Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.55□□□□□ -2.66
TRAV13-2A0A0B4J235 RNU6-30P-201ENST00000384561 107 ntBASIC-1.55□□□□□ -2.66
TRAV13-2A0A0B4J235 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-1.55□□□□□ -2.66
TRAV13-2A0A0B4J235 AC084290.1-201ENST00000434995 374 ntBASIC-1.55□□□□□ -2.66
TRAV13-2A0A0B4J235 SNORA40.9-201ENST00000515895 93 ntBASIC-1.55□□□□□ -2.66
TRAV13-2A0A0B4J235 RNU6-1038P-201ENST00000516516 104 ntBASIC-1.55□□□□□ -2.66
TRAV13-2A0A0B4J235 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.55□□□□□ -2.66
TRAV13-2A0A0B4J235 RNU6-531P-201ENST00000516694 104 ntBASIC-1.55□□□□□ -2.66
TRAV13-2A0A0B4J235 MIR3179-1-201ENST00000578940 84 ntBASIC-1.55□□□□□ -2.66
TRAV13-2A0A0B4J235 MIR3179-2-201ENST00000579107 84 ntBASIC-1.55□□□□□ -2.66
TRAV13-2A0A0B4J235 MIR3179-3-201ENST00000579566 84 ntBASIC-1.55□□□□□ -2.66
TRAV13-2A0A0B4J235 AC008536.2-201ENST00000607284 349 ntBASIC-1.55□□□□□ -2.66
TRAV13-2A0A0B4J235 MIR3179-4-201ENST00000617599 84 ntBASIC-1.55□□□□□ -2.66
TRAV13-2A0A0B4J235 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.56□□□□□ -2.66
TRAV13-2A0A0B4J235 RNU4-16P-201ENST00000364737 141 ntBASIC-1.56□□□□□ -2.66
TRAV13-2A0A0B4J235 RNU6-996P-201ENST00000365438 107 ntBASIC-1.56□□□□□ -2.66
TRAV13-2A0A0B4J235 RNU6-597P-201ENST00000365620 102 ntBASIC-1.56□□□□□ -2.66
TRAV13-2A0A0B4J235 MIR539-201ENST00000365690 78 ntBASIC-1.56□□□□□ -2.66
TRAV13-2A0A0B4J235 SNORD77.3-201ENST00000391113 65 ntBASIC-1.56□□□□□ -2.66
TRAV13-2A0A0B4J235 AL603914.1-201ENST00000401964 204 ntBASIC-1.56□□□□□ -2.66
TRAV13-2A0A0B4J235 Y_RNA.706-201ENST00000516933 99 ntBASIC-1.56□□□□□ -2.66
TRAV13-2A0A0B4J235 MIR4473-201ENST00000583731 91 ntBASIC-1.56□□□□□ -2.66
TRAV13-2A0A0B4J235 AL158211.2-201ENST00000607282 395 ntBASIC-1.56□□□□□ -2.66
TRAV13-2A0A0B4J235 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.57□□□□□ -2.66
TRAV13-2A0A0B4J235 SNORD115-44-201ENST00000365391 82 ntBASIC-1.57□□□□□ -2.66
TRAV13-2A0A0B4J235 RNU6-938P-201ENST00000411285 103 ntBASIC-1.57□□□□□ -2.66
TRAV13-2A0A0B4J235 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.57□□□□□ -2.66
TRAV13-2A0A0B4J235 ACA59.1-201ENST00000515966 143 ntBASIC-1.57□□□□□ -2.66
TRAV13-2A0A0B4J235 RN7SKP19-201ENST00000516016 252 ntBASIC-1.57□□□□□ -2.66
TRAV13-2A0A0B4J235 RNA5SP67-201ENST00000516422 131 ntBASIC-1.57□□□□□ -2.66
TRAV13-2A0A0B4J235 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.57□□□□□ -2.66
TRAV13-2A0A0B4J235 DEFB131E-201ENST00000532329 154 ntBASIC-1.57□□□□□ -2.66
TRAV13-2A0A0B4J235 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.57□□□□□ -2.66
TRAV13-2A0A0B4J235 AL118558.2-201ENST00000556294 238 ntBASIC-1.57□□□□□ -2.66
TRAV13-2A0A0B4J235 MIR3165-201ENST00000579874 75 ntBASIC-1.57□□□□□ -2.66
TRAV13-2A0A0B4J235 AC245884.10-201ENST00000597355 337 ntBASIC-1.57□□□□□ -2.66
TRAV13-2A0A0B4J235 AC004467.1-201ENST00000615678 330 ntBASIC-1.57□□□□□ -2.66
TRAV13-2A0A0B4J235 MIR6717-201ENST00000622747 73 ntBASIC-1.57□□□□□ -2.66
TRAV13-2A0A0B4J235 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.58□□□□□ -2.66
TRAV13-2A0A0B4J235 RNU6-1120P-201ENST00000362988 108 ntBASIC-1.58□□□□□ -2.66
TRAV13-2A0A0B4J235 RNU6-653P-201ENST00000363074 106 ntBASIC-1.58□□□□□ -2.66
TRAV13-2A0A0B4J235 Y_RNA.378-201ENST00000365652 113 ntBASIC-1.58□□□□□ -2.66
TRAV13-2A0A0B4J235 MIR518B-201ENST00000385127 83 ntBASIC-1.58□□□□□ -2.66
TRAV13-2A0A0B4J235 RNU6-1000P-201ENST00000391066 106 ntBASIC-1.58□□□□□ -2.66
TRAV13-2A0A0B4J235 SNORA26.6-201ENST00000391256 115 ntBASIC-1.58□□□□□ -2.66
TRAV13-2A0A0B4J235 AC074085.1-201ENST00000413598 418 ntBASIC-1.58□□□□□ -2.66
TRAV13-2A0A0B4J235 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.58□□□□□ -2.66
TRAV13-2A0A0B4J235 AC092954.2-201ENST00000609103 430 ntBASIC-1.58□□□□□ -2.66
TRAV13-2A0A0B4J235 DLEU2_5.1-201ENST00000615567 84 ntBASIC-1.58□□□□□ -2.66
TRAV13-2A0A0B4J235 RNU4-58P-201ENST00000363192 141 ntBASIC-1.59□□□□□ -2.66
TRAV13-2A0A0B4J235 RNA5SP192-201ENST00000364404 120 ntBASIC-1.59□□□□□ -2.66
TRAV13-2A0A0B4J235 Y_RNA.295-201ENST00000364918 102 ntBASIC-1.59□□□□□ -2.66
TRAV13-2A0A0B4J235 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.59□□□□□ -2.66
TRAV13-2A0A0B4J235 MT-TY-201ENST00000387409 66 ntBASIC-1.59□□□□□ -2.66
TRAV13-2A0A0B4J235 MTND3P21-201ENST00000433774 331 ntBASIC-1.59□□□□□ -2.66
TRAV13-2A0A0B4J235 MIR2681-201ENST00000581814 105 ntBASIC-1.59□□□□□ -2.66
TRAV13-2A0A0B4J235 MIR548AB-201ENST00000584917 84 ntBASIC-1.59□□□□□ -2.66
TRAV13-2A0A0B4J235 AP001506.1-201ENST00000615444 211 ntBASIC-1.59□□□□□ -2.66
TRAV13-2A0A0B4J235 AC091931.1-201ENST00000623488 728 ntBASIC-1.59□□□□□ -2.66
TRAV13-2A0A0B4J235 SNORD115-28-201ENST00000363931 81 ntBASIC-1.6□□□□□ -2.67
TRAV13-2A0A0B4J235 MIR626-201ENST00000385032 94 ntBASIC-1.6□□□□□ -2.67
TRAV13-2A0A0B4J235 RNU7-63P-201ENST00000459054 62 ntBASIC-1.6□□□□□ -2.67
TRAV13-2A0A0B4J235 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.6□□□□□ -2.67
TRAV13-2A0A0B4J235 AP003357.1-201ENST00000604497 148 ntBASIC-1.6□□□□□ -2.67
TRAV13-2A0A0B4J235 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-1.6□□□□□ -2.67
TRAV13-2A0A0B4J235 RNU6-879P-201ENST00000364328 108 ntBASIC-1.61□□□□□ -2.67
TRAV13-2A0A0B4J235 RNU1-141P-201ENST00000364623 158 ntBASIC-1.61□□□□□ -2.67
TRAV13-2A0A0B4J235 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.61□□□□□ -2.67
TRAV13-2A0A0B4J235 Y_RNA.533-201ENST00000384596 114 ntBASIC-1.61□□□□□ -2.67
TRAV13-2A0A0B4J235 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.61□□□□□ -2.67
TRAV13-2A0A0B4J235 MTATP6P13-201ENST00000438531 667 ntBASIC-1.61□□□□□ -2.67
TRAV13-2A0A0B4J235 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-1.61□□□□□ -2.67
TRAV13-2A0A0B4J235 AC140658.3-201ENST00000567603 271 ntBASIC-1.61□□□□□ -2.67
TRAV13-2A0A0B4J235 AL022161.1-201ENST00000604390 213 ntBASIC-1.61□□□□□ -2.67
TRAV13-2A0A0B4J235 AL138960.2-201ENST00000625145 535 ntBASIC-1.61□□□□□ -2.67
TRAV13-2A0A0B4J235 RNU6-595P-201ENST00000363944 107 ntBASIC-1.62□□□□□ -2.67
TRAV13-2A0A0B4J235 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.62□□□□□ -2.67
TRAV13-2A0A0B4J235 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.62□□□□□ -2.67
TRAV13-2A0A0B4J235 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.62□□□□□ -2.67
TRAV13-2A0A0B4J235 BX295541.1-201ENST00000417774 250 ntBASIC-1.62□□□□□ -2.67
TRAV13-2A0A0B4J235 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.62□□□□□ -2.67
TRAV13-2A0A0B4J235 FCF1P4-201ENST00000448326 183 ntBASIC-1.62□□□□□ -2.67
TRAV13-2A0A0B4J235 RNU7-96P-201ENST00000459535 64 ntBASIC-1.62□□□□□ -2.67
TRAV13-2A0A0B4J235 Y_RNA.654-201ENST00000497848 106 ntBASIC-1.62□□□□□ -2.67
TRAV13-2A0A0B4J235 RNY1P9-201ENST00000532431 109 ntBASIC-1.62□□□□□ -2.67
TRAV13-2A0A0B4J235 AP000676.1-201ENST00000533307 52 ntBASIC-1.62□□□□□ -2.67
TRAV13-2A0A0B4J235 AC127455.1-201ENST00000565496 145 ntBASIC-1.62□□□□□ -2.67
TRAV13-2A0A0B4J235 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.62□□□□□ -2.67
TRAV13-2A0A0B4J235 AC022441.3-201ENST00000605737 136 ntBASIC-1.62□□□□□ -2.67
TRAV13-2A0A0B4J235 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.63□□□□□ -2.67
TRAV13-2A0A0B4J235 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.63□□□□□ -2.67
TRAV13-2A0A0B4J235 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.63□□□□□ -2.67
TRAV13-2A0A0B4J235 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.63□□□□□ -2.67
TRAV13-2A0A0B4J235 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.63□□□□□ -2.67
TRAV13-2A0A0B4J235 MIR517A-201ENST00000385001 87 ntBASIC-1.63□□□□□ -2.67
TRAV13-2A0A0B4J235 MIR517B-201ENST00000385102 67 ntBASIC-1.63□□□□□ -2.67
TRAV13-2A0A0B4J235 MIR1278-201ENST00000408753 81 ntBASIC-1.63□□□□□ -2.67
TRAV13-2A0A0B4J235 RNA5SP261-201ENST00000410536 106 ntBASIC-1.63□□□□□ -2.67
TRAV13-2A0A0B4J235 RNU2-72P-201ENST00000411175 163 ntBASIC-1.63□□□□□ -2.67
TRAV13-2A0A0B4J235 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.63□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms