Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 AP004217.1-201ENST00000480579 346 ntBASIC2.78□□□□□ -1.96
TMEM39AQ9NV64 RPS26P48-201ENST00000491713 339 ntBASIC2.78□□□□□ -1.96
TMEM39AQ9NV64 RNU6-240P-201ENST00000516098 97 ntBASIC2.78□□□□□ -1.96
TMEM39AQ9NV64 SNORA9.3-201ENST00000516383 129 ntBASIC2.78□□□□□ -1.96
TMEM39AQ9NV64 SNORA31.10-201ENST00000516482 106 ntBASIC2.78□□□□□ -1.96
TMEM39AQ9NV64 RNU7-70P-201ENST00000516941 66 ntBASIC2.78□□□□□ -1.96
TMEM39AQ9NV64 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
TMEM39AQ9NV64 AC008555.8-201ENST00000623602 2168 ntBASIC2.77□□□□□ -1.97
TMEM39AQ9NV64 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TMEM39AQ9NV64 AC069257.2-201ENST00000441819 155 ntBASIC2.77□□□□□ -1.97
TMEM39AQ9NV64 RNA5SP137-201ENST00000516833 135 ntBASIC2.77□□□□□ -1.97
TMEM39AQ9NV64 RNU6-548P-201ENST00000517083 115 ntBASIC2.77□□□□□ -1.97
TMEM39AQ9NV64 ZNF720P1-201ENST00000562403 1939 ntBASIC2.76□□□□□ -1.97
TMEM39AQ9NV64 RNA5SP99-201ENST00000364020 114 ntBASIC2.76□□□□□ -1.97
TMEM39AQ9NV64 RNU6-938P-201ENST00000411285 103 ntBASIC2.76□□□□□ -1.97
TMEM39AQ9NV64 AL603825.1-201ENST00000438481 80 ntBASIC2.76□□□□□ -1.97
TMEM39AQ9NV64 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TMEM39AQ9NV64 AC234781.5-201ENST00000508429 271 ntBASIC2.76□□□□□ -1.97
TMEM39AQ9NV64 AP003484.1-201ENST00000530974 250 ntBASIC2.76□□□□□ -1.97
TMEM39AQ9NV64 MIR1273D-201ENST00000577266 86 ntBASIC2.76□□□□□ -1.97
TMEM39AQ9NV64 MIR4679-2-201ENST00000578358 77 ntBASIC2.76□□□□□ -1.97
TMEM39AQ9NV64 MIRLET7C-201ENST00000362160 84 ntBASIC2.75□□□□□ -1.97
TMEM39AQ9NV64 RNU6-690P-201ENST00000365242 106 ntBASIC2.75□□□□□ -1.97
TMEM39AQ9NV64 Y_RNA.440-201ENST00000384120 114 ntBASIC2.75□□□□□ -1.97
TMEM39AQ9NV64 SNORD38C-201ENST00000384381 69 ntBASIC2.75□□□□□ -1.97
TMEM39AQ9NV64 AL359511.1-201ENST00000402970 211 ntBASIC2.75□□□□□ -1.97
TMEM39AQ9NV64 AC087499.4-201ENST00000448505 178 ntBASIC2.75□□□□□ -1.97
TMEM39AQ9NV64 COX6CP6-201ENST00000490840 228 ntBASIC2.75□□□□□ -1.97
TMEM39AQ9NV64 Y_RNA.676-201ENST00000516393 96 ntBASIC2.75□□□□□ -1.97
TMEM39AQ9NV64 SNORA18.7-201ENST00000516910 131 ntBASIC2.75□□□□□ -1.97
TMEM39AQ9NV64 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
TMEM39AQ9NV64 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TMEM39AQ9NV64 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
TMEM39AQ9NV64 MIR570-201ENST00000384917 97 ntBASIC2.74□□□□□ -1.97
TMEM39AQ9NV64 MIR1283-2-201ENST00000408621 87 ntBASIC2.74□□□□□ -1.97
TMEM39AQ9NV64 RN7SKP200-201ENST00000410564 320 ntBASIC2.74□□□□□ -1.97
TMEM39AQ9NV64 HSPE1P9-201ENST00000440046 311 ntBASIC2.74□□□□□ -1.97
TMEM39AQ9NV64 RNU6-826P-201ENST00000516827 104 ntBASIC2.74□□□□□ -1.97
TMEM39AQ9NV64 AC007012.1-201ENST00000567192 175 ntBASIC2.74□□□□□ -1.97
TMEM39AQ9NV64 AL161431.1-201ENST00000618966 4205 ntBASIC2.73□□□□□ -1.97
TMEM39AQ9NV64 SNORD114-1-201ENST00000362705 72 ntBASIC2.73□□□□□ -1.97
TMEM39AQ9NV64 RNU1-133P-201ENST00000364867 167 ntBASIC2.73□□□□□ -1.97
TMEM39AQ9NV64 Y_RNA.351-201ENST00000365436 96 ntBASIC2.73□□□□□ -1.97
TMEM39AQ9NV64 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
TMEM39AQ9NV64 AL034345.1-201ENST00000407768 123 ntBASIC2.73□□□□□ -1.97
TMEM39AQ9NV64 RNU6-412P-201ENST00000516434 106 ntBASIC2.73□□□□□ -1.97
TMEM39AQ9NV64 RNA5SP281-201ENST00000516504 135 ntBASIC2.73□□□□□ -1.97
TMEM39AQ9NV64 MIR4658-201ENST00000584344 65 ntBASIC2.73□□□□□ -1.97
TMEM39AQ9NV64 AC027279.3-201ENST00000625055 122 ntBASIC2.73□□□□□ -1.97
TMEM39AQ9NV64 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TMEM39AQ9NV64 RNU6-349P-201ENST00000362402 107 ntBASIC2.72□□□□□ -1.97
TMEM39AQ9NV64 RNU6-1298P-201ENST00000362456 101 ntBASIC2.72□□□□□ -1.97
TMEM39AQ9NV64 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.72□□□□□ -1.97
TMEM39AQ9NV64 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
TMEM39AQ9NV64 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.71□□□□□ -1.97
TMEM39AQ9NV64 RNU6-950P-201ENST00000384651 107 ntBASIC2.71□□□□□ -1.98
TMEM39AQ9NV64 MIR518A2-201ENST00000384966 87 ntBASIC2.71□□□□□ -1.98
TMEM39AQ9NV64 U8.16-201ENST00000391279 133 ntBASIC2.71□□□□□ -1.98
TMEM39AQ9NV64 AL590004.2-201ENST00000404787 371 ntBASIC2.71□□□□□ -1.98
TMEM39AQ9NV64 RNU7-80P-201ENST00000459562 61 ntBASIC2.71□□□□□ -1.98
TMEM39AQ9NV64 AC002984.1-201ENST00000591692 448 ntBASIC2.71□□□□□ -1.98
TMEM39AQ9NV64 AC021443.1-201ENST00000604478 211 ntBASIC2.71□□□□□ -1.98
TMEM39AQ9NV64 AC046143.2-201ENST00000609789 160 ntBASIC2.71□□□□□ -1.98
TMEM39AQ9NV64 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.71□□□□□ -1.98
TMEM39AQ9NV64 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.71□□□□□ -1.98
TMEM39AQ9NV64 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
TMEM39AQ9NV64 Y_RNA.116-201ENST00000363292 103 ntBASIC2.7□□□□□ -1.98
TMEM39AQ9NV64 SNORA25.6-201ENST00000364121 118 ntBASIC2.7□□□□□ -1.98
TMEM39AQ9NV64 SNORA63D-201ENST00000364359 132 ntBASIC2.7□□□□□ -1.98
TMEM39AQ9NV64 Y_RNA.281-201ENST00000364774 94 ntBASIC2.7□□□□□ -1.98
TMEM39AQ9NV64 SNORA4.2-201ENST00000365313 147 ntBASIC2.7□□□□□ -1.98
TMEM39AQ9NV64 RNY1P6-201ENST00000384193 109 ntBASIC2.7□□□□□ -1.98
TMEM39AQ9NV64 RNA5SP465-201ENST00000391195 109 ntBASIC2.7□□□□□ -1.98
TMEM39AQ9NV64 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.7□□□□□ -1.98
TMEM39AQ9NV64 AL031737.1-201ENST00000450125 223 ntBASIC2.7□□□□□ -1.98
TMEM39AQ9NV64 RNVU1-2-201ENST00000516326 135 ntBASIC2.7□□□□□ -1.98
TMEM39AQ9NV64 RNY4P20-201ENST00000516678 93 ntBASIC2.7□□□□□ -1.98
TMEM39AQ9NV64 uc_338.28-201ENST00000612082 187 ntBASIC2.7□□□□□ -1.98
TMEM39AQ9NV64 AL353997.5-201ENST00000618886 171 ntBASIC2.7□□□□□ -1.98
TMEM39AQ9NV64 AL596211.1-201ENST00000569873 2277 ntBASIC2.69□□□□□ -1.98
TMEM39AQ9NV64 MIR342-201ENST00000362212 99 ntBASIC2.69□□□□□ -1.98
TMEM39AQ9NV64 RNU6-424P-201ENST00000384367 105 ntBASIC2.69□□□□□ -1.98
TMEM39AQ9NV64 SNORD12C-201ENST00000386307 89 ntBASIC2.69□□□□□ -1.98
TMEM39AQ9NV64 U8.17-201ENST00000391292 132 ntBASIC2.69□□□□□ -1.98
TMEM39AQ9NV64 AL627390.1-201ENST00000396055 340 ntBASIC2.69□□□□□ -1.98
TMEM39AQ9NV64 RNA5SP89-201ENST00000410300 108 ntBASIC2.69□□□□□ -1.98
TMEM39AQ9NV64 AC015922.2-201ENST00000435593 184 ntBASIC2.69□□□□□ -1.98
TMEM39AQ9NV64 RNU6-168P-201ENST00000516189 101 ntBASIC2.69□□□□□ -1.98
TMEM39AQ9NV64 RNA5SP168-201ENST00000516642 112 ntBASIC2.69□□□□□ -1.98
TMEM39AQ9NV64 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.69□□□□□ -1.98
TMEM39AQ9NV64 MIR6873-201ENST00000622788 63 ntBASIC2.69□□□□□ -1.98
TMEM39AQ9NV64 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.69□□□□□ -1.98
TMEM39AQ9NV64 MIR450A1-201ENST00000362262 91 ntBASIC2.68□□□□□ -1.98
TMEM39AQ9NV64 VTRNA1-1-201ENST00000363120 99 ntBASIC2.68□□□□□ -1.98
TMEM39AQ9NV64 Y_RNA.198-201ENST00000364013 98 ntBASIC2.68□□□□□ -1.98
TMEM39AQ9NV64 RNU6-1107P-201ENST00000364817 104 ntBASIC2.68□□□□□ -1.98
TMEM39AQ9NV64 Y_RNA.454-201ENST00000384224 113 ntBASIC2.68□□□□□ -1.98
TMEM39AQ9NV64 HMGN2P39-201ENST00000398005 273 ntBASIC2.68□□□□□ -1.98
TMEM39AQ9NV64 RNU2-7P-201ENST00000410794 178 ntBASIC2.68□□□□□ -1.98
TMEM39AQ9NV64 SNX2P2-201ENST00000424553 323 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms