TRAV1-2A0A0B4J238 RNU6-595P-201ENST00000363944 107 ntBASIC-1.24□□□□□ -2.61
TRAV1-2A0A0B4J238 RNU6-597P-201ENST00000365620 102 ntBASIC-1.24□□□□□ -2.61
TRAV1-2A0A0B4J238 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.24□□□□□ -2.61
TRAV1-2A0A0B4J238 SNORD77.3-201ENST00000391113 65 ntBASIC-1.24□□□□□ -2.61
TRAV1-2A0A0B4J238 AL603914.1-201ENST00000401964 204 ntBASIC-1.24□□□□□ -2.61
TRAV1-2A0A0B4J238 MIR548I3-201ENST00000408378 149 ntBASIC-1.24□□□□□ -2.61
TRAV1-2A0A0B4J238 MTND1P11-201ENST00000456661 876 ntBASIC-1.24□□□□□ -2.61
TRAV1-2A0A0B4J238 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.24□□□□□ -2.61
TRAV1-2A0A0B4J238 ACA59.1-201ENST00000515966 143 ntBASIC-1.24□□□□□ -2.61
TRAV1-2A0A0B4J238 AP003357.1-201ENST00000604497 148 ntBASIC-1.24□□□□□ -2.61
TRAV1-2A0A0B4J238 MIR6717-201ENST00000622747 73 ntBASIC-1.24□□□□□ -2.61
TRAV1-2A0A0B4J238 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.25□□□□□ -2.61
TRAV1-2A0A0B4J238 RNU4-32P-201ENST00000363404 141 ntBASIC-1.25□□□□□ -2.61
TRAV1-2A0A0B4J238 RNA5SP192-201ENST00000364404 120 ntBASIC-1.25□□□□□ -2.61
TRAV1-2A0A0B4J238 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.25□□□□□ -2.61
TRAV1-2A0A0B4J238 RNU6-38P-201ENST00000384085 107 ntBASIC-1.25□□□□□ -2.61
TRAV1-2A0A0B4J238 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.25□□□□□ -2.61
TRAV1-2A0A0B4J238 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.25□□□□□ -2.61
TRAV1-2A0A0B4J238 BX295541.1-201ENST00000417774 250 ntBASIC-1.25□□□□□ -2.61
TRAV1-2A0A0B4J238 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.25□□□□□ -2.61
TRAV1-2A0A0B4J238 RNU7-63P-201ENST00000459054 62 ntBASIC-1.25□□□□□ -2.61
TRAV1-2A0A0B4J238 Y_RNA.654-201ENST00000497848 106 ntBASIC-1.25□□□□□ -2.61
TRAV1-2A0A0B4J238 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.25□□□□□ -2.61
TRAV1-2A0A0B4J238 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.25□□□□□ -2.61
TRAV1-2A0A0B4J238 RNU6-531P-201ENST00000516694 104 ntBASIC-1.25□□□□□ -2.61
TRAV1-2A0A0B4J238 Y_RNA.706-201ENST00000516933 99 ntBASIC-1.25□□□□□ -2.61
TRAV1-2A0A0B4J238 AC245884.10-201ENST00000597355 337 ntBASIC-1.25□□□□□ -2.61
TRAV1-2A0A0B4J238 uc_338.10-201ENST00000621872 182 ntBASIC-1.25□□□□□ -2.61
TRAV1-2A0A0B4J238 RNU6-653P-201ENST00000363074 106 ntBASIC-1.26□□□□□ -2.61
TRAV1-2A0A0B4J238 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.26□□□□□ -2.61
TRAV1-2A0A0B4J238 Y_RNA.159-201ENST00000363674 87 ntBASIC-1.26□□□□□ -2.61
TRAV1-2A0A0B4J238 SNORD114-29-201ENST00000364819 70 ntBASIC-1.26□□□□□ -2.61
TRAV1-2A0A0B4J238 MIR539-201ENST00000365690 78 ntBASIC-1.26□□□□□ -2.61
TRAV1-2A0A0B4J238 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.26□□□□□ -2.61
TRAV1-2A0A0B4J238 Y_RNA.533-201ENST00000384596 114 ntBASIC-1.26□□□□□ -2.61
TRAV1-2A0A0B4J238 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.26□□□□□ -2.61
TRAV1-2A0A0B4J238 MTND2P9-201ENST00000422293 931 ntBASIC-1.26□□□□□ -2.61
TRAV1-2A0A0B4J238 AL033528.1-201ENST00000453780 140 ntBASIC-1.26□□□□□ -2.61
TRAV1-2A0A0B4J238 SNORD11-201ENST00000459124 84 ntBASIC-1.26□□□□□ -2.61
TRAV1-2A0A0B4J238 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.26□□□□□ -2.61
TRAV1-2A0A0B4J238 AC055872.1-201ENST00000570978 278 ntBASIC-1.26□□□□□ -2.61
TRAV1-2A0A0B4J238 AC018638.8-201ENST00000588755 281 ntBASIC-1.26□□□□□ -2.61
TRAV1-2A0A0B4J238 SNORD115-2-201ENST00000362842 82 ntBASIC-1.27□□□□□ -2.61
TRAV1-2A0A0B4J238 SNORD115-28-201ENST00000363931 81 ntBASIC-1.27□□□□□ -2.61
TRAV1-2A0A0B4J238 RNU4-50P-201ENST00000364361 141 ntBASIC-1.27□□□□□ -2.61
TRAV1-2A0A0B4J238 RNU6-318P-201ENST00000384283 103 ntBASIC-1.27□□□□□ -2.61
TRAV1-2A0A0B4J238 SNORA40.3-201ENST00000390964 122 ntBASIC-1.27□□□□□ -2.61
TRAV1-2A0A0B4J238 AC074085.1-201ENST00000413598 418 ntBASIC-1.27□□□□□ -2.61
TRAV1-2A0A0B4J238 MTATP6P13-201ENST00000438531 667 ntBASIC-1.27□□□□□ -2.61
TRAV1-2A0A0B4J238 RNU6-436P-201ENST00000516171 114 ntBASIC-1.27□□□□□ -2.61
TRAV1-2A0A0B4J238 MIR2681-201ENST00000581814 105 ntBASIC-1.27□□□□□ -2.61
TRAV1-2A0A0B4J238 AC060780.3-201ENST00000589464 80 ntBASIC-1.27□□□□□ -2.61
TRAV1-2A0A0B4J238 MTND5P18-201ENST00000445624 1801 ntBASIC-1.28□□□□□ -2.61
TRAV1-2A0A0B4J238 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.28□□□□□ -2.61
TRAV1-2A0A0B4J238 RNU4-58P-201ENST00000363192 141 ntBASIC-1.28□□□□□ -2.61
TRAV1-2A0A0B4J238 SNORD115-44-201ENST00000365391 82 ntBASIC-1.28□□□□□ -2.61
TRAV1-2A0A0B4J238 RNU6-901P-201ENST00000384593 106 ntBASIC-1.28□□□□□ -2.61
TRAV1-2A0A0B4J238 RNU6-95P-201ENST00000384697 107 ntBASIC-1.28□□□□□ -2.61
TRAV1-2A0A0B4J238 MIR517A-201ENST00000385001 87 ntBASIC-1.28□□□□□ -2.61
TRAV1-2A0A0B4J238 MT-TY-201ENST00000387409 66 ntBASIC-1.28□□□□□ -2.61
TRAV1-2A0A0B4J238 AC040926.1-201ENST00000530195 238 ntBASIC-1.28□□□□□ -2.61
TRAV1-2A0A0B4J238 DEFB131E-201ENST00000532329 154 ntBASIC-1.28□□□□□ -2.61
TRAV1-2A0A0B4J238 AC127455.1-201ENST00000565496 145 ntBASIC-1.28□□□□□ -2.61
TRAV1-2A0A0B4J238 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.28□□□□□ -2.61
TRAV1-2A0A0B4J238 MIR3179-1-201ENST00000578940 84 ntBASIC-1.28□□□□□ -2.61
TRAV1-2A0A0B4J238 MIR3179-2-201ENST00000579107 84 ntBASIC-1.28□□□□□ -2.61
TRAV1-2A0A0B4J238 MIR3179-3-201ENST00000579566 84 ntBASIC-1.28□□□□□ -2.61
TRAV1-2A0A0B4J238 AL157392.4-201ENST00000609756 345 ntBASIC-1.28□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms