Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
R3HCC1Q9Y3T6 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
R3HCC1Q9Y3T6 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
R3HCC1Q9Y3T6 RNU6-588P-201ENST00000410281 105 ntBASIC2.34□□□□□ -2.03
R3HCC1Q9Y3T6 AC004965.1-201ENST00000413033 213 ntBASIC2.34□□□□□ -2.03
R3HCC1Q9Y3T6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.34□□□□□ -2.03
R3HCC1Q9Y3T6 AC015922.2-201ENST00000435593 184 ntBASIC2.34□□□□□ -2.03
R3HCC1Q9Y3T6 JTBP1-201ENST00000441314 247 ntBASIC2.34□□□□□ -2.03
R3HCC1Q9Y3T6 RPS27P21-201ENST00000486977 252 ntBASIC2.34□□□□□ -2.03
R3HCC1Q9Y3T6 AC090142.3-201ENST00000519012 385 ntBASIC2.34□□□□□ -2.03
R3HCC1Q9Y3T6 SUMO2P16-201ENST00000519475 264 ntBASIC2.34□□□□□ -2.03
R3HCC1Q9Y3T6 AC103810.8-201ENST00000607347 118 ntBASIC2.34□□□□□ -2.03
R3HCC1Q9Y3T6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.33□□□□□ -2.04
R3HCC1Q9Y3T6 RNU6-661P-201ENST00000362409 107 ntBASIC2.33□□□□□ -2.04
R3HCC1Q9Y3T6 RNU6-414P-201ENST00000363705 104 ntBASIC2.33□□□□□ -2.04
R3HCC1Q9Y3T6 RNU6-457P-201ENST00000363999 107 ntBASIC2.33□□□□□ -2.04
R3HCC1Q9Y3T6 Y_RNA.215-201ENST00000364204 112 ntBASIC2.33□□□□□ -2.04
R3HCC1Q9Y3T6 Y_RNA.547-201ENST00000384654 119 ntBASIC2.33□□□□□ -2.04
R3HCC1Q9Y3T6 MIR526A1-201ENST00000384897 85 ntBASIC2.33□□□□□ -2.04
R3HCC1Q9Y3T6 MIR3646-201ENST00000578301 84 ntBASIC2.33□□□□□ -2.04
R3HCC1Q9Y3T6 MIR3129-201ENST00000581095 76 ntBASIC2.33□□□□□ -2.04
R3HCC1Q9Y3T6 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.33□□□□□ -2.04
R3HCC1Q9Y3T6 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.33□□□□□ -2.04
R3HCC1Q9Y3T6 AL442644.1-201ENST00000454390 3105 ntBASIC2.33□□□□□ -2.04
R3HCC1Q9Y3T6 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
R3HCC1Q9Y3T6 RNU6-1123P-201ENST00000362347 106 ntBASIC2.32□□□□□ -2.04
R3HCC1Q9Y3T6 MIR516B2-201ENST00000385190 85 ntBASIC2.32□□□□□ -2.04
R3HCC1Q9Y3T6 SNORD37.2-201ENST00000391075 66 ntBASIC2.32□□□□□ -2.04
R3HCC1Q9Y3T6 RN7SKP223-201ENST00000410582 62 ntBASIC2.32□□□□□ -2.04
R3HCC1Q9Y3T6 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.32□□□□□ -2.04
R3HCC1Q9Y3T6 SNORA77B-201ENST00000578179 125 ntBASIC2.32□□□□□ -2.04
R3HCC1Q9Y3T6 AC012493.3-201ENST00000604494 112 ntBASIC2.32□□□□□ -2.04
R3HCC1Q9Y3T6 AC015726.2-201ENST00000620112 122 ntBASIC2.32□□□□□ -2.04
R3HCC1Q9Y3T6 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.32□□□□□ -2.04
R3HCC1Q9Y3T6 AL359851.1-201ENST00000569460 4997 ntBASIC2.32□□□□□ -2.04
R3HCC1Q9Y3T6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
R3HCC1Q9Y3T6 SNORA25.7-201ENST00000364375 127 ntBASIC2.31□□□□□ -2.04
R3HCC1Q9Y3T6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
R3HCC1Q9Y3T6 SNORA75.5-201ENST00000391291 81 ntBASIC2.31□□□□□ -2.04
R3HCC1Q9Y3T6 RNA5SP489-201ENST00000410986 109 ntBASIC2.31□□□□□ -2.04
R3HCC1Q9Y3T6 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.31□□□□□ -2.04
R3HCC1Q9Y3T6 AF228730.3-201ENST00000436691 102 ntBASIC2.31□□□□□ -2.04
R3HCC1Q9Y3T6 RNA5SP272-201ENST00000516095 111 ntBASIC2.31□□□□□ -2.04
R3HCC1Q9Y3T6 AC112693.2-201ENST00000556538 232 ntBASIC2.31□□□□□ -2.04
R3HCC1Q9Y3T6 MIR4648-201ENST00000580107 72 ntBASIC2.31□□□□□ -2.04
R3HCC1Q9Y3T6 AL365205.2-201ENST00000594586 68 ntBASIC2.31□□□□□ -2.04
R3HCC1Q9Y3T6 AC106754.2-201ENST00000623006 233 ntBASIC2.31□□□□□ -2.04
R3HCC1Q9Y3T6 MIR219B-201ENST00000637023 88 ntBASIC2.31□□□□□ -2.04
R3HCC1Q9Y3T6 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
R3HCC1Q9Y3T6 SNORD38C-201ENST00000384381 69 ntBASIC2.3□□□□□ -2.04
R3HCC1Q9Y3T6 MIR569-201ENST00000385228 96 ntBASIC2.3□□□□□ -2.04
R3HCC1Q9Y3T6 RNU7-197P-201ENST00000458836 62 ntBASIC2.3□□□□□ -2.04
R3HCC1Q9Y3T6 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.3□□□□□ -2.04
R3HCC1Q9Y3T6 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.3□□□□□ -2.04
R3HCC1Q9Y3T6 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.3□□□□□ -2.04
R3HCC1Q9Y3T6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
R3HCC1Q9Y3T6 RNU6-199P-201ENST00000362954 107 ntBASIC2.29□□□□□ -2.04
R3HCC1Q9Y3T6 Y_RNA.488-201ENST00000384403 102 ntBASIC2.29□□□□□ -2.04
R3HCC1Q9Y3T6 MIR452-201ENST00000385020 85 ntBASIC2.29□□□□□ -2.04
R3HCC1Q9Y3T6 SNORD77.3-201ENST00000391113 65 ntBASIC2.29□□□□□ -2.04
R3HCC1Q9Y3T6 MIR1267-201ENST00000408723 78 ntBASIC2.29□□□□□ -2.04
R3HCC1Q9Y3T6 AC092991.1-201ENST00000477176 376 ntBASIC2.29□□□□□ -2.04
R3HCC1Q9Y3T6 RNU4-57P-201ENST00000515980 135 ntBASIC2.29□□□□□ -2.04
R3HCC1Q9Y3T6 SNORA25.12-201ENST00000516202 82 ntBASIC2.29□□□□□ -2.04
R3HCC1Q9Y3T6 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.29□□□□□ -2.04
R3HCC1Q9Y3T6 MIR548X2-201ENST00000579776 100 ntBASIC2.29□□□□□ -2.04
R3HCC1Q9Y3T6 AL627230.6-201ENST00000611129 280 ntBASIC2.29□□□□□ -2.04
R3HCC1Q9Y3T6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
R3HCC1Q9Y3T6 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
R3HCC1Q9Y3T6 RPL23AP42-201ENST00000471152 471 ntBASIC2.28□□□□□ -2.04
R3HCC1Q9Y3T6 RNU6-426P-201ENST00000516464 97 ntBASIC2.28□□□□□ -2.04
R3HCC1Q9Y3T6 MIR8074-201ENST00000615081 81 ntBASIC2.28□□□□□ -2.04
R3HCC1Q9Y3T6 MIR376A2-201ENST00000636782 80 ntBASIC2.28□□□□□ -2.04
R3HCC1Q9Y3T6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
R3HCC1Q9Y3T6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
R3HCC1Q9Y3T6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
R3HCC1Q9Y3T6 SNORD115-28-201ENST00000363931 81 ntBASIC2.27□□□□□ -2.05
R3HCC1Q9Y3T6 Y_RNA.251-201ENST00000364551 99 ntBASIC2.27□□□□□ -2.05
R3HCC1Q9Y3T6 Y_RNA.542-201ENST00000384641 111 ntBASIC2.27□□□□□ -2.05
R3HCC1Q9Y3T6 RNU6-938P-201ENST00000411285 103 ntBASIC2.27□□□□□ -2.05
R3HCC1Q9Y3T6 AL445646.1-201ENST00000431784 216 ntBASIC2.27□□□□□ -2.05
R3HCC1Q9Y3T6 RNU6-917P-201ENST00000516294 104 ntBASIC2.27□□□□□ -2.05
R3HCC1Q9Y3T6 DEFB122-202ENST00000569013 197 ntBASIC2.27□□□□□ -2.05
R3HCC1Q9Y3T6 MIR4298-201ENST00000584380 73 ntBASIC2.27□□□□□ -2.05
R3HCC1Q9Y3T6 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.26□□□□□ -2.05
R3HCC1Q9Y3T6 Y_RNA.37-201ENST00000362606 108 ntBASIC2.26□□□□□ -2.05
R3HCC1Q9Y3T6 Y_RNA.497-201ENST00000384447 98 ntBASIC2.26□□□□□ -2.05
R3HCC1Q9Y3T6 MIR513A1-201ENST00000385138 129 ntBASIC2.26□□□□□ -2.05
R3HCC1Q9Y3T6 MIR513C-201ENST00000401352 84 ntBASIC2.26□□□□□ -2.05
R3HCC1Q9Y3T6 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.26□□□□□ -2.05
R3HCC1Q9Y3T6 RNA5SP127-201ENST00000411051 133 ntBASIC2.26□□□□□ -2.05
R3HCC1Q9Y3T6 HMGN2P19-201ENST00000425149 265 ntBASIC2.26□□□□□ -2.05
R3HCC1Q9Y3T6 HMGN2P23-201ENST00000456759 269 ntBASIC2.26□□□□□ -2.05
R3HCC1Q9Y3T6 RNA5SP233-201ENST00000459153 113 ntBASIC2.26□□□□□ -2.05
R3HCC1Q9Y3T6 AC005908.1-201ENST00000468701 347 ntBASIC2.26□□□□□ -2.05
R3HCC1Q9Y3T6 RN7SL429P-201ENST00000479090 223 ntBASIC2.26□□□□□ -2.05
R3HCC1Q9Y3T6 RN7SL489P-201ENST00000486185 223 ntBASIC2.26□□□□□ -2.05
R3HCC1Q9Y3T6 RN7SL327P-201ENST00000488659 223 ntBASIC2.26□□□□□ -2.05
R3HCC1Q9Y3T6 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.26□□□□□ -2.05
R3HCC1Q9Y3T6 RNU6-830P-201ENST00000516353 107 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 152.6 ms