Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RNU4-62P-201ENST00000410125 130 ntBASIC1.24□□□□□ -2.21
NDE1Q9NXR1 AC245047.8-201ENST00000456455 284 ntBASIC1.24□□□□□ -2.21
NDE1Q9NXR1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.24□□□□□ -2.21
NDE1Q9NXR1 RNU6-917P-201ENST00000516294 104 ntBASIC1.24□□□□□ -2.21
NDE1Q9NXR1 RNU6-453P-201ENST00000516819 85 ntBASIC1.24□□□□□ -2.21
NDE1Q9NXR1 MIR2681-201ENST00000581814 105 ntBASIC1.24□□□□□ -2.21
NDE1Q9NXR1 AC078938.1-201ENST00000620993 318 ntBASIC1.24□□□□□ -2.21
NDE1Q9NXR1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.23□□□□□ -2.21
NDE1Q9NXR1 RNU6-199P-201ENST00000362954 107 ntBASIC1.23□□□□□ -2.21
NDE1Q9NXR1 RNU6-379P-201ENST00000363813 104 ntBASIC1.23□□□□□ -2.21
NDE1Q9NXR1 snoU2-30.1-201ENST00000365012 70 ntBASIC1.23□□□□□ -2.21
NDE1Q9NXR1 RNY4P28-201ENST00000365281 93 ntBASIC1.23□□□□□ -2.21
NDE1Q9NXR1 MIR516B2-201ENST00000385190 85 ntBASIC1.23□□□□□ -2.21
NDE1Q9NXR1 MIR518E-201ENST00000385252 88 ntBASIC1.23□□□□□ -2.21
NDE1Q9NXR1 SNORA67.5-201ENST00000391036 107 ntBASIC1.23□□□□□ -2.21
NDE1Q9NXR1 Y_RNA.587-201ENST00000391210 103 ntBASIC1.23□□□□□ -2.21
NDE1Q9NXR1 MIR891A-201ENST00000401237 79 ntBASIC1.23□□□□□ -2.21
NDE1Q9NXR1 MIR1285-1-201ENST00000408593 84 ntBASIC1.23□□□□□ -2.21
NDE1Q9NXR1 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.23□□□□□ -2.21
NDE1Q9NXR1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.23□□□□□ -2.21
NDE1Q9NXR1 SCARNA8-201ENST00000515924 131 ntBASIC1.23□□□□□ -2.21
NDE1Q9NXR1 RNU6-922P-201ENST00000516753 99 ntBASIC1.23□□□□□ -2.21
NDE1Q9NXR1 RNU6-388P-201ENST00000517012 105 ntBASIC1.23□□□□□ -2.21
NDE1Q9NXR1 RNU6-389P-201ENST00000517048 105 ntBASIC1.23□□□□□ -2.21
NDE1Q9NXR1 AL021707.8-201ENST00000609428 183 ntBASIC1.23□□□□□ -2.21
NDE1Q9NXR1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
NDE1Q9NXR1 RNU6-833P-201ENST00000363486 107 ntBASIC1.22□□□□□ -2.21
NDE1Q9NXR1 Y_RNA.262-201ENST00000364641 102 ntBASIC1.22□□□□□ -2.21
NDE1Q9NXR1 MIR802-201ENST00000390235 94 ntBASIC1.22□□□□□ -2.21
NDE1Q9NXR1 SNORD58.1-201ENST00000391313 66 ntBASIC1.22□□□□□ -2.21
NDE1Q9NXR1 MIR1298-201ENST00000408783 112 ntBASIC1.22□□□□□ -2.21
NDE1Q9NXR1 Y_RNA.618-201ENST00000410949 107 ntBASIC1.22□□□□□ -2.21
NDE1Q9NXR1 Y_RNA.626-201ENST00000411288 95 ntBASIC1.22□□□□□ -2.21
NDE1Q9NXR1 AP1B1P2-201ENST00000416196 106 ntBASIC1.22□□□□□ -2.21
NDE1Q9NXR1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.22□□□□□ -2.21
NDE1Q9NXR1 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.22□□□□□ -2.21
NDE1Q9NXR1 MIR3937-201ENST00000580135 106 ntBASIC1.22□□□□□ -2.21
NDE1Q9NXR1 AC008507.4-201ENST00000585464 127 ntBASIC1.22□□□□□ -2.21
NDE1Q9NXR1 AL512598.1-201ENST00000610158 273 ntBASIC1.22□□□□□ -2.21
NDE1Q9NXR1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.22□□□□□ -2.21
NDE1Q9NXR1 AC027279.3-201ENST00000625055 122 ntBASIC1.22□□□□□ -2.21
NDE1Q9NXR1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.21□□□□□ -2.22
NDE1Q9NXR1 SNORD14E-201ENST00000364009 85 ntBASIC1.21□□□□□ -2.22
NDE1Q9NXR1 Y_RNA.224-201ENST00000364308 111 ntBASIC1.21□□□□□ -2.22
NDE1Q9NXR1 Y_RNA.489-201ENST00000384410 101 ntBASIC1.21□□□□□ -2.22
NDE1Q9NXR1 RNU1-123P-201ENST00000458950 160 ntBASIC1.21□□□□□ -2.22
NDE1Q9NXR1 AC079140.2-201ENST00000506193 142 ntBASIC1.21□□□□□ -2.22
NDE1Q9NXR1 RNA5SP445-201ENST00000515889 115 ntBASIC1.21□□□□□ -2.22
NDE1Q9NXR1 RNU4-71P-201ENST00000516258 113 ntBASIC1.21□□□□□ -2.22
NDE1Q9NXR1 RNU6-1007P-201ENST00000516586 107 ntBASIC1.21□□□□□ -2.22
NDE1Q9NXR1 RNU7-149P-201ENST00000516739 59 ntBASIC1.21□□□□□ -2.22
NDE1Q9NXR1 Y_RNA.714-201ENST00000517065 90 ntBASIC1.21□□□□□ -2.22
NDE1Q9NXR1 DNAJC19P9-201ENST00000555084 351 ntBASIC1.21□□□□□ -2.22
NDE1Q9NXR1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.21□□□□□ -2.22
NDE1Q9NXR1 MIR4422-201ENST00000581938 83 ntBASIC1.21□□□□□ -2.22
NDE1Q9NXR1 FAM106DP-201ENST00000586416 501 ntBASIC1.21□□□□□ -2.22
NDE1Q9NXR1 AP000942.4-201ENST00000604811 241 ntBASIC1.21□□□□□ -2.22
NDE1Q9NXR1 uc_338.4-201ENST00000616635 176 ntBASIC1.21□□□□□ -2.22
NDE1Q9NXR1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
NDE1Q9NXR1 RNU4-17P-201ENST00000365598 141 ntBASIC1.2□□□□□ -2.22
NDE1Q9NXR1 RNU6-381P-201ENST00000391259 108 ntBASIC1.2□□□□□ -2.22
NDE1Q9NXR1 RPS27P16-201ENST00000425758 201 ntBASIC1.2□□□□□ -2.22
NDE1Q9NXR1 AC027119.1-201ENST00000440877 241 ntBASIC1.2□□□□□ -2.22
NDE1Q9NXR1 RPS29P29-201ENST00000456396 171 ntBASIC1.2□□□□□ -2.22
NDE1Q9NXR1 AC090142.3-201ENST00000519012 385 ntBASIC1.2□□□□□ -2.22
NDE1Q9NXR1 MIR4308-201ENST00000580634 81 ntBASIC1.2□□□□□ -2.22
NDE1Q9NXR1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.2□□□□□ -2.22
NDE1Q9NXR1 Y_RNA.116-201ENST00000363292 103 ntBASIC1.19□□□□□ -2.22
NDE1Q9NXR1 Y_RNA.199-201ENST00000364014 102 ntBASIC1.19□□□□□ -2.22
NDE1Q9NXR1 RNU6-939P-201ENST00000384634 107 ntBASIC1.19□□□□□ -2.22
NDE1Q9NXR1 RNA5SP496-201ENST00000391240 109 ntBASIC1.19□□□□□ -2.22
NDE1Q9NXR1 RNU1-78P-201ENST00000391248 165 ntBASIC1.19□□□□□ -2.22
NDE1Q9NXR1 Y_RNA.622-201ENST00000411091 108 ntBASIC1.19□□□□□ -2.22
NDE1Q9NXR1 AC009474.2-201ENST00000451383 136 ntBASIC1.19□□□□□ -2.22
NDE1Q9NXR1 AC023449.1-201ENST00000454464 154 ntBASIC1.19□□□□□ -2.22
NDE1Q9NXR1 snoU13.18-201ENST00000459483 104 ntBASIC1.19□□□□□ -2.22
NDE1Q9NXR1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.19□□□□□ -2.22
NDE1Q9NXR1 AC130289.1-201ENST00000577321 73 ntBASIC1.19□□□□□ -2.22
NDE1Q9NXR1 MIR4303-201ENST00000581299 66 ntBASIC1.19□□□□□ -2.22
NDE1Q9NXR1 RNU2-4P-201ENST00000606190 192 ntBASIC1.19□□□□□ -2.22
NDE1Q9NXR1 Pinc.1-201ENST00000616452 154 ntBASIC1.19□□□□□ -2.22
NDE1Q9NXR1 RNU6-268P-201ENST00000364174 107 ntBASIC1.18□□□□□ -2.22
NDE1Q9NXR1 Y_RNA.274-201ENST00000364714 101 ntBASIC1.18□□□□□ -2.22
NDE1Q9NXR1 RNU6-442P-201ENST00000383968 104 ntBASIC1.18□□□□□ -2.22
NDE1Q9NXR1 Y_RNA.466-201ENST00000384294 113 ntBASIC1.18□□□□□ -2.22
NDE1Q9NXR1 Y_RNA.476-201ENST00000384347 108 ntBASIC1.18□□□□□ -2.22
NDE1Q9NXR1 MIR452-201ENST00000385020 85 ntBASIC1.18□□□□□ -2.22
NDE1Q9NXR1 SNORD41-201ENST00000386967 70 ntBASIC1.18□□□□□ -2.22
NDE1Q9NXR1 AL606845.1-201ENST00000404881 255 ntBASIC1.18□□□□□ -2.22
NDE1Q9NXR1 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.18□□□□□ -2.22
NDE1Q9NXR1 SNX2P2-201ENST00000424553 323 ntBASIC1.18□□□□□ -2.22
NDE1Q9NXR1 SNRPGP14-201ENST00000435400 219 ntBASIC1.18□□□□□ -2.22
NDE1Q9NXR1 HMGN2P32-201ENST00000444648 269 ntBASIC1.18□□□□□ -2.22
NDE1Q9NXR1 RPS29P28-201ENST00000446439 141 ntBASIC1.18□□□□□ -2.22
NDE1Q9NXR1 SNORD77.4-201ENST00000516158 81 ntBASIC1.18□□□□□ -2.22
NDE1Q9NXR1 RNU6-561P-201ENST00000516222 102 ntBASIC1.18□□□□□ -2.22
NDE1Q9NXR1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
NDE1Q9NXR1 Y_RNA.200-201ENST00000364018 102 ntBASIC1.17□□□□□ -2.22
NDE1Q9NXR1 RNY1-201ENST00000364228 113 ntBASIC1.17□□□□□ -2.22
NDE1Q9NXR1 RNU6-47P-201ENST00000383866 107 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms