Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 Y_RNA.497-201ENST00000384447 98 ntBASIC2.04□□□□□ -2.08
SCAF8Q9UPN6 Y_RNA.568-201ENST00000384742 113 ntBASIC2.04□□□□□ -2.08
SCAF8Q9UPN6 MIR569-201ENST00000385228 96 ntBASIC2.04□□□□□ -2.08
SCAF8Q9UPN6 RNU2-7P-201ENST00000410794 178 ntBASIC2.04□□□□□ -2.08
SCAF8Q9UPN6 AL606753.1-201ENST00000427435 87 ntBASIC2.04□□□□□ -2.08
SCAF8Q9UPN6 SNORD11-201ENST00000459124 84 ntBASIC2.04□□□□□ -2.08
SCAF8Q9UPN6 RNA5SP57-201ENST00000459463 123 ntBASIC2.04□□□□□ -2.08
SCAF8Q9UPN6 AC018630.2-201ENST00000534866 2403 ntBASIC2.04□□□□□ -2.08
SCAF8Q9UPN6 MIR4299-201ENST00000577899 72 ntBASIC2.04□□□□□ -2.08
SCAF8Q9UPN6 AL096840.1-201ENST00000603287 93 ntBASIC2.04□□□□□ -2.08
SCAF8Q9UPN6 AC012493.3-201ENST00000604494 112 ntBASIC2.04□□□□□ -2.08
SCAF8Q9UPN6 MIR502-201ENST00000606349 86 ntBASIC2.04□□□□□ -2.08
SCAF8Q9UPN6 MIR6079-201ENST00000635807 62 ntBASIC2.04□□□□□ -2.08
SCAF8Q9UPN6 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SCAF8Q9UPN6 Y_RNA.116-201ENST00000363292 103 ntBASIC2.03□□□□□ -2.08
SCAF8Q9UPN6 RNU6-1080P-201ENST00000383982 107 ntBASIC2.03□□□□□ -2.08
SCAF8Q9UPN6 Y_RNA.621-201ENST00000411065 96 ntBASIC2.03□□□□□ -2.08
SCAF8Q9UPN6 HMGN2P19-201ENST00000425149 265 ntBASIC2.03□□□□□ -2.08
SCAF8Q9UPN6 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.03□□□□□ -2.08
SCAF8Q9UPN6 AC233266.1-201ENST00000454518 96 ntBASIC2.03□□□□□ -2.08
SCAF8Q9UPN6 RNU6-426P-201ENST00000516464 97 ntBASIC2.03□□□□□ -2.08
SCAF8Q9UPN6 RNU6-1291P-201ENST00000516591 104 ntBASIC2.03□□□□□ -2.08
SCAF8Q9UPN6 AL358944.1-201ENST00000528537 144 ntBASIC2.03□□□□□ -2.08
SCAF8Q9UPN6 MIR548X2-201ENST00000579776 100 ntBASIC2.03□□□□□ -2.08
SCAF8Q9UPN6 AC242852.1-201ENST00000612151 96 ntBASIC2.03□□□□□ -2.08
SCAF8Q9UPN6 uc_338.4-201ENST00000616635 176 ntBASIC2.03□□□□□ -2.08
SCAF8Q9UPN6 AC244015.1-201ENST00000622301 99 ntBASIC2.03□□□□□ -2.08
SCAF8Q9UPN6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SCAF8Q9UPN6 RNA5SP138-201ENST00000365098 114 ntBASIC2.02□□□□□ -2.09
SCAF8Q9UPN6 RNU6-81P-201ENST00000365608 104 ntBASIC2.02□□□□□ -2.09
SCAF8Q9UPN6 RNU6-484P-201ENST00000384016 107 ntBASIC2.02□□□□□ -2.09
SCAF8Q9UPN6 RNU6-768P-201ENST00000384683 107 ntBASIC2.02□□□□□ -2.09
SCAF8Q9UPN6 RNU2-55P-201ENST00000411146 174 ntBASIC2.02□□□□□ -2.09
SCAF8Q9UPN6 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.02□□□□□ -2.09
SCAF8Q9UPN6 RNA5SP272-201ENST00000516095 111 ntBASIC2.02□□□□□ -2.09
SCAF8Q9UPN6 RNU1-40P-201ENST00000516816 164 ntBASIC2.02□□□□□ -2.09
SCAF8Q9UPN6 RNU1-97P-201ENST00000516872 164 ntBASIC2.02□□□□□ -2.09
SCAF8Q9UPN6 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.02□□□□□ -2.09
SCAF8Q9UPN6 MIR4419B-201ENST00000577260 68 ntBASIC2.02□□□□□ -2.09
SCAF8Q9UPN6 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SCAF8Q9UPN6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
SCAF8Q9UPN6 Y_RNA.267-201ENST00000364679 109 ntBASIC2.01□□□□□ -2.09
SCAF8Q9UPN6 Y_RNA.327-201ENST00000365201 102 ntBASIC2.01□□□□□ -2.09
SCAF8Q9UPN6 Y_RNA.432-201ENST00000384087 111 ntBASIC2.01□□□□□ -2.09
SCAF8Q9UPN6 Y_RNA.521-201ENST00000384560 114 ntBASIC2.01□□□□□ -2.09
SCAF8Q9UPN6 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SCAF8Q9UPN6 SNORA79-201ENST00000408376 140 ntBASIC2.01□□□□□ -2.09
SCAF8Q9UPN6 AC004965.1-201ENST00000413033 213 ntBASIC2.01□□□□□ -2.09
SCAF8Q9UPN6 RPS27P1-201ENST00000450552 247 ntBASIC2.01□□□□□ -2.09
SCAF8Q9UPN6 SNORD77.4-201ENST00000516158 81 ntBASIC2.01□□□□□ -2.09
SCAF8Q9UPN6 RNU6-197P-201ENST00000516680 100 ntBASIC2.01□□□□□ -2.09
SCAF8Q9UPN6 RNU6-341P-201ENST00000516973 96 ntBASIC2.01□□□□□ -2.09
SCAF8Q9UPN6 AL512598.1-201ENST00000610158 273 ntBASIC2.01□□□□□ -2.09
SCAF8Q9UPN6 JPX_2.1-201ENST00000614161 69 ntBASIC2.01□□□□□ -2.09
SCAF8Q9UPN6 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.01□□□□□ -2.09
SCAF8Q9UPN6 RNU6-199P-201ENST00000362954 107 ntBASIC2□□□□□ -2.09
SCAF8Q9UPN6 Y_RNA.393-201ENST00000383936 102 ntBASIC2□□□□□ -2.09
SCAF8Q9UPN6 SNORA67.5-201ENST00000391036 107 ntBASIC2□□□□□ -2.09
SCAF8Q9UPN6 SNORD37.2-201ENST00000391075 66 ntBASIC2□□□□□ -2.09
SCAF8Q9UPN6 AC023449.1-201ENST00000454464 154 ntBASIC2□□□□□ -2.09
SCAF8Q9UPN6 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2□□□□□ -2.09
SCAF8Q9UPN6 SNORA25.12-201ENST00000516202 82 ntBASIC2□□□□□ -2.09
SCAF8Q9UPN6 RNU6-1299P-201ENST00000516316 100 ntBASIC2□□□□□ -2.09
SCAF8Q9UPN6 SNORA44.1-201ENST00000517031 108 ntBASIC2□□□□□ -2.09
SCAF8Q9UPN6 MIR378D2-201ENST00000580636 98 ntBASIC2□□□□□ -2.09
SCAF8Q9UPN6 MIR3935-201ENST00000583472 104 ntBASIC2□□□□□ -2.09
SCAF8Q9UPN6 AC091895.1-201ENST00000624494 256 ntBASIC2□□□□□ -2.09
SCAF8Q9UPN6 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2□□□□□ -2.09
SCAF8Q9UPN6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
SCAF8Q9UPN6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SCAF8Q9UPN6 Y_RNA.253-201ENST00000364562 112 ntBASIC1.99□□□□□ -2.09
SCAF8Q9UPN6 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SCAF8Q9UPN6 Y_RNA.586-201ENST00000391146 98 ntBASIC1.99□□□□□ -2.09
SCAF8Q9UPN6 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.99□□□□□ -2.09
SCAF8Q9UPN6 MIR513C-201ENST00000401352 84 ntBASIC1.99□□□□□ -2.09
SCAF8Q9UPN6 RN7SKP200-201ENST00000410564 320 ntBASIC1.99□□□□□ -2.09
SCAF8Q9UPN6 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.99□□□□□ -2.09
SCAF8Q9UPN6 NDUFA4P2-201ENST00000489989 244 ntBASIC1.99□□□□□ -2.09
SCAF8Q9UPN6 HMGN1P7-201ENST00000491722 313 ntBASIC1.99□□□□□ -2.09
SCAF8Q9UPN6 RNU7-149P-201ENST00000516739 59 ntBASIC1.99□□□□□ -2.09
SCAF8Q9UPN6 RNU7-28P-201ENST00000516759 62 ntBASIC1.99□□□□□ -2.09
SCAF8Q9UPN6 SNORA31.17-201ENST00000516953 127 ntBASIC1.99□□□□□ -2.09
SCAF8Q9UPN6 AL160236.1-201ENST00000556317 195 ntBASIC1.99□□□□□ -2.09
SCAF8Q9UPN6 AC112693.2-201ENST00000556538 232 ntBASIC1.99□□□□□ -2.09
SCAF8Q9UPN6 MIR3646-201ENST00000578301 84 ntBASIC1.99□□□□□ -2.09
SCAF8Q9UPN6 MIR6844-201ENST00000637122 62 ntBASIC1.99□□□□□ -2.09
SCAF8Q9UPN6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SCAF8Q9UPN6 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SCAF8Q9UPN6 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
SCAF8Q9UPN6 SNORA1B-201ENST00000362535 133 ntBASIC1.98□□□□□ -2.09
SCAF8Q9UPN6 MIR548I2-201ENST00000408348 149 ntBASIC1.98□□□□□ -2.09
SCAF8Q9UPN6 MIR1276-201ENST00000408707 83 ntBASIC1.98□□□□□ -2.09
SCAF8Q9UPN6 RNU6-257P-201ENST00000410238 98 ntBASIC1.98□□□□□ -2.09
SCAF8Q9UPN6 RPL30P13-201ENST00000418873 348 ntBASIC1.98□□□□□ -2.09
SCAF8Q9UPN6 SNRPGP10-201ENST00000432323 225 ntBASIC1.98□□□□□ -2.09
SCAF8Q9UPN6 HSPE1P9-201ENST00000440046 311 ntBASIC1.98□□□□□ -2.09
SCAF8Q9UPN6 RNU7-197P-201ENST00000458836 62 ntBASIC1.98□□□□□ -2.09
SCAF8Q9UPN6 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SCAF8Q9UPN6 AC010332.2-201ENST00000613083 1904 ntBASIC1.97□□□□□ -2.09
SCAF8Q9UPN6 Y_RNA.91-201ENST00000363042 107 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms