Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
PCDHGC4Q9Y5F7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.04□□□□□ -1.92
PCDHGC4Q9Y5F7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
PCDHGC4Q9Y5F7 Y_RNA.95-201ENST00000363079 95 ntBASIC3.04□□□□□ -1.92
PCDHGC4Q9Y5F7 SNORD115-35-201ENST00000365122 82 ntBASIC3.04□□□□□ -1.92
PCDHGC4Q9Y5F7 RNU6-979P-201ENST00000383896 107 ntBASIC3.04□□□□□ -1.92
PCDHGC4Q9Y5F7 RNU6-616P-201ENST00000384353 107 ntBASIC3.04□□□□□ -1.92
PCDHGC4Q9Y5F7 RNU6-424P-201ENST00000384367 105 ntBASIC3.04□□□□□ -1.92
PCDHGC4Q9Y5F7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDHGC4Q9Y5F7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDHGC4Q9Y5F7 AL135938.1-201ENST00000443141 297 ntBASIC3.04□□□□□ -1.92
PCDHGC4Q9Y5F7 RPS29P12-201ENST00000460178 152 ntBASIC3.04□□□□□ -1.92
PCDHGC4Q9Y5F7 AC006483.1-201ENST00000487308 313 ntBASIC3.04□□□□□ -1.92
PCDHGC4Q9Y5F7 Y_RNA.659-201ENST00000515994 113 ntBASIC3.04□□□□□ -1.92
PCDHGC4Q9Y5F7 RNU6-1258P-201ENST00000516911 111 ntBASIC3.04□□□□□ -1.92
PCDHGC4Q9Y5F7 MIR5588-201ENST00000581890 63 ntBASIC3.04□□□□□ -1.92
PCDHGC4Q9Y5F7 MIR8054-201ENST00000620877 86 ntBASIC3.04□□□□□ -1.92
PCDHGC4Q9Y5F7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHGC4Q9Y5F7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
PCDHGC4Q9Y5F7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHGC4Q9Y5F7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHGC4Q9Y5F7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.03□□□□□ -1.92
PCDHGC4Q9Y5F7 MIRLET7C-201ENST00000362160 84 ntBASIC3.03□□□□□ -1.92
PCDHGC4Q9Y5F7 RNU6-1125P-201ENST00000363601 107 ntBASIC3.03□□□□□ -1.92
PCDHGC4Q9Y5F7 Y_RNA.467-201ENST00000384297 102 ntBASIC3.03□□□□□ -1.92
PCDHGC4Q9Y5F7 MIR1267-201ENST00000408723 78 ntBASIC3.03□□□□□ -1.92
PCDHGC4Q9Y5F7 AC015922.2-201ENST00000435593 184 ntBASIC3.03□□□□□ -1.92
PCDHGC4Q9Y5F7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.03□□□□□ -1.92
PCDHGC4Q9Y5F7 RPS27P29-201ENST00000463110 252 ntBASIC3.03□□□□□ -1.92
PCDHGC4Q9Y5F7 Y_RNA.705-201ENST00000516862 110 ntBASIC3.03□□□□□ -1.92
PCDHGC4Q9Y5F7 IGLV3-17-201ENST00000519099 244 ntBASIC3.03□□□□□ -1.92
PCDHGC4Q9Y5F7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.03□□□□□ -1.92
PCDHGC4Q9Y5F7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
PCDHGC4Q9Y5F7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHGC4Q9Y5F7 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.02□□□□□ -1.93
PCDHGC4Q9Y5F7 MIR148B-201ENST00000362252 99 ntBASIC3.02□□□□□ -1.93
PCDHGC4Q9Y5F7 Y_RNA.377-201ENST00000365644 108 ntBASIC3.02□□□□□ -1.93
PCDHGC4Q9Y5F7 RNU6-1201P-201ENST00000384227 107 ntBASIC3.02□□□□□ -1.93
PCDHGC4Q9Y5F7 SNORA46-201ENST00000384762 135 ntBASIC3.02□□□□□ -1.93
PCDHGC4Q9Y5F7 SNORD77B-201ENST00000391112 67 ntBASIC3.02□□□□□ -1.93
PCDHGC4Q9Y5F7 RNA5SP274-201ENST00000410484 108 ntBASIC3.02□□□□□ -1.93
PCDHGC4Q9Y5F7 RNA5SP293-201ENST00000410527 113 ntBASIC3.02□□□□□ -1.93
PCDHGC4Q9Y5F7 UBL5P3-201ENST00000475112 231 ntBASIC3.02□□□□□ -1.93
PCDHGC4Q9Y5F7 EIF4BP1-201ENST00000554881 351 ntBASIC3.02□□□□□ -1.93
PCDHGC4Q9Y5F7 MIR3169-201ENST00000578032 83 ntBASIC3.02□□□□□ -1.93
PCDHGC4Q9Y5F7 AC027279.3-201ENST00000625055 122 ntBASIC3.02□□□□□ -1.93
PCDHGC4Q9Y5F7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.02□□□□□ -1.93
PCDHGC4Q9Y5F7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PCDHGC4Q9Y5F7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
PCDHGC4Q9Y5F7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
PCDHGC4Q9Y5F7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PCDHGC4Q9Y5F7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.01□□□□□ -1.93
PCDHGC4Q9Y5F7 Y_RNA.313-201ENST00000365095 103 ntBASIC3.01□□□□□ -1.93
PCDHGC4Q9Y5F7 SNORD21-201ENST00000383953 95 ntBASIC3.01□□□□□ -1.93
PCDHGC4Q9Y5F7 Y_RNA.510-201ENST00000384511 114 ntBASIC3.01□□□□□ -1.93
PCDHGC4Q9Y5F7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
PCDHGC4Q9Y5F7 SNORA26.7-201ENST00000391288 122 ntBASIC3.01□□□□□ -1.93
PCDHGC4Q9Y5F7 RNU6-279P-201ENST00000391297 101 ntBASIC3.01□□□□□ -1.93
PCDHGC4Q9Y5F7 RNU6-887P-201ENST00000410660 100 ntBASIC3.01□□□□□ -1.93
PCDHGC4Q9Y5F7 AC022018.1-201ENST00000430685 241 ntBASIC3.01□□□□□ -1.93
PCDHGC4Q9Y5F7 S100A11P2-201ENST00000467589 312 ntBASIC3.01□□□□□ -1.93
PCDHGC4Q9Y5F7 RNU6-521P-201ENST00000516663 105 ntBASIC3.01□□□□□ -1.93
PCDHGC4Q9Y5F7 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.01□□□□□ -1.93
PCDHGC4Q9Y5F7 AC103810.6-201ENST00000606708 136 ntBASIC3.01□□□□□ -1.93
PCDHGC4Q9Y5F7 SNORA28-201ENST00000606769 126 ntBASIC3.01□□□□□ -1.93
PCDHGC4Q9Y5F7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
PCDHGC4Q9Y5F7 SNORD115-2-201ENST00000362842 82 ntBASIC3□□□□□ -1.93
PCDHGC4Q9Y5F7 RNU6-23P-201ENST00000363283 107 ntBASIC3□□□□□ -1.93
PCDHGC4Q9Y5F7 RNU6-219P-201ENST00000364728 107 ntBASIC3□□□□□ -1.93
PCDHGC4Q9Y5F7 SNORD115-20-201ENST00000365099 82 ntBASIC3□□□□□ -1.93
PCDHGC4Q9Y5F7 Y_RNA.437-201ENST00000384113 113 ntBASIC3□□□□□ -1.93
PCDHGC4Q9Y5F7 Y_RNA.470-201ENST00000384307 117 ntBASIC3□□□□□ -1.93
PCDHGC4Q9Y5F7 RNU6-1319P-201ENST00000390855 104 ntBASIC3□□□□□ -1.93
PCDHGC4Q9Y5F7 RNU6-747P-201ENST00000390928 104 ntBASIC3□□□□□ -1.93
PCDHGC4Q9Y5F7 RNU6-241P-201ENST00000391148 104 ntBASIC3□□□□□ -1.93
PCDHGC4Q9Y5F7 RNU6-177P-201ENST00000411257 104 ntBASIC3□□□□□ -1.93
PCDHGC4Q9Y5F7 RN7SL633P-201ENST00000488974 297 ntBASIC3□□□□□ -1.93
PCDHGC4Q9Y5F7 RNU6-1018P-201ENST00000516577 106 ntBASIC3□□□□□ -1.93
PCDHGC4Q9Y5F7 RNA5SP33-201ENST00000516687 98 ntBASIC3□□□□□ -1.93
PCDHGC4Q9Y5F7 AC245166.1-201ENST00000521012 253 ntBASIC3□□□□□ -1.93
PCDHGC4Q9Y5F7 MIR4666B-201ENST00000578142 81 ntBASIC3□□□□□ -1.93
PCDHGC4Q9Y5F7 MIR548AE2-201ENST00000583456 67 ntBASIC3□□□□□ -1.93
PCDHGC4Q9Y5F7 AL512310.12-203ENST00000640543 90 ntBASIC3□□□□□ -1.93
PCDHGC4Q9Y5F7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
PCDHGC4Q9Y5F7 AC009487.2-201ENST00000420969 6821 ntBASIC3□□□□□ -1.93
PCDHGC4Q9Y5F7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
PCDHGC4Q9Y5F7 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.99□□□□□ -1.93
PCDHGC4Q9Y5F7 SNORA11.4-201ENST00000408823 129 ntBASIC2.99□□□□□ -1.93
PCDHGC4Q9Y5F7 RN7SKP192-201ENST00000411291 327 ntBASIC2.99□□□□□ -1.93
PCDHGC4Q9Y5F7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.99□□□□□ -1.93
PCDHGC4Q9Y5F7 AC069257.2-201ENST00000441819 155 ntBASIC2.99□□□□□ -1.93
PCDHGC4Q9Y5F7 UQCRHP3-201ENST00000451503 251 ntBASIC2.99□□□□□ -1.93
PCDHGC4Q9Y5F7 MIR1270-201ENST00000459320 83 ntBASIC2.99□□□□□ -1.93
PCDHGC4Q9Y5F7 RNU7-171P-201ENST00000459581 62 ntBASIC2.99□□□□□ -1.93
PCDHGC4Q9Y5F7 RNA5SP380-201ENST00000517190 98 ntBASIC2.99□□□□□ -1.93
PCDHGC4Q9Y5F7 MIR3152-201ENST00000579801 74 ntBASIC2.99□□□□□ -1.93
PCDHGC4Q9Y5F7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.99□□□□□ -1.93
PCDHGC4Q9Y5F7 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PCDHGC4Q9Y5F7 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms