Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 RNU6-1219P-201ENST00000516143 112 ntBASIC1.94□□□□□ -2.1
PCDHGA9Q9Y5G4 RNU6-830P-201ENST00000516353 107 ntBASIC1.94□□□□□ -2.1
PCDHGA9Q9Y5G4 RNU6-861P-201ENST00000516745 106 ntBASIC1.94□□□□□ -2.1
PCDHGA9Q9Y5G4 MIR4778-201ENST00000577635 80 ntBASIC1.94□□□□□ -2.1
PCDHGA9Q9Y5G4 AC015688.6-201ENST00000577737 104 ntBASIC1.94□□□□□ -2.1
PCDHGA9Q9Y5G4 uc_338.20-201ENST00000621563 178 ntBASIC1.94□□□□□ -2.1
PCDHGA9Q9Y5G4 AC095038.3-201ENST00000634439 195 ntBASIC1.94□□□□□ -2.1
PCDHGA9Q9Y5G4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
PCDHGA9Q9Y5G4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
PCDHGA9Q9Y5G4 RNU6-643P-201ENST00000384018 107 ntBASIC1.93□□□□□ -2.1
PCDHGA9Q9Y5G4 AC107027.2-201ENST00000512197 115 ntBASIC1.93□□□□□ -2.1
PCDHGA9Q9Y5G4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.93□□□□□ -2.1
PCDHGA9Q9Y5G4 RNA5SP364-201ENST00000516938 78 ntBASIC1.93□□□□□ -2.1
PCDHGA9Q9Y5G4 AC022559.1-201ENST00000520905 205 ntBASIC1.93□□□□□ -2.1
PCDHGA9Q9Y5G4 RNU6-682P-201ENST00000363843 106 ntBASIC1.92□□□□□ -2.1
PCDHGA9Q9Y5G4 MIR583-201ENST00000384846 75 ntBASIC1.92□□□□□ -2.1
PCDHGA9Q9Y5G4 MIR934-201ENST00000401241 83 ntBASIC1.92□□□□□ -2.1
PCDHGA9Q9Y5G4 SNRPGP14-201ENST00000435400 219 ntBASIC1.92□□□□□ -2.1
PCDHGA9Q9Y5G4 HSPE1P24-201ENST00000450782 238 ntBASIC1.92□□□□□ -2.1
PCDHGA9Q9Y5G4 AC093850.1-201ENST00000454121 251 ntBASIC1.92□□□□□ -2.1
PCDHGA9Q9Y5G4 SNORD116-25-201ENST00000516517 92 ntBASIC1.92□□□□□ -2.1
PCDHGA9Q9Y5G4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.92□□□□□ -2.1
PCDHGA9Q9Y5G4 MIR378D2-201ENST00000580636 98 ntBASIC1.92□□□□□ -2.1
PCDHGA9Q9Y5G4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.92□□□□□ -2.1
PCDHGA9Q9Y5G4 AL513534.2-201ENST00000603836 250 ntBASIC1.92□□□□□ -2.1
PCDHGA9Q9Y5G4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.92□□□□□ -2.1
PCDHGA9Q9Y5G4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PCDHGA9Q9Y5G4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PCDHGA9Q9Y5G4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.91□□□□□ -2.1
PCDHGA9Q9Y5G4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PCDHGA9Q9Y5G4 AL021397.1-201ENST00000451806 248 ntBASIC1.91□□□□□ -2.1
PCDHGA9Q9Y5G4 AC090049.2-201ENST00000550377 109 ntBASIC1.91□□□□□ -2.1
PCDHGA9Q9Y5G4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.91□□□□□ -2.1
PCDHGA9Q9Y5G4 MIR4422-201ENST00000581938 83 ntBASIC1.91□□□□□ -2.1
PCDHGA9Q9Y5G4 AP000942.3-201ENST00000603702 160 ntBASIC1.91□□□□□ -2.1
PCDHGA9Q9Y5G4 MIR6845-201ENST00000613182 61 ntBASIC1.91□□□□□ -2.1
PCDHGA9Q9Y5G4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
PCDHGA9Q9Y5G4 Y_RNA.337-201ENST00000365312 102 ntBASIC1.9□□□□□ -2.11
PCDHGA9Q9Y5G4 Y_RNA.441-201ENST00000384123 112 ntBASIC1.9□□□□□ -2.11
PCDHGA9Q9Y5G4 MIR653-201ENST00000385279 96 ntBASIC1.9□□□□□ -2.11
PCDHGA9Q9Y5G4 RNU6-1135P-201ENST00000411083 103 ntBASIC1.9□□□□□ -2.11
PCDHGA9Q9Y5G4 AC025033.1-201ENST00000463883 194 ntBASIC1.9□□□□□ -2.11
PCDHGA9Q9Y5G4 AC079140.2-201ENST00000506193 142 ntBASIC1.9□□□□□ -2.11
PCDHGA9Q9Y5G4 RNU6-561P-201ENST00000516222 102 ntBASIC1.9□□□□□ -2.11
PCDHGA9Q9Y5G4 MIR8063-201ENST00000621930 81 ntBASIC1.9□□□□□ -2.11
PCDHGA9Q9Y5G4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
PCDHGA9Q9Y5G4 RNU6-888P-201ENST00000363010 101 ntBASIC1.89□□□□□ -2.11
PCDHGA9Q9Y5G4 RNU6-457P-201ENST00000363999 107 ntBASIC1.89□□□□□ -2.11
PCDHGA9Q9Y5G4 RNU6-886P-201ENST00000384319 105 ntBASIC1.89□□□□□ -2.11
PCDHGA9Q9Y5G4 RNU6-239P-201ENST00000390990 99 ntBASIC1.89□□□□□ -2.11
PCDHGA9Q9Y5G4 RNU1-78P-201ENST00000391248 165 ntBASIC1.89□□□□□ -2.11
PCDHGA9Q9Y5G4 AL451046.2-201ENST00000403074 277 ntBASIC1.89□□□□□ -2.11
PCDHGA9Q9Y5G4 RNU6-693P-201ENST00000516134 107 ntBASIC1.89□□□□□ -2.11
PCDHGA9Q9Y5G4 AC090142.3-201ENST00000519012 385 ntBASIC1.89□□□□□ -2.11
PCDHGA9Q9Y5G4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
PCDHGA9Q9Y5G4 RNA5SP160-201ENST00000364866 120 ntBASIC1.88□□□□□ -2.11
PCDHGA9Q9Y5G4 SNORA1.2-201ENST00000365189 134 ntBASIC1.88□□□□□ -2.11
PCDHGA9Q9Y5G4 RNU6-1067P-201ENST00000384752 107 ntBASIC1.88□□□□□ -2.11
PCDHGA9Q9Y5G4 MIR548O-201ENST00000408583 114 ntBASIC1.88□□□□□ -2.11
PCDHGA9Q9Y5G4 AC006461.1-201ENST00000412637 326 ntBASIC1.88□□□□□ -2.11
PCDHGA9Q9Y5G4 SNX2P2-201ENST00000424553 323 ntBASIC1.88□□□□□ -2.11
PCDHGA9Q9Y5G4 AC087499.4-201ENST00000448505 178 ntBASIC1.88□□□□□ -2.11
PCDHGA9Q9Y5G4 Y_RNA.666-201ENST00000516187 112 ntBASIC1.88□□□□□ -2.11
PCDHGA9Q9Y5G4 RNU1-40P-201ENST00000516816 164 ntBASIC1.88□□□□□ -2.11
PCDHGA9Q9Y5G4 RNU1-97P-201ENST00000516872 164 ntBASIC1.88□□□□□ -2.11
PCDHGA9Q9Y5G4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.88□□□□□ -2.11
PCDHGA9Q9Y5G4 AL357312.1-201ENST00000603879 298 ntBASIC1.88□□□□□ -2.11
PCDHGA9Q9Y5G4 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.88□□□□□ -2.11
PCDHGA9Q9Y5G4 AL442644.1-201ENST00000454390 3105 ntBASIC1.88□□□□□ -2.11
PCDHGA9Q9Y5G4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
PCDHGA9Q9Y5G4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.87□□□□□ -2.11
PCDHGA9Q9Y5G4 Y_RNA.180-201ENST00000363867 113 ntBASIC1.87□□□□□ -2.11
PCDHGA9Q9Y5G4 RNU4-84P-201ENST00000364200 139 ntBASIC1.87□□□□□ -2.11
PCDHGA9Q9Y5G4 SNORD1A-201ENST00000364968 72 ntBASIC1.87□□□□□ -2.11
PCDHGA9Q9Y5G4 Y_RNA.521-201ENST00000384560 114 ntBASIC1.87□□□□□ -2.11
PCDHGA9Q9Y5G4 Y_RNA.542-201ENST00000384641 111 ntBASIC1.87□□□□□ -2.11
PCDHGA9Q9Y5G4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.87□□□□□ -2.11
PCDHGA9Q9Y5G4 SEPT7P4-201ENST00000437076 306 ntBASIC1.87□□□□□ -2.11
PCDHGA9Q9Y5G4 AC245517.4-201ENST00000448601 281 ntBASIC1.87□□□□□ -2.11
PCDHGA9Q9Y5G4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.87□□□□□ -2.11
PCDHGA9Q9Y5G4 FAM106DP-201ENST00000586416 501 ntBASIC1.87□□□□□ -2.11
PCDHGA9Q9Y5G4 AC134878.1-201ENST00000619901 243 ntBASIC1.87□□□□□ -2.11
PCDHGA9Q9Y5G4 AC106754.2-201ENST00000623006 233 ntBASIC1.87□□□□□ -2.11
PCDHGA9Q9Y5G4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.87□□□□□ -2.11
PCDHGA9Q9Y5G4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
PCDHGA9Q9Y5G4 MIR302D-201ENST00000362275 68 ntBASIC1.86□□□□□ -2.11
PCDHGA9Q9Y5G4 Y_RNA.66-201ENST00000362862 102 ntBASIC1.86□□□□□ -2.11
PCDHGA9Q9Y5G4 RNU1-17P-201ENST00000363022 152 ntBASIC1.86□□□□□ -2.11
PCDHGA9Q9Y5G4 Y_RNA.91-201ENST00000363042 107 ntBASIC1.86□□□□□ -2.11
PCDHGA9Q9Y5G4 SNORA25.7-201ENST00000364375 127 ntBASIC1.86□□□□□ -2.11
PCDHGA9Q9Y5G4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.86□□□□□ -2.11
PCDHGA9Q9Y5G4 AC015726.2-201ENST00000620112 122 ntBASIC1.86□□□□□ -2.11
PCDHGA9Q9Y5G4 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
PCDHGA9Q9Y5G4 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
PCDHGA9Q9Y5G4 Y_RNA.140-201ENST00000363474 103 ntBASIC1.85□□□□□ -2.11
PCDHGA9Q9Y5G4 SNORD115-28-201ENST00000363931 81 ntBASIC1.85□□□□□ -2.11
PCDHGA9Q9Y5G4 Y_RNA.338-201ENST00000365320 114 ntBASIC1.85□□□□□ -2.11
PCDHGA9Q9Y5G4 Y_RNA.410-201ENST00000383992 113 ntBASIC1.85□□□□□ -2.11
PCDHGA9Q9Y5G4 SNORD61-201ENST00000384252 73 ntBASIC1.85□□□□□ -2.11
PCDHGA9Q9Y5G4 Y_RNA.547-201ENST00000384654 119 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms