Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AL590808.1-201ENST00000618696 141 ntBASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
SSBP3Q9BWW4 RNU6-862P-201ENST00000362804 105 ntBASIC2.27□□□□□ -2.05
SSBP3Q9BWW4 Y_RNA.342-201ENST00000365352 113 ntBASIC2.27□□□□□ -2.05
SSBP3Q9BWW4 Y_RNA.500-201ENST00000384466 111 ntBASIC2.27□□□□□ -2.05
SSBP3Q9BWW4 RN7SKP200-201ENST00000410564 320 ntBASIC2.27□□□□□ -2.05
SSBP3Q9BWW4 AC003982.1-202ENST00000469928 248 ntBASIC2.27□□□□□ -2.05
SSBP3Q9BWW4 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.27□□□□□ -2.05
SSBP3Q9BWW4 SNORA9.3-201ENST00000516383 129 ntBASIC2.27□□□□□ -2.05
SSBP3Q9BWW4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SSBP3Q9BWW4 AC079600.2-201ENST00000550076 130 ntBASIC2.27□□□□□ -2.05
SSBP3Q9BWW4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.27□□□□□ -2.05
SSBP3Q9BWW4 MIR3605-201ENST00000583214 100 ntBASIC2.27□□□□□ -2.05
SSBP3Q9BWW4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SSBP3Q9BWW4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.26□□□□□ -2.05
SSBP3Q9BWW4 MIR494-201ENST00000349529 81 ntBASIC2.26□□□□□ -2.05
SSBP3Q9BWW4 AC062016.1-201ENST00000355719 319 ntBASIC2.26□□□□□ -2.05
SSBP3Q9BWW4 RNU1-112P-201ENST00000364401 164 ntBASIC2.26□□□□□ -2.05
SSBP3Q9BWW4 RNU4-16P-201ENST00000364737 141 ntBASIC2.26□□□□□ -2.05
SSBP3Q9BWW4 MIR196B-201ENST00000384852 84 ntBASIC2.26□□□□□ -2.05
SSBP3Q9BWW4 RNU6-220P-201ENST00000390919 107 ntBASIC2.26□□□□□ -2.05
SSBP3Q9BWW4 Y_RNA.601-201ENST00000410500 113 ntBASIC2.26□□□□□ -2.05
SSBP3Q9BWW4 AL022718.1-201ENST00000412004 84 ntBASIC2.26□□□□□ -2.05
SSBP3Q9BWW4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.26□□□□□ -2.05
SSBP3Q9BWW4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.26□□□□□ -2.05
SSBP3Q9BWW4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.26□□□□□ -2.05
SSBP3Q9BWW4 RPS29P6-201ENST00000438196 145 ntBASIC2.26□□□□□ -2.05
SSBP3Q9BWW4 UBE2DNL-203ENST00000474922 222 ntBASIC2.26□□□□□ -2.05
SSBP3Q9BWW4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.26□□□□□ -2.05
SSBP3Q9BWW4 Y_RNA.685-201ENST00000516532 108 ntBASIC2.26□□□□□ -2.05
SSBP3Q9BWW4 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.26□□□□□ -2.05
SSBP3Q9BWW4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.26□□□□□ -2.05
SSBP3Q9BWW4 RPL12P50-201ENST00000603116 116 ntBASIC2.26□□□□□ -2.05
SSBP3Q9BWW4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SSBP3Q9BWW4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SSBP3Q9BWW4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
SSBP3Q9BWW4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.25□□□□□ -2.05
SSBP3Q9BWW4 SNORA27-201ENST00000384323 126 ntBASIC2.25□□□□□ -2.05
SSBP3Q9BWW4 SNORA11.4-201ENST00000408823 129 ntBASIC2.25□□□□□ -2.05
SSBP3Q9BWW4 Z96811.1-201ENST00000445880 108 ntBASIC2.25□□□□□ -2.05
SSBP3Q9BWW4 HSPE1P19-201ENST00000603327 295 ntBASIC2.25□□□□□ -2.05
SSBP3Q9BWW4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
SSBP3Q9BWW4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
SSBP3Q9BWW4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
SSBP3Q9BWW4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.24□□□□□ -2.05
SSBP3Q9BWW4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SSBP3Q9BWW4 RNU6-1099P-201ENST00000363533 107 ntBASIC2.24□□□□□ -2.05
SSBP3Q9BWW4 Y_RNA.155-201ENST00000363632 101 ntBASIC2.24□□□□□ -2.05
SSBP3Q9BWW4 SNORD56.5-201ENST00000364281 72 ntBASIC2.24□□□□□ -2.05
SSBP3Q9BWW4 Y_RNA.241-201ENST00000364470 117 ntBASIC2.24□□□□□ -2.05
SSBP3Q9BWW4 RNU6-424P-201ENST00000384367 105 ntBASIC2.24□□□□□ -2.05
SSBP3Q9BWW4 RNU6-163P-201ENST00000384396 106 ntBASIC2.24□□□□□ -2.05
SSBP3Q9BWW4 RNU6-1152P-201ENST00000384576 107 ntBASIC2.24□□□□□ -2.05
SSBP3Q9BWW4 Y_RNA.531-201ENST00000384589 121 ntBASIC2.24□□□□□ -2.05
SSBP3Q9BWW4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
SSBP3Q9BWW4 RNU6-592P-201ENST00000411333 103 ntBASIC2.24□□□□□ -2.05
SSBP3Q9BWW4 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.24□□□□□ -2.05
SSBP3Q9BWW4 AC109327.2-201ENST00000448339 378 ntBASIC2.24□□□□□ -2.05
SSBP3Q9BWW4 RNU6-893P-201ENST00000458841 100 ntBASIC2.24□□□□□ -2.05
SSBP3Q9BWW4 MIR3162-201ENST00000581818 82 ntBASIC2.24□□□□□ -2.05
SSBP3Q9BWW4 MIR3616-201ENST00000584070 92 ntBASIC2.24□□□□□ -2.05
SSBP3Q9BWW4 SNORA28-201ENST00000606769 126 ntBASIC2.24□□□□□ -2.05
SSBP3Q9BWW4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.23□□□□□ -2.05
SSBP3Q9BWW4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SSBP3Q9BWW4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.23□□□□□ -2.05
SSBP3Q9BWW4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SSBP3Q9BWW4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.23□□□□□ -2.05
SSBP3Q9BWW4 RNU6-661P-201ENST00000362409 107 ntBASIC2.23□□□□□ -2.05
SSBP3Q9BWW4 SNORA4.2-201ENST00000365313 147 ntBASIC2.23□□□□□ -2.05
SSBP3Q9BWW4 Y_RNA.466-201ENST00000384294 113 ntBASIC2.23□□□□□ -2.05
SSBP3Q9BWW4 HMGN2P35-201ENST00000412164 270 ntBASIC2.23□□□□□ -2.05
SSBP3Q9BWW4 RNU7-96P-201ENST00000459535 64 ntBASIC2.23□□□□□ -2.05
SSBP3Q9BWW4 AC113410.1-201ENST00000505029 247 ntBASIC2.23□□□□□ -2.05
SSBP3Q9BWW4 AC114811.1-201ENST00000507207 168 ntBASIC2.23□□□□□ -2.05
SSBP3Q9BWW4 AC002984.1-201ENST00000591692 448 ntBASIC2.23□□□□□ -2.05
SSBP3Q9BWW4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SSBP3Q9BWW4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
SSBP3Q9BWW4 RNA5SP493-201ENST00000364115 91 ntBASIC2.22□□□□□ -2.05
SSBP3Q9BWW4 Y_RNA.219-201ENST00000364232 113 ntBASIC2.22□□□□□ -2.05
SSBP3Q9BWW4 Y_RNA.299-201ENST00000364973 94 ntBASIC2.22□□□□□ -2.05
SSBP3Q9BWW4 RNU6-409P-201ENST00000384114 104 ntBASIC2.22□□□□□ -2.05
SSBP3Q9BWW4 MIR1262-201ENST00000408276 93 ntBASIC2.22□□□□□ -2.05
SSBP3Q9BWW4 RNU6-733P-201ENST00000410759 104 ntBASIC2.22□□□□□ -2.05
SSBP3Q9BWW4 RNA5SP144-201ENST00000410846 116 ntBASIC2.22□□□□□ -2.05
SSBP3Q9BWW4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.22□□□□□ -2.05
SSBP3Q9BWW4 RPS23P4-201ENST00000487908 423 ntBASIC2.22□□□□□ -2.05
SSBP3Q9BWW4 AC004812.1-201ENST00000540773 146 ntBASIC2.22□□□□□ -2.05
SSBP3Q9BWW4 MIR4694-201ENST00000578534 80 ntBASIC2.22□□□□□ -2.05
SSBP3Q9BWW4 MIR4672-201ENST00000583126 81 ntBASIC2.22□□□□□ -2.05
SSBP3Q9BWW4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.22□□□□□ -2.05
SSBP3Q9BWW4 AC087741.2-201ENST00000619415 172 ntBASIC2.22□□□□□ -2.05
SSBP3Q9BWW4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
SSBP3Q9BWW4 RNU6-363P-201ENST00000362895 105 ntBASIC2.21□□□□□ -2.06
SSBP3Q9BWW4 SNORD115-19-201ENST00000363098 82 ntBASIC2.21□□□□□ -2.06
SSBP3Q9BWW4 RNU6-23P-201ENST00000363283 107 ntBASIC2.21□□□□□ -2.06
SSBP3Q9BWW4 SNORD115-18-201ENST00000363293 82 ntBASIC2.21□□□□□ -2.06
SSBP3Q9BWW4 SNORA25.6-201ENST00000364121 118 ntBASIC2.21□□□□□ -2.06
SSBP3Q9BWW4 SNORD115-17-201ENST00000364612 82 ntBASIC2.21□□□□□ -2.06
SSBP3Q9BWW4 MIR627-201ENST00000384979 97 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 197.6 ms