Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 Y_RNA.164-201ENST00000363709 102 ntBASIC2.08□□□□□ -2.08
PCDHB1Q9Y5F3 RNU6-978P-201ENST00000364371 103 ntBASIC2.08□□□□□ -2.08
PCDHB1Q9Y5F3 RNU6-1138P-201ENST00000365359 106 ntBASIC2.08□□□□□ -2.08
PCDHB1Q9Y5F3 SNORA40-201ENST00000388090 126 ntBASIC2.08□□□□□ -2.08
PCDHB1Q9Y5F3 U8.13-201ENST00000390842 128 ntBASIC2.08□□□□□ -2.08
PCDHB1Q9Y5F3 SNORA12.1-201ENST00000390873 148 ntBASIC2.08□□□□□ -2.08
PCDHB1Q9Y5F3 SNORA79-201ENST00000408376 140 ntBASIC2.08□□□□□ -2.08
PCDHB1Q9Y5F3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.08□□□□□ -2.08
PCDHB1Q9Y5F3 RNU6-1211P-201ENST00000459179 105 ntBASIC2.08□□□□□ -2.08
PCDHB1Q9Y5F3 RNU7-34P-201ENST00000459394 64 ntBASIC2.08□□□□□ -2.08
PCDHB1Q9Y5F3 SNORD77.4-201ENST00000516158 81 ntBASIC2.08□□□□□ -2.08
PCDHB1Q9Y5F3 RNU6-1299P-201ENST00000516316 100 ntBASIC2.08□□□□□ -2.08
PCDHB1Q9Y5F3 RNU6-197P-201ENST00000516680 100 ntBASIC2.08□□□□□ -2.08
PCDHB1Q9Y5F3 MIR378D2-201ENST00000580636 98 ntBASIC2.08□□□□□ -2.08
PCDHB1Q9Y5F3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.08□□□□□ -2.08
PCDHB1Q9Y5F3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
PCDHB1Q9Y5F3 Y_RNA.251-201ENST00000364551 99 ntBASIC2.07□□□□□ -2.08
PCDHB1Q9Y5F3 Y_RNA.294-201ENST00000364916 102 ntBASIC2.07□□□□□ -2.08
PCDHB1Q9Y5F3 snoU2-30.1-201ENST00000365012 70 ntBASIC2.07□□□□□ -2.08
PCDHB1Q9Y5F3 Y_RNA.432-201ENST00000384087 111 ntBASIC2.07□□□□□ -2.08
PCDHB1Q9Y5F3 Y_RNA.525-201ENST00000384570 113 ntBASIC2.07□□□□□ -2.08
PCDHB1Q9Y5F3 SNORA26-201ENST00000391286 122 ntBASIC2.07□□□□□ -2.08
PCDHB1Q9Y5F3 RNU2-51P-201ENST00000410708 197 ntBASIC2.07□□□□□ -2.08
PCDHB1Q9Y5F3 AC025033.1-201ENST00000463883 194 ntBASIC2.07□□□□□ -2.08
PCDHB1Q9Y5F3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.07□□□□□ -2.08
PCDHB1Q9Y5F3 RNU7-149P-201ENST00000516739 59 ntBASIC2.07□□□□□ -2.08
PCDHB1Q9Y5F3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.07□□□□□ -2.08
PCDHB1Q9Y5F3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.07□□□□□ -2.08
PCDHB1Q9Y5F3 Pinc.1-201ENST00000616452 154 ntBASIC2.07□□□□□ -2.08
PCDHB1Q9Y5F3 AC027279.3-201ENST00000625055 122 ntBASIC2.07□□□□□ -2.08
PCDHB1Q9Y5F3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
PCDHB1Q9Y5F3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
PCDHB1Q9Y5F3 Y_RNA.4-201ENST00000362333 112 ntBASIC2.06□□□□□ -2.08
PCDHB1Q9Y5F3 RNU6-1290P-201ENST00000362957 109 ntBASIC2.06□□□□□ -2.08
PCDHB1Q9Y5F3 Y_RNA.634-201ENST00000364811 113 ntBASIC2.06□□□□□ -2.08
PCDHB1Q9Y5F3 Y_RNA.486-201ENST00000384398 107 ntBASIC2.06□□□□□ -2.08
PCDHB1Q9Y5F3 MIR17-201ENST00000385012 84 ntBASIC2.06□□□□□ -2.08
PCDHB1Q9Y5F3 MIR802-201ENST00000390235 94 ntBASIC2.06□□□□□ -2.08
PCDHB1Q9Y5F3 RNU6-1154P-201ENST00000391001 104 ntBASIC2.06□□□□□ -2.08
PCDHB1Q9Y5F3 AC090255.1-201ENST00000495779 349 ntBASIC2.06□□□□□ -2.08
PCDHB1Q9Y5F3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.06□□□□□ -2.08
PCDHB1Q9Y5F3 RNA5SP153-201ENST00000516498 76 ntBASIC2.06□□□□□ -2.08
PCDHB1Q9Y5F3 RNU1-40P-201ENST00000516816 164 ntBASIC2.06□□□□□ -2.08
PCDHB1Q9Y5F3 RNU1-97P-201ENST00000516872 164 ntBASIC2.06□□□□□ -2.08
PCDHB1Q9Y5F3 AL160236.1-201ENST00000556317 195 ntBASIC2.06□□□□□ -2.08
PCDHB1Q9Y5F3 MIR548AI-201ENST00000579940 88 ntBASIC2.06□□□□□ -2.08
PCDHB1Q9Y5F3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.06□□□□□ -2.08
PCDHB1Q9Y5F3 AC008507.4-201ENST00000585464 127 ntBASIC2.06□□□□□ -2.08
PCDHB1Q9Y5F3 MIR6845-201ENST00000613182 61 ntBASIC2.06□□□□□ -2.08
PCDHB1Q9Y5F3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.06□□□□□ -2.08
PCDHB1Q9Y5F3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.06□□□□□ -2.08
PCDHB1Q9Y5F3 AC092881.1-201ENST00000638218 2733 ntBASIC2.05□□□□□ -2.08
PCDHB1Q9Y5F3 RNU1-17P-201ENST00000363022 152 ntBASIC2.05□□□□□ -2.08
PCDHB1Q9Y5F3 RNU6-508P-201ENST00000363231 103 ntBASIC2.05□□□□□ -2.08
PCDHB1Q9Y5F3 SNORD72-201ENST00000390994 80 ntBASIC2.05□□□□□ -2.08
PCDHB1Q9Y5F3 RNU6-735P-201ENST00000410612 107 ntBASIC2.05□□□□□ -2.08
PCDHB1Q9Y5F3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.05□□□□□ -2.08
PCDHB1Q9Y5F3 HMGN2P32-201ENST00000444648 269 ntBASIC2.05□□□□□ -2.08
PCDHB1Q9Y5F3 AL021397.1-201ENST00000451806 248 ntBASIC2.05□□□□□ -2.08
PCDHB1Q9Y5F3 CYCTP-201ENST00000504253 315 ntBASIC2.05□□□□□ -2.08
PCDHB1Q9Y5F3 AP000942.3-201ENST00000603702 160 ntBASIC2.05□□□□□ -2.08
PCDHB1Q9Y5F3 Y_RNA.71-201ENST00000362892 104 ntBASIC2.04□□□□□ -2.08
PCDHB1Q9Y5F3 SNORD14E-201ENST00000364009 85 ntBASIC2.04□□□□□ -2.08
PCDHB1Q9Y5F3 RNU6-915P-201ENST00000364943 103 ntBASIC2.04□□□□□ -2.08
PCDHB1Q9Y5F3 Y_RNA.336-201ENST00000365307 109 ntBASIC2.04□□□□□ -2.08
PCDHB1Q9Y5F3 RNU6-163P-201ENST00000384396 106 ntBASIC2.04□□□□□ -2.08
PCDHB1Q9Y5F3 RNU6-1081P-201ENST00000384537 107 ntBASIC2.04□□□□□ -2.08
PCDHB1Q9Y5F3 RNU6-1168P-201ENST00000390831 104 ntBASIC2.04□□□□□ -2.08
PCDHB1Q9Y5F3 SNORA75.5-201ENST00000391291 81 ntBASIC2.04□□□□□ -2.08
PCDHB1Q9Y5F3 SNORA26.9-201ENST00000391322 122 ntBASIC2.04□□□□□ -2.08
PCDHB1Q9Y5F3 RNU2-70P-201ENST00000410718 179 ntBASIC2.04□□□□□ -2.08
PCDHB1Q9Y5F3 AL445646.1-201ENST00000431784 216 ntBASIC2.04□□□□□ -2.08
PCDHB1Q9Y5F3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.04□□□□□ -2.08
PCDHB1Q9Y5F3 PGBD4P5-201ENST00000445958 426 ntBASIC2.04□□□□□ -2.08
PCDHB1Q9Y5F3 MRPS17P9-201ENST00000511924 393 ntBASIC2.04□□□□□ -2.08
PCDHB1Q9Y5F3 RNU6-479P-201ENST00000516348 105 ntBASIC2.04□□□□□ -2.08
PCDHB1Q9Y5F3 Y_RNA.686-201ENST00000516548 134 ntBASIC2.04□□□□□ -2.08
PCDHB1Q9Y5F3 SNORD45.4-201ENST00000516629 73 ntBASIC2.04□□□□□ -2.08
PCDHB1Q9Y5F3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.04□□□□□ -2.08
PCDHB1Q9Y5F3 MIR3646-201ENST00000578301 84 ntBASIC2.04□□□□□ -2.08
PCDHB1Q9Y5F3 AL513423.1-201ENST00000621695 132 ntBASIC2.04□□□□□ -2.08
PCDHB1Q9Y5F3 ICE2P2-201ENST00000483823 2787 ntBASIC2.04□□□□□ -2.08
PCDHB1Q9Y5F3 SNORD50B-201ENST00000364995 70 ntBASIC2.03□□□□□ -2.08
PCDHB1Q9Y5F3 RNU6-442P-201ENST00000383968 104 ntBASIC2.03□□□□□ -2.08
PCDHB1Q9Y5F3 AL356379.1-201ENST00000414105 126 ntBASIC2.03□□□□□ -2.08
PCDHB1Q9Y5F3 RNU6-313P-201ENST00000516317 112 ntBASIC2.03□□□□□ -2.08
PCDHB1Q9Y5F3 RNA5SP168-201ENST00000516642 112 ntBASIC2.03□□□□□ -2.08
PCDHB1Q9Y5F3 MIR4713-201ENST00000582691 75 ntBASIC2.03□□□□□ -2.08
PCDHB1Q9Y5F3 AC021506.2-201ENST00000612354 169 ntBASIC2.03□□□□□ -2.08
PCDHB1Q9Y5F3 AL359851.1-201ENST00000569460 4997 ntBASIC2.03□□□□□ -2.08
PCDHB1Q9Y5F3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
PCDHB1Q9Y5F3 MIRLET7C-201ENST00000362160 84 ntBASIC2.02□□□□□ -2.09
PCDHB1Q9Y5F3 RNU6-414P-201ENST00000363705 104 ntBASIC2.02□□□□□ -2.09
PCDHB1Q9Y5F3 RNU6-597P-201ENST00000365620 102 ntBASIC2.02□□□□□ -2.09
PCDHB1Q9Y5F3 RNU6-424P-201ENST00000384367 105 ntBASIC2.02□□□□□ -2.09
PCDHB1Q9Y5F3 CALM2P4-201ENST00000430810 426 ntBASIC2.02□□□□□ -2.09
PCDHB1Q9Y5F3 RNU6-717P-201ENST00000459076 104 ntBASIC2.02□□□□□ -2.09
PCDHB1Q9Y5F3 RNU6-1333P-201ENST00000516162 93 ntBASIC2.02□□□□□ -2.09
PCDHB1Q9Y5F3 RNU6-62P-201ENST00000516526 102 ntBASIC2.02□□□□□ -2.09
PCDHB1Q9Y5F3 MIR514B-201ENST00000516774 80 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 179.7 ms