Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.56□□□□□ -2
PDLIM7Q9NR12 MIR376A2-201ENST00000636782 80 ntBASIC2.56□□□□□ -2
PDLIM7Q9NR12 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
PDLIM7Q9NR12 MTND5P18-201ENST00000445624 1801 ntBASIC2.56□□□□□ -2
PDLIM7Q9NR12 RNU6-1084P-201ENST00000362498 107 ntBASIC2.55□□□□□ -2
PDLIM7Q9NR12 Y_RNA.140-201ENST00000363474 103 ntBASIC2.55□□□□□ -2
PDLIM7Q9NR12 MIR548O-201ENST00000408583 114 ntBASIC2.55□□□□□ -2
PDLIM7Q9NR12 Y_RNA.649-201ENST00000459077 103 ntBASIC2.55□□□□□ -2
PDLIM7Q9NR12 SCARNA15-202ENST00000516881 127 ntBASIC2.55□□□□□ -2
PDLIM7Q9NR12 MIR4529-201ENST00000578110 78 ntBASIC2.55□□□□□ -2
PDLIM7Q9NR12 MIR3670-2-201ENST00000582974 65 ntBASIC2.55□□□□□ -2
PDLIM7Q9NR12 MIR3670-1-201ENST00000584160 65 ntBASIC2.55□□□□□ -2
PDLIM7Q9NR12 MIR3670-3-201ENST00000584855 65 ntBASIC2.55□□□□□ -2
PDLIM7Q9NR12 AP000942.3-201ENST00000603702 160 ntBASIC2.55□□□□□ -2
PDLIM7Q9NR12 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.55□□□□□ -2
PDLIM7Q9NR12 MIR3670-4-201ENST00000612260 65 ntBASIC2.55□□□□□ -2
PDLIM7Q9NR12 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.55□□□□□ -2
PDLIM7Q9NR12 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.55□□□□□ -2
PDLIM7Q9NR12 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.55□□□□□ -2
PDLIM7Q9NR12 SNORD14E-201ENST00000364009 85 ntBASIC2.54□□□□□ -2
PDLIM7Q9NR12 RNU6-442P-201ENST00000383968 104 ntBASIC2.54□□□□□ -2
PDLIM7Q9NR12 AC245047.3-201ENST00000429428 127 ntBASIC2.54□□□□□ -2
PDLIM7Q9NR12 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.54□□□□□ -2
PDLIM7Q9NR12 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.54□□□□□ -2
PDLIM7Q9NR12 MIR4762-201ENST00000585261 75 ntBASIC2.54□□□□□ -2
PDLIM7Q9NR12 AC010297.1-201ENST00000623948 149 ntBASIC2.54□□□□□ -2
PDLIM7Q9NR12 AC022513.1-201ENST00000624512 117 ntBASIC2.54□□□□□ -2
PDLIM7Q9NR12 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.53□□□□□ -2
PDLIM7Q9NR12 SNORA3A-201ENST00000364113 130 ntBASIC2.53□□□□□ -2
PDLIM7Q9NR12 Y_RNA.226-201ENST00000364337 114 ntBASIC2.53□□□□□ -2
PDLIM7Q9NR12 U8.5-201ENST00000364528 136 ntBASIC2.53□□□□□ -2
PDLIM7Q9NR12 Y_RNA.265-201ENST00000364677 108 ntBASIC2.53□□□□□ -2
PDLIM7Q9NR12 SNORA67.3-201ENST00000384366 140 ntBASIC2.53□□□□□ -2
PDLIM7Q9NR12 RNA5SP109-201ENST00000391010 116 ntBASIC2.53□□□□□ -2
PDLIM7Q9NR12 RNU7-25P-201ENST00000516544 62 ntBASIC2.53□□□□□ -2
PDLIM7Q9NR12 SNORD45.4-201ENST00000516629 73 ntBASIC2.53□□□□□ -2
PDLIM7Q9NR12 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.53□□□□□ -2
PDLIM7Q9NR12 AC004486.1-201ENST00000546846 233 ntBASIC2.53□□□□□ -2
PDLIM7Q9NR12 MIR3613-201ENST00000579844 87 ntBASIC2.53□□□□□ -2
PDLIM7Q9NR12 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.53□□□□□ -2
PDLIM7Q9NR12 MIR5197-201ENST00000583721 112 ntBASIC2.53□□□□□ -2
PDLIM7Q9NR12 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.53□□□□□ -2
PDLIM7Q9NR12 AC006441.5-201ENST00000612680 209 ntBASIC2.53□□□□□ -2
PDLIM7Q9NR12 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.53□□□□□ -2
PDLIM7Q9NR12 MIR6766-201ENST00000622641 72 ntBASIC2.53□□□□□ -2
PDLIM7Q9NR12 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.52□□□□□ -2.01
PDLIM7Q9NR12 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
PDLIM7Q9NR12 ICE2P2-201ENST00000483823 2787 ntBASIC2.52□□□□□ -2.01
PDLIM7Q9NR12 RNU6-268P-201ENST00000364174 107 ntBASIC2.52□□□□□ -2.01
PDLIM7Q9NR12 snoU2-30.1-201ENST00000365012 70 ntBASIC2.52□□□□□ -2.01
PDLIM7Q9NR12 DEFA7P-201ENST00000382676 285 ntBASIC2.52□□□□□ -2.01
PDLIM7Q9NR12 RNU6-147P-201ENST00000383983 107 ntBASIC2.52□□□□□ -2.01
PDLIM7Q9NR12 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.52□□□□□ -2.01
PDLIM7Q9NR12 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.52□□□□□ -2.01
PDLIM7Q9NR12 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.52□□□□□ -2.01
PDLIM7Q9NR12 RNU6-295P-201ENST00000516901 104 ntBASIC2.52□□□□□ -2.01
PDLIM7Q9NR12 AC134878.1-201ENST00000619901 243 ntBASIC2.52□□□□□ -2.01
PDLIM7Q9NR12 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.52□□□□□ -2.01
PDLIM7Q9NR12 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
PDLIM7Q9NR12 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
PDLIM7Q9NR12 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PDLIM7Q9NR12 RNU6-880P-201ENST00000384526 107 ntBASIC2.51□□□□□ -2.01
PDLIM7Q9NR12 Y_RNA.528-201ENST00000384575 108 ntBASIC2.51□□□□□ -2.01
PDLIM7Q9NR12 U8.13-201ENST00000390842 128 ntBASIC2.51□□□□□ -2.01
PDLIM7Q9NR12 RNA5SP482-201ENST00000391269 118 ntBASIC2.51□□□□□ -2.01
PDLIM7Q9NR12 SNORA11.4-201ENST00000408823 129 ntBASIC2.51□□□□□ -2.01
PDLIM7Q9NR12 SNRPGP14-201ENST00000435400 219 ntBASIC2.51□□□□□ -2.01
PDLIM7Q9NR12 RNU6-113P-201ENST00000516653 101 ntBASIC2.51□□□□□ -2.01
PDLIM7Q9NR12 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PDLIM7Q9NR12 RNU1-58P-201ENST00000362413 163 ntBASIC2.5□□□□□ -2.01
PDLIM7Q9NR12 Y_RNA.366-201ENST00000365540 102 ntBASIC2.5□□□□□ -2.01
PDLIM7Q9NR12 RNU6-1189P-201ENST00000383958 107 ntBASIC2.5□□□□□ -2.01
PDLIM7Q9NR12 RNU1-138P-201ENST00000384093 164 ntBASIC2.5□□□□□ -2.01
PDLIM7Q9NR12 Y_RNA.547-201ENST00000384654 119 ntBASIC2.5□□□□□ -2.01
PDLIM7Q9NR12 RNA5SP465-201ENST00000391195 109 ntBASIC2.5□□□□□ -2.01
PDLIM7Q9NR12 HMGN2P39-201ENST00000398005 273 ntBASIC2.5□□□□□ -2.01
PDLIM7Q9NR12 AL023284.1-201ENST00000403956 276 ntBASIC2.5□□□□□ -2.01
PDLIM7Q9NR12 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.5□□□□□ -2.01
PDLIM7Q9NR12 CALM2P4-201ENST00000430810 426 ntBASIC2.5□□□□□ -2.01
PDLIM7Q9NR12 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PDLIM7Q9NR12 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.5□□□□□ -2.01
PDLIM7Q9NR12 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.5□□□□□ -2.01
PDLIM7Q9NR12 RNU6-826P-201ENST00000516827 104 ntBASIC2.5□□□□□ -2.01
PDLIM7Q9NR12 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.5□□□□□ -2.01
PDLIM7Q9NR12 MIR4679-2-201ENST00000578358 77 ntBASIC2.5□□□□□ -2.01
PDLIM7Q9NR12 AL137067.1-201ENST00000615933 120 ntBASIC2.5□□□□□ -2.01
PDLIM7Q9NR12 MIR219B-201ENST00000637023 88 ntBASIC2.5□□□□□ -2.01
PDLIM7Q9NR12 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.5□□□□□ -2.01
PDLIM7Q9NR12 AC008555.8-201ENST00000623602 2168 ntBASIC2.5□□□□□ -2.01
PDLIM7Q9NR12 RNU6-1298P-201ENST00000362456 101 ntBASIC2.49□□□□□ -2.01
PDLIM7Q9NR12 SNORD115-28-201ENST00000363931 81 ntBASIC2.49□□□□□ -2.01
PDLIM7Q9NR12 RNU1-51P-201ENST00000365345 176 ntBASIC2.49□□□□□ -2.01
PDLIM7Q9NR12 SNORA2.2-201ENST00000365473 135 ntBASIC2.49□□□□□ -2.01
PDLIM7Q9NR12 Y_RNA.410-201ENST00000383992 113 ntBASIC2.49□□□□□ -2.01
PDLIM7Q9NR12 MIR221-201ENST00000385135 110 ntBASIC2.49□□□□□ -2.01
PDLIM7Q9NR12 SNORA26.9-201ENST00000391322 122 ntBASIC2.49□□□□□ -2.01
PDLIM7Q9NR12 RNA5SP181-201ENST00000410246 98 ntBASIC2.49□□□□□ -2.01
PDLIM7Q9NR12 BX510359.4-201ENST00000423750 193 ntBASIC2.49□□□□□ -2.01
PDLIM7Q9NR12 STAG3L5P-204ENST00000443759 179 ntBASIC2.49□□□□□ -2.01
PDLIM7Q9NR12 RNU7-193P-201ENST00000516723 65 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms