Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 Y_RNA.659-201ENST00000515994 113 ntBASIC2.45□□□□□ -2.02
U3KQE9 RNA5SP395-201ENST00000516567 118 ntBASIC2.45□□□□□ -2.02
U3KQE9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.45□□□□□ -2.02
U3KQE9 MIR3158-1-201ENST00000583596 81 ntBASIC2.45□□□□□ -2.02
U3KQE9 AL513534.2-201ENST00000603836 250 ntBASIC2.45□□□□□ -2.02
U3KQE9 AL513423.1-201ENST00000621695 132 ntBASIC2.45□□□□□ -2.02
U3KQE9 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.44□□□□□ -2.02
U3KQE9 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
U3KQE9 RNU6-228P-201ENST00000362700 106 ntBASIC2.44□□□□□ -2.02
U3KQE9 MIR449B-201ENST00000384995 97 ntBASIC2.44□□□□□ -2.02
U3KQE9 RNU2-40P-201ENST00000410833 196 ntBASIC2.44□□□□□ -2.02
U3KQE9 RN7SKP192-201ENST00000411291 327 ntBASIC2.44□□□□□ -2.02
U3KQE9 Z92545.1-201ENST00000411782 234 ntBASIC2.44□□□□□ -2.02
U3KQE9 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.44□□□□□ -2.02
U3KQE9 RNU6-1258P-201ENST00000516911 111 ntBASIC2.44□□□□□ -2.02
U3KQE9 MIR3126-201ENST00000577443 74 ntBASIC2.44□□□□□ -2.02
U3KQE9 MIR5094-201ENST00000578766 85 ntBASIC2.44□□□□□ -2.02
U3KQE9 AL020996.3-201ENST00000606617 222 ntBASIC2.44□□□□□ -2.02
U3KQE9 MIR6717-201ENST00000622747 73 ntBASIC2.44□□□□□ -2.02
U3KQE9 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
U3KQE9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
U3KQE9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
U3KQE9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
U3KQE9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
U3KQE9 AC096644.4-201ENST00000563417 2912 ntBASIC2.43□□□□□ -2.02
U3KQE9 SNORD115-35-201ENST00000365122 82 ntBASIC2.43□□□□□ -2.02
U3KQE9 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
U3KQE9 RNU1-109P-201ENST00000383960 147 ntBASIC2.43□□□□□ -2.02
U3KQE9 MIR520A-201ENST00000384862 85 ntBASIC2.43□□□□□ -2.02
U3KQE9 RNU6-521P-201ENST00000516663 105 ntBASIC2.43□□□□□ -2.02
U3KQE9 SNORA67.7-201ENST00000516664 135 ntBASIC2.43□□□□□ -2.02
U3KQE9 ICE2P2-201ENST00000483823 2787 ntBASIC2.43□□□□□ -2.02
U3KQE9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
U3KQE9 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
U3KQE9 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.42□□□□□ -2.02
U3KQE9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
U3KQE9 MIR148B-201ENST00000362252 99 ntBASIC2.42□□□□□ -2.02
U3KQE9 SNORD115-3-201ENST00000363100 82 ntBASIC2.42□□□□□ -2.02
U3KQE9 SNORA62.3-201ENST00000365110 153 ntBASIC2.42□□□□□ -2.02
U3KQE9 Y_RNA.470-201ENST00000384307 117 ntBASIC2.42□□□□□ -2.02
U3KQE9 Y_RNA.537-201ENST00000384626 109 ntBASIC2.42□□□□□ -2.02
U3KQE9 BTF3P4-201ENST00000418852 495 ntBASIC2.42□□□□□ -2.02
U3KQE9 RNU7-45P-201ENST00000459460 63 ntBASIC2.42□□□□□ -2.02
U3KQE9 AC108729.3-201ENST00000513484 108 ntBASIC2.42□□□□□ -2.02
U3KQE9 RNA5SP481-201ENST00000516814 122 ntBASIC2.42□□□□□ -2.02
U3KQE9 RNU6-958P-201ENST00000516995 106 ntBASIC2.42□□□□□ -2.02
U3KQE9 AC245166.1-201ENST00000521012 253 ntBASIC2.42□□□□□ -2.02
U3KQE9 AC006023.1-201ENST00000603944 259 ntBASIC2.42□□□□□ -2.02
U3KQE9 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.42□□□□□ -2.02
U3KQE9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.42□□□□□ -2.02
U3KQE9 AL512310.12-203ENST00000640543 90 ntBASIC2.42□□□□□ -2.02
U3KQE9 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
U3KQE9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
U3KQE9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.41□□□□□ -2.02
U3KQE9 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.41□□□□□ -2.02
U3KQE9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
U3KQE9 MIR183-201ENST00000384958 110 ntBASIC2.41□□□□□ -2.02
U3KQE9 RN7SKP220-201ENST00000410611 288 ntBASIC2.41□□□□□ -2.02
U3KQE9 RNU6-162P-201ENST00000516228 103 ntBASIC2.41□□□□□ -2.02
U3KQE9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.41□□□□□ -2.02
U3KQE9 AC103810.6-201ENST00000606708 136 ntBASIC2.41□□□□□ -2.02
U3KQE9 AC243994.1-201ENST00000618627 109 ntBASIC2.41□□□□□ -2.02
U3KQE9 U6.105-201ENST00000637379 88 ntBASIC2.41□□□□□ -2.02
U3KQE9 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.41□□□□□ -2.02
U3KQE9 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
U3KQE9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
U3KQE9 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.4□□□□□ -2.02
U3KQE9 Y_RNA.354-201ENST00000365448 111 ntBASIC2.4□□□□□ -2.03
U3KQE9 RNU6-979P-201ENST00000383896 107 ntBASIC2.4□□□□□ -2.03
U3KQE9 SNORA7.4-201ENST00000384249 137 ntBASIC2.4□□□□□ -2.03
U3KQE9 RNU6-813P-201ENST00000384691 107 ntBASIC2.4□□□□□ -2.03
U3KQE9 SNORA46-201ENST00000384762 135 ntBASIC2.4□□□□□ -2.03
U3KQE9 MIR516B2-201ENST00000385190 85 ntBASIC2.4□□□□□ -2.03
U3KQE9 RNU4-47P-201ENST00000410876 114 ntBASIC2.4□□□□□ -2.03
U3KQE9 BX510359.4-201ENST00000423750 193 ntBASIC2.4□□□□□ -2.03
U3KQE9 snoU13.16-201ENST00000459350 104 ntBASIC2.4□□□□□ -2.03
U3KQE9 RNU7-34P-201ENST00000459394 64 ntBASIC2.4□□□□□ -2.03
U3KQE9 RNU7-171P-201ENST00000459581 62 ntBASIC2.4□□□□□ -2.03
U3KQE9 AC091153.1-201ENST00000466297 402 ntBASIC2.4□□□□□ -2.03
U3KQE9 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.4□□□□□ -2.03
U3KQE9 MIR5588-201ENST00000581890 63 ntBASIC2.4□□□□□ -2.03
U3KQE9 MIR7975-201ENST00000619350 68 ntBASIC2.4□□□□□ -2.03
U3KQE9 MIR622-201ENST00000638396 96 ntBASIC2.4□□□□□ -2.03
U3KQE9 AC091304.10-201ENST00000641554 121 ntBASIC2.4□□□□□ -2.03
U3KQE9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
U3KQE9 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
U3KQE9 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.4□□□□□ -2.03
U3KQE9 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
U3KQE9 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.4□□□□□ -2.03
U3KQE9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.39□□□□□ -2.03
U3KQE9 RNU1-148P-201ENST00000384472 162 ntBASIC2.39□□□□□ -2.03
U3KQE9 MIR660-201ENST00000385235 97 ntBASIC2.39□□□□□ -2.03
U3KQE9 SNORA48.1-201ENST00000390879 135 ntBASIC2.39□□□□□ -2.03
U3KQE9 RNU6-279P-201ENST00000391297 101 ntBASIC2.39□□□□□ -2.03
U3KQE9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.39□□□□□ -2.03
U3KQE9 SNORA84-201ENST00000459229 133 ntBASIC2.39□□□□□ -2.03
U3KQE9 MIR1270-201ENST00000459320 83 ntBASIC2.39□□□□□ -2.03
U3KQE9 SNORD123-201ENST00000459473 70 ntBASIC2.39□□□□□ -2.03
U3KQE9 MIR4666B-201ENST00000578142 81 ntBASIC2.39□□□□□ -2.03
U3KQE9 MIR548Z-201ENST00000584743 97 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms