Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RNU1-40P-201ENST00000516816 164 ntBASIC2.09□□□□□ -2.07
VTA1Q9NP79 RNU1-97P-201ENST00000516872 164 ntBASIC2.09□□□□□ -2.07
VTA1Q9NP79 SNORD3E-202ENST00000627253 216 ntBASIC2.09□□□□□ -2.07
VTA1Q9NP79 AL442644.1-201ENST00000454390 3105 ntBASIC2.08□□□□□ -2.08
VTA1Q9NP79 AL161935.2-201ENST00000414627 60 ntBASIC2.08□□□□□ -2.08
VTA1Q9NP79 SNORA25.15-201ENST00000516487 89 ntBASIC2.08□□□□□ -2.08
VTA1Q9NP79 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.07□□□□□ -2.08
VTA1Q9NP79 Y_RNA.634-201ENST00000364811 113 ntBASIC2.07□□□□□ -2.08
VTA1Q9NP79 RNA5SP190-201ENST00000365222 118 ntBASIC2.07□□□□□ -2.08
VTA1Q9NP79 RNU6-209P-201ENST00000384118 107 ntBASIC2.07□□□□□ -2.08
VTA1Q9NP79 SNORD38C-201ENST00000384381 69 ntBASIC2.07□□□□□ -2.08
VTA1Q9NP79 MIR30A-201ENST00000385092 71 ntBASIC2.07□□□□□ -2.08
VTA1Q9NP79 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
VTA1Q9NP79 RNU6-239P-201ENST00000390990 99 ntBASIC2.07□□□□□ -2.08
VTA1Q9NP79 Y_RNA.622-201ENST00000411091 108 ntBASIC2.07□□□□□ -2.08
VTA1Q9NP79 RNA5SP364-201ENST00000516938 78 ntBASIC2.07□□□□□ -2.08
VTA1Q9NP79 RNU6-250P-201ENST00000516958 103 ntBASIC2.07□□□□□ -2.08
VTA1Q9NP79 MIR3198-2-201ENST00000577868 80 ntBASIC2.07□□□□□ -2.08
VTA1Q9NP79 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
VTA1Q9NP79 RNU4-84P-201ENST00000364200 139 ntBASIC2.06□□□□□ -2.08
VTA1Q9NP79 Y_RNA.337-201ENST00000365312 102 ntBASIC2.06□□□□□ -2.08
VTA1Q9NP79 SNORA17.3-201ENST00000391159 129 ntBASIC2.06□□□□□ -2.08
VTA1Q9NP79 AL627390.1-201ENST00000396055 340 ntBASIC2.06□□□□□ -2.08
VTA1Q9NP79 AC108667.1-201ENST00000428618 249 ntBASIC2.06□□□□□ -2.08
VTA1Q9NP79 RPS29P11-201ENST00000496507 171 ntBASIC2.06□□□□□ -2.08
VTA1Q9NP79 RNU6-830P-201ENST00000516353 107 ntBASIC2.06□□□□□ -2.08
VTA1Q9NP79 SNORD116-25-201ENST00000516517 92 ntBASIC2.06□□□□□ -2.08
VTA1Q9NP79 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.06□□□□□ -2.08
VTA1Q9NP79 MIR4255-201ENST00000579351 72 ntBASIC2.06□□□□□ -2.08
VTA1Q9NP79 MIR378D2-201ENST00000580636 98 ntBASIC2.06□□□□□ -2.08
VTA1Q9NP79 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.06□□□□□ -2.08
VTA1Q9NP79 AC103810.8-201ENST00000607347 118 ntBASIC2.06□□□□□ -2.08
VTA1Q9NP79 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
VTA1Q9NP79 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.05□□□□□ -2.08
VTA1Q9NP79 SNORD33-201ENST00000362761 85 ntBASIC2.05□□□□□ -2.08
VTA1Q9NP79 Y_RNA.150-201ENST00000363562 102 ntBASIC2.05□□□□□ -2.08
VTA1Q9NP79 Y_RNA.338-201ENST00000365320 114 ntBASIC2.05□□□□□ -2.08
VTA1Q9NP79 Y_RNA.486-201ENST00000384398 107 ntBASIC2.05□□□□□ -2.08
VTA1Q9NP79 SNORD72-201ENST00000390994 80 ntBASIC2.05□□□□□ -2.08
VTA1Q9NP79 PCNPP3-201ENST00000393579 471 ntBASIC2.05□□□□□ -2.08
VTA1Q9NP79 SNRPGP14-201ENST00000435400 219 ntBASIC2.05□□□□□ -2.08
VTA1Q9NP79 SNRPGP13-201ENST00000442212 177 ntBASIC2.05□□□□□ -2.08
VTA1Q9NP79 RNU6-1212P-201ENST00000517023 104 ntBASIC2.05□□□□□ -2.08
VTA1Q9NP79 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VTA1Q9NP79 RNU6-268P-201ENST00000364174 107 ntBASIC2.04□□□□□ -2.08
VTA1Q9NP79 SEPT7P4-201ENST00000437076 306 ntBASIC2.04□□□□□ -2.08
VTA1Q9NP79 SNORD13-201ENST00000459299 104 ntBASIC2.04□□□□□ -2.08
VTA1Q9NP79 RNU6-561P-201ENST00000516222 102 ntBASIC2.04□□□□□ -2.08
VTA1Q9NP79 RNU7-121P-201ENST00000516604 62 ntBASIC2.04□□□□□ -2.08
VTA1Q9NP79 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
VTA1Q9NP79 RNU6-199P-201ENST00000362954 107 ntBASIC2.03□□□□□ -2.08
VTA1Q9NP79 RNU6-597P-201ENST00000365620 102 ntBASIC2.03□□□□□ -2.08
VTA1Q9NP79 RNU6-203P-201ENST00000384038 104 ntBASIC2.03□□□□□ -2.08
VTA1Q9NP79 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
VTA1Q9NP79 Y_RNA.580-201ENST00000391004 95 ntBASIC2.03□□□□□ -2.08
VTA1Q9NP79 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.03□□□□□ -2.08
VTA1Q9NP79 Y_RNA.676-201ENST00000516393 96 ntBASIC2.03□□□□□ -2.08
VTA1Q9NP79 AC090142.3-201ENST00000519012 385 ntBASIC2.03□□□□□ -2.08
VTA1Q9NP79 MIR4498-201ENST00000577599 66 ntBASIC2.03□□□□□ -2.08
VTA1Q9NP79 SNORA77B-201ENST00000578179 125 ntBASIC2.03□□□□□ -2.08
VTA1Q9NP79 MIR3646-201ENST00000578301 84 ntBASIC2.03□□□□□ -2.08
VTA1Q9NP79 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.03□□□□□ -2.08
VTA1Q9NP79 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
VTA1Q9NP79 RNU6-888P-201ENST00000363010 101 ntBASIC2.02□□□□□ -2.09
VTA1Q9NP79 SNORA2.2-201ENST00000365473 135 ntBASIC2.02□□□□□ -2.09
VTA1Q9NP79 Y_RNA.542-201ENST00000384641 111 ntBASIC2.02□□□□□ -2.09
VTA1Q9NP79 MT-TR-201ENST00000387439 65 ntBASIC2.02□□□□□ -2.09
VTA1Q9NP79 RNU6-394P-201ENST00000410735 107 ntBASIC2.02□□□□□ -2.09
VTA1Q9NP79 RN7SKP51-201ENST00000410781 304 ntBASIC2.02□□□□□ -2.09
VTA1Q9NP79 MIR3935-201ENST00000583472 104 ntBASIC2.02□□□□□ -2.09
VTA1Q9NP79 AC012493.3-201ENST00000604494 112 ntBASIC2.02□□□□□ -2.09
VTA1Q9NP79 MIR8081-201ENST00000611533 95 ntBASIC2.02□□□□□ -2.09
VTA1Q9NP79 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.02□□□□□ -2.09
VTA1Q9NP79 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
VTA1Q9NP79 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.02□□□□□ -2.09
VTA1Q9NP79 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
VTA1Q9NP79 RNU6-457P-201ENST00000363999 107 ntBASIC2.01□□□□□ -2.09
VTA1Q9NP79 Y_RNA.272-201ENST00000364696 102 ntBASIC2.01□□□□□ -2.09
VTA1Q9NP79 MIR136-201ENST00000385207 82 ntBASIC2.01□□□□□ -2.09
VTA1Q9NP79 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
VTA1Q9NP79 AC006461.1-201ENST00000412637 326 ntBASIC2.01□□□□□ -2.09
VTA1Q9NP79 AC015922.2-201ENST00000435593 184 ntBASIC2.01□□□□□ -2.09
VTA1Q9NP79 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.01□□□□□ -2.09
VTA1Q9NP79 snoU13.9-201ENST00000458927 103 ntBASIC2.01□□□□□ -2.09
VTA1Q9NP79 RNU6-1116P-201ENST00000517269 99 ntBASIC2.01□□□□□ -2.09
VTA1Q9NP79 MTND1P7-201ENST00000632801 297 ntBASIC2.01□□□□□ -2.09
VTA1Q9NP79 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VTA1Q9NP79 Y_RNA.66-201ENST00000362862 102 ntBASIC2□□□□□ -2.09
VTA1Q9NP79 AC108729.3-201ENST00000513484 108 ntBASIC2□□□□□ -2.09
VTA1Q9NP79 RNU6-322P-201ENST00000516010 103 ntBASIC2□□□□□ -2.09
VTA1Q9NP79 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.99□□□□□ -2.09
VTA1Q9NP79 SNORA25.7-201ENST00000364375 127 ntBASIC1.99□□□□□ -2.09
VTA1Q9NP79 SNORA16.1-201ENST00000364597 132 ntBASIC1.99□□□□□ -2.09
VTA1Q9NP79 Y_RNA.393-201ENST00000383936 102 ntBASIC1.99□□□□□ -2.09
VTA1Q9NP79 Y_RNA.521-201ENST00000384560 114 ntBASIC1.99□□□□□ -2.09
VTA1Q9NP79 MIR513A1-201ENST00000385138 129 ntBASIC1.99□□□□□ -2.09
VTA1Q9NP79 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.99□□□□□ -2.09
VTA1Q9NP79 SNORA67.5-201ENST00000391036 107 ntBASIC1.99□□□□□ -2.09
VTA1Q9NP79 RNU5E-9P-201ENST00000411164 104 ntBASIC1.99□□□□□ -2.09
VTA1Q9NP79 HMGN2P19-201ENST00000425149 265 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms