Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 AC087499.4-201ENST00000448505 178 ntBASIC2.89□□□□□ -1.95
ZFYVE28Q9HCC9 AC114811.1-201ENST00000507207 168 ntBASIC2.89□□□□□ -1.95
ZFYVE28Q9HCC9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ZFYVE28Q9HCC9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ZFYVE28Q9HCC9 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ZFYVE28Q9HCC9 SNORD114-1-201ENST00000362705 72 ntBASIC2.88□□□□□ -1.95
ZFYVE28Q9HCC9 RNA5SP99-201ENST00000364020 114 ntBASIC2.88□□□□□ -1.95
ZFYVE28Q9HCC9 Y_RNA.366-201ENST00000365540 102 ntBASIC2.88□□□□□ -1.95
ZFYVE28Q9HCC9 RNU6-950P-201ENST00000384651 107 ntBASIC2.88□□□□□ -1.95
ZFYVE28Q9HCC9 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
ZFYVE28Q9HCC9 HMGN2P35-201ENST00000412164 270 ntBASIC2.88□□□□□ -1.95
ZFYVE28Q9HCC9 CALM2P4-201ENST00000430810 426 ntBASIC2.88□□□□□ -1.95
ZFYVE28Q9HCC9 AC015726.2-201ENST00000620112 122 ntBASIC2.88□□□□□ -1.95
ZFYVE28Q9HCC9 ZNF720P1-201ENST00000562403 1939 ntBASIC2.87□□□□□ -1.95
ZFYVE28Q9HCC9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
ZFYVE28Q9HCC9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.87□□□□□ -1.95
ZFYVE28Q9HCC9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
ZFYVE28Q9HCC9 AL034345.1-201ENST00000407768 123 ntBASIC2.87□□□□□ -1.95
ZFYVE28Q9HCC9 SNORD88.1-201ENST00000408684 91 ntBASIC2.87□□□□□ -1.95
ZFYVE28Q9HCC9 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.87□□□□□ -1.95
ZFYVE28Q9HCC9 RNU6-240P-201ENST00000516098 97 ntBASIC2.87□□□□□ -1.95
ZFYVE28Q9HCC9 RNA5SP281-201ENST00000516504 135 ntBASIC2.87□□□□□ -1.95
ZFYVE28Q9HCC9 SNORA18.7-201ENST00000516910 131 ntBASIC2.87□□□□□ -1.95
ZFYVE28Q9HCC9 AC027279.3-201ENST00000625055 122 ntBASIC2.87□□□□□ -1.95
ZFYVE28Q9HCC9 MAPK10-266ENST00000641066 6555 ntBASIC2.87□□□□□ -1.95
ZFYVE28Q9HCC9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
ZFYVE28Q9HCC9 MIR597-201ENST00000384968 97 ntBASIC2.86□□□□□ -1.95
ZFYVE28Q9HCC9 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.86□□□□□ -1.95
ZFYVE28Q9HCC9 COX6CP6-201ENST00000490840 228 ntBASIC2.86□□□□□ -1.95
ZFYVE28Q9HCC9 RNU6-412P-201ENST00000516434 106 ntBASIC2.86□□□□□ -1.95
ZFYVE28Q9HCC9 SNORA31.10-201ENST00000516482 106 ntBASIC2.86□□□□□ -1.95
ZFYVE28Q9HCC9 SNORD36C-201ENST00000516733 66 ntBASIC2.86□□□□□ -1.95
ZFYVE28Q9HCC9 AP003484.1-201ENST00000530974 250 ntBASIC2.86□□□□□ -1.95
ZFYVE28Q9HCC9 MIR4679-2-201ENST00000578358 77 ntBASIC2.86□□□□□ -1.95
ZFYVE28Q9HCC9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
ZFYVE28Q9HCC9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
ZFYVE28Q9HCC9 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
ZFYVE28Q9HCC9 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
ZFYVE28Q9HCC9 RNU1-133P-201ENST00000364867 167 ntBASIC2.85□□□□□ -1.95
ZFYVE28Q9HCC9 RNU6-690P-201ENST00000365242 106 ntBASIC2.85□□□□□ -1.95
ZFYVE28Q9HCC9 Y_RNA.440-201ENST00000384120 114 ntBASIC2.85□□□□□ -1.95
ZFYVE28Q9HCC9 SUMO1P4-201ENST00000429430 302 ntBASIC2.85□□□□□ -1.95
ZFYVE28Q9HCC9 RPS12P2-201ENST00000439728 269 ntBASIC2.85□□□□□ -1.95
ZFYVE28Q9HCC9 RNU7-80P-201ENST00000459562 61 ntBASIC2.85□□□□□ -1.95
ZFYVE28Q9HCC9 RNU6-1116P-201ENST00000517269 99 ntBASIC2.85□□□□□ -1.95
ZFYVE28Q9HCC9 MIR3613-201ENST00000579844 87 ntBASIC2.85□□□□□ -1.95
ZFYVE28Q9HCC9 AL353997.5-201ENST00000618886 171 ntBASIC2.85□□□□□ -1.95
ZFYVE28Q9HCC9 AC008555.8-201ENST00000623602 2168 ntBASIC2.85□□□□□ -1.95
ZFYVE28Q9HCC9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
ZFYVE28Q9HCC9 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
ZFYVE28Q9HCC9 Y_RNA.351-201ENST00000365436 96 ntBASIC2.84□□□□□ -1.95
ZFYVE28Q9HCC9 RNU6-147P-201ENST00000383983 107 ntBASIC2.84□□□□□ -1.95
ZFYVE28Q9HCC9 MIR570-201ENST00000384917 97 ntBASIC2.84□□□□□ -1.95
ZFYVE28Q9HCC9 RNA5SP465-201ENST00000391195 109 ntBASIC2.84□□□□□ -1.95
ZFYVE28Q9HCC9 RNU6-938P-201ENST00000411285 103 ntBASIC2.84□□□□□ -1.95
ZFYVE28Q9HCC9 MIR4778-201ENST00000577635 80 ntBASIC2.84□□□□□ -1.95
ZFYVE28Q9HCC9 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.84□□□□□ -1.95
ZFYVE28Q9HCC9 MIRLET7C-201ENST00000362160 84 ntBASIC2.83□□□□□ -1.96
ZFYVE28Q9HCC9 Y_RNA.454-201ENST00000384224 113 ntBASIC2.83□□□□□ -1.96
ZFYVE28Q9HCC9 AL627390.1-201ENST00000396055 340 ntBASIC2.83□□□□□ -1.96
ZFYVE28Q9HCC9 RNA5SP458-201ENST00000516188 119 ntBASIC2.83□□□□□ -1.96
ZFYVE28Q9HCC9 AC007012.1-201ENST00000567192 175 ntBASIC2.83□□□□□ -1.96
ZFYVE28Q9HCC9 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
ZFYVE28Q9HCC9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.82□□□□□ -1.96
ZFYVE28Q9HCC9 SNORA63D-201ENST00000364359 132 ntBASIC2.82□□□□□ -1.96
ZFYVE28Q9HCC9 RNU6-424P-201ENST00000384367 105 ntBASIC2.82□□□□□ -1.96
ZFYVE28Q9HCC9 MIR518A2-201ENST00000384966 87 ntBASIC2.82□□□□□ -1.96
ZFYVE28Q9HCC9 MIR759-201ENST00000390224 91 ntBASIC2.82□□□□□ -1.96
ZFYVE28Q9HCC9 AL590004.2-201ENST00000404787 371 ntBASIC2.82□□□□□ -1.96
ZFYVE28Q9HCC9 MIR1283-2-201ENST00000408621 87 ntBASIC2.82□□□□□ -1.96
ZFYVE28Q9HCC9 AC046143.2-201ENST00000609789 160 ntBASIC2.82□□□□□ -1.96
ZFYVE28Q9HCC9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.82□□□□□ -1.96
ZFYVE28Q9HCC9 MIR6873-201ENST00000622788 63 ntBASIC2.82□□□□□ -1.96
ZFYVE28Q9HCC9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.82□□□□□ -1.96
ZFYVE28Q9HCC9 RNU6-349P-201ENST00000362402 107 ntBASIC2.81□□□□□ -1.96
ZFYVE28Q9HCC9 VTRNA1-1-201ENST00000363120 99 ntBASIC2.81□□□□□ -1.96
ZFYVE28Q9HCC9 RNY1P6-201ENST00000384193 109 ntBASIC2.81□□□□□ -1.96
ZFYVE28Q9HCC9 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.81□□□□□ -1.96
ZFYVE28Q9HCC9 RNU6-830P-201ENST00000516353 107 ntBASIC2.81□□□□□ -1.96
ZFYVE28Q9HCC9 MIR4658-201ENST00000584344 65 ntBASIC2.81□□□□□ -1.96
ZFYVE28Q9HCC9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.81□□□□□ -1.96
ZFYVE28Q9HCC9 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
ZFYVE28Q9HCC9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.81□□□□□ -1.96
ZFYVE28Q9HCC9 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
ZFYVE28Q9HCC9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
ZFYVE28Q9HCC9 RNU6-833P-201ENST00000363486 107 ntBASIC2.8□□□□□ -1.96
ZFYVE28Q9HCC9 Y_RNA.198-201ENST00000364013 98 ntBASIC2.8□□□□□ -1.96
ZFYVE28Q9HCC9 Y_RNA.281-201ENST00000364774 94 ntBASIC2.8□□□□□ -1.96
ZFYVE28Q9HCC9 U8.16-201ENST00000391279 133 ntBASIC2.8□□□□□ -1.96
ZFYVE28Q9HCC9 RNU2-7P-201ENST00000410794 178 ntBASIC2.8□□□□□ -1.96
ZFYVE28Q9HCC9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.8□□□□□ -1.96
ZFYVE28Q9HCC9 AC015922.2-201ENST00000435593 184 ntBASIC2.8□□□□□ -1.96
ZFYVE28Q9HCC9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.8□□□□□ -1.96
ZFYVE28Q9HCC9 HSPE1P9-201ENST00000440046 311 ntBASIC2.8□□□□□ -1.96
ZFYVE28Q9HCC9 RNA5SP168-201ENST00000516642 112 ntBASIC2.8□□□□□ -1.96
ZFYVE28Q9HCC9 AC103810.6-201ENST00000606708 136 ntBASIC2.8□□□□□ -1.96
ZFYVE28Q9HCC9 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.8□□□□□ -1.96
ZFYVE28Q9HCC9 MIR203B-201ENST00000636080 86 ntBASIC2.8□□□□□ -1.96
ZFYVE28Q9HCC9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
ZFYVE28Q9HCC9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms