Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 RNU6-1061P-201ENST00000516530 99 ntBASIC2.2□□□□□ -2.06
CDC42EP3Q9UKI2 SCARNA16.3-201ENST00000516595 184 ntBASIC2.2□□□□□ -2.06
CDC42EP3Q9UKI2 RNU6-1116P-201ENST00000517269 99 ntBASIC2.2□□□□□ -2.06
CDC42EP3Q9UKI2 IGKV1-22-201ENST00000524313 326 ntBASIC2.2□□□□□ -2.06
CDC42EP3Q9UKI2 AC015712.3-201ENST00000559380 164 ntBASIC2.2□□□□□ -2.06
CDC42EP3Q9UKI2 ZNF861P-201ENST00000588126 639 ntBASIC2.2□□□□□ -2.06
CDC42EP3Q9UKI2 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.2□□□□□ -2.06
CDC42EP3Q9UKI2 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
CDC42EP3Q9UKI2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CDC42EP3Q9UKI2 AC245060.5-201ENST00000610778 3293 ntBASIC2.19□□□□□ -2.06
CDC42EP3Q9UKI2 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CDC42EP3Q9UKI2 RNU6-833P-201ENST00000363486 107 ntBASIC2.19□□□□□ -2.06
CDC42EP3Q9UKI2 SNORA4.2-201ENST00000365313 147 ntBASIC2.19□□□□□ -2.06
CDC42EP3Q9UKI2 RNU6-424P-201ENST00000384367 105 ntBASIC2.19□□□□□ -2.06
CDC42EP3Q9UKI2 RNU6-1031P-201ENST00000384773 107 ntBASIC2.19□□□□□ -2.06
CDC42EP3Q9UKI2 MIR520A-201ENST00000384862 85 ntBASIC2.19□□□□□ -2.06
CDC42EP3Q9UKI2 CALM2P4-201ENST00000430810 426 ntBASIC2.19□□□□□ -2.06
CDC42EP3Q9UKI2 AL445646.1-201ENST00000431784 216 ntBASIC2.19□□□□□ -2.06
CDC42EP3Q9UKI2 SNORA31.11-201ENST00000516528 139 ntBASIC2.19□□□□□ -2.06
CDC42EP3Q9UKI2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.19□□□□□ -2.06
CDC42EP3Q9UKI2 SNORD14A-201ENST00000606526 91 ntBASIC2.19□□□□□ -2.06
CDC42EP3Q9UKI2 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.19□□□□□ -2.06
CDC42EP3Q9UKI2 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
CDC42EP3Q9UKI2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CDC42EP3Q9UKI2 Y_RNA.440-201ENST00000384120 114 ntBASIC2.18□□□□□ -2.06
CDC42EP3Q9UKI2 RNU6-163P-201ENST00000384396 106 ntBASIC2.18□□□□□ -2.06
CDC42EP3Q9UKI2 MIR144-201ENST00000384886 86 ntBASIC2.18□□□□□ -2.06
CDC42EP3Q9UKI2 U8.16-201ENST00000391279 133 ntBASIC2.18□□□□□ -2.06
CDC42EP3Q9UKI2 RNA5SP181-201ENST00000410246 98 ntBASIC2.18□□□□□ -2.06
CDC42EP3Q9UKI2 RNU4-53P-201ENST00000410828 140 ntBASIC2.18□□□□□ -2.06
CDC42EP3Q9UKI2 Z98742.3-201ENST00000418637 326 ntBASIC2.18□□□□□ -2.06
CDC42EP3Q9UKI2 SUMO1P4-201ENST00000429430 302 ntBASIC2.18□□□□□ -2.06
CDC42EP3Q9UKI2 RNU5E-3P-201ENST00000515913 68 ntBASIC2.18□□□□□ -2.06
CDC42EP3Q9UKI2 SNORD36C-201ENST00000516733 66 ntBASIC2.18□□□□□ -2.06
CDC42EP3Q9UKI2 RNA5SP402-201ENST00000517148 110 ntBASIC2.18□□□□□ -2.06
CDC42EP3Q9UKI2 RNA5SP437-201ENST00000517249 129 ntBASIC2.18□□□□□ -2.06
CDC42EP3Q9UKI2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
CDC42EP3Q9UKI2 RNU1-52P-201ENST00000384190 164 ntBASIC2.17□□□□□ -2.06
CDC42EP3Q9UKI2 RNY4P18-201ENST00000391107 89 ntBASIC2.17□□□□□ -2.06
CDC42EP3Q9UKI2 AL591806.2-201ENST00000433122 173 ntBASIC2.17□□□□□ -2.06
CDC42EP3Q9UKI2 SNORD33.1-201ENST00000516213 88 ntBASIC2.17□□□□□ -2.06
CDC42EP3Q9UKI2 RNA5SP282-201ENST00000516355 108 ntBASIC2.17□□□□□ -2.06
CDC42EP3Q9UKI2 RNU6-589P-201ENST00000516485 107 ntBASIC2.17□□□□□ -2.06
CDC42EP3Q9UKI2 RNA5SP168-201ENST00000516642 112 ntBASIC2.17□□□□□ -2.06
CDC42EP3Q9UKI2 RNU6-548P-201ENST00000517083 115 ntBASIC2.17□□□□□ -2.06
CDC42EP3Q9UKI2 SNORA31.25-201ENST00000517242 134 ntBASIC2.17□□□□□ -2.06
CDC42EP3Q9UKI2 MIR4648-201ENST00000580107 72 ntBASIC2.17□□□□□ -2.06
CDC42EP3Q9UKI2 AL670379.3-201ENST00000605040 251 ntBASIC2.17□□□□□ -2.06
CDC42EP3Q9UKI2 MIR6129-201ENST00000616087 109 ntBASIC2.17□□□□□ -2.06
CDC42EP3Q9UKI2 U4.3-201ENST00000621047 82 ntBASIC2.17□□□□□ -2.06
CDC42EP3Q9UKI2 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.17□□□□□ -2.06
CDC42EP3Q9UKI2 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CDC42EP3Q9UKI2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CDC42EP3Q9UKI2 ZNF720P1-201ENST00000562403 1939 ntBASIC2.17□□□□□ -2.06
CDC42EP3Q9UKI2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CDC42EP3Q9UKI2 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.16□□□□□ -2.06
CDC42EP3Q9UKI2 RNU1-51P-201ENST00000365345 176 ntBASIC2.16□□□□□ -2.06
CDC42EP3Q9UKI2 Y_RNA.346-201ENST00000365385 112 ntBASIC2.16□□□□□ -2.06
CDC42EP3Q9UKI2 SNORA2.2-201ENST00000365473 135 ntBASIC2.16□□□□□ -2.06
CDC42EP3Q9UKI2 SNORD38C-201ENST00000384381 69 ntBASIC2.16□□□□□ -2.06
CDC42EP3Q9UKI2 RNA5SP270-201ENST00000411361 118 ntBASIC2.16□□□□□ -2.06
CDC42EP3Q9UKI2 AL356320.1-201ENST00000429616 163 ntBASIC2.16□□□□□ -2.06
CDC42EP3Q9UKI2 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.16□□□□□ -2.06
CDC42EP3Q9UKI2 AC003982.1-202ENST00000469928 248 ntBASIC2.16□□□□□ -2.06
CDC42EP3Q9UKI2 RPL23AP63-201ENST00000498752 471 ntBASIC2.16□□□□□ -2.06
CDC42EP3Q9UKI2 Y_RNA.709-201ENST00000516952 92 ntBASIC2.16□□□□□ -2.06
CDC42EP3Q9UKI2 AP003484.1-201ENST00000530974 250 ntBASIC2.16□□□□□ -2.06
CDC42EP3Q9UKI2 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.16□□□□□ -2.06
CDC42EP3Q9UKI2 U1.36-201ENST00000620684 176 ntBASIC2.16□□□□□ -2.06
CDC42EP3Q9UKI2 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.16□□□□□ -2.06
CDC42EP3Q9UKI2 AC080100.1-201ENST00000624239 5356 ntBASIC2.16□□□□□ -2.06
CDC42EP3Q9UKI2 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CDC42EP3Q9UKI2 SNORA3A-201ENST00000364113 130 ntBASIC2.15□□□□□ -2.07
CDC42EP3Q9UKI2 RNA5SP450-201ENST00000411206 102 ntBASIC2.15□□□□□ -2.07
CDC42EP3Q9UKI2 AC015922.2-201ENST00000435593 184 ntBASIC2.15□□□□□ -2.07
CDC42EP3Q9UKI2 RNA5SP481-201ENST00000516814 122 ntBASIC2.15□□□□□ -2.07
CDC42EP3Q9UKI2 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.15□□□□□ -2.07
CDC42EP3Q9UKI2 AC025166.1-201ENST00000612411 163 ntBASIC2.15□□□□□ -2.07
CDC42EP3Q9UKI2 AC015726.2-201ENST00000620112 122 ntBASIC2.15□□□□□ -2.07
CDC42EP3Q9UKI2 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.14□□□□□ -2.07
CDC42EP3Q9UKI2 RNU6-349P-201ENST00000362402 107 ntBASIC2.14□□□□□ -2.07
CDC42EP3Q9UKI2 MIR27B-201ENST00000385129 97 ntBASIC2.14□□□□□ -2.07
CDC42EP3Q9UKI2 AL627390.1-201ENST00000396055 340 ntBASIC2.14□□□□□ -2.07
CDC42EP3Q9UKI2 RNA5SP100-201ENST00000410903 110 ntBASIC2.14□□□□□ -2.07
CDC42EP3Q9UKI2 RNA5SP136-201ENST00000410906 107 ntBASIC2.14□□□□□ -2.07
CDC42EP3Q9UKI2 RNA5SP59-201ENST00000410922 110 ntBASIC2.14□□□□□ -2.07
CDC42EP3Q9UKI2 RNA5SP247-201ENST00000411181 105 ntBASIC2.14□□□□□ -2.07
CDC42EP3Q9UKI2 AC099513.1-201ENST00000490423 301 ntBASIC2.14□□□□□ -2.07
CDC42EP3Q9UKI2 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.14□□□□□ -2.07
CDC42EP3Q9UKI2 MTND5P34-201ENST00000568888 325 ntBASIC2.14□□□□□ -2.07
CDC42EP3Q9UKI2 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.14□□□□□ -2.07
CDC42EP3Q9UKI2 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.14□□□□□ -2.07
CDC42EP3Q9UKI2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.14□□□□□ -2.07
CDC42EP3Q9UKI2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CDC42EP3Q9UKI2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CDC42EP3Q9UKI2 MTND5P18-201ENST00000445624 1801 ntBASIC2.13□□□□□ -2.07
CDC42EP3Q9UKI2 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CDC42EP3Q9UKI2 RNU6-755P-201ENST00000364400 103 ntBASIC2.13□□□□□ -2.07
CDC42EP3Q9UKI2 RNU6-153P-201ENST00000364422 104 ntBASIC2.13□□□□□ -2.07
CDC42EP3Q9UKI2 AC021506.2-201ENST00000612354 169 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms