Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 SNORA6-201ENST00000384033 151 ntBASIC2.07□□□□□ -2.08
PNKPQ96T60 Y_RNA.420-201ENST00000384043 110 ntBASIC2.07□□□□□ -2.08
PNKPQ96T60 MIR583-201ENST00000384846 75 ntBASIC2.07□□□□□ -2.08
PNKPQ96T60 MIR524-201ENST00000385242 87 ntBASIC2.07□□□□□ -2.08
PNKPQ96T60 Y_RNA.586-201ENST00000391146 98 ntBASIC2.07□□□□□ -2.08
PNKPQ96T60 AC069257.2-201ENST00000441819 155 ntBASIC2.07□□□□□ -2.08
PNKPQ96T60 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.07□□□□□ -2.08
PNKPQ96T60 RNA5SP182-201ENST00000516064 82 ntBASIC2.07□□□□□ -2.08
PNKPQ96T60 RNU7-28P-201ENST00000516759 62 ntBASIC2.07□□□□□ -2.08
PNKPQ96T60 RNA5SP437-201ENST00000517249 129 ntBASIC2.07□□□□□ -2.08
PNKPQ96T60 RNU6-1116P-201ENST00000517269 99 ntBASIC2.07□□□□□ -2.08
PNKPQ96T60 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
PNKPQ96T60 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
PNKPQ96T60 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
PNKPQ96T60 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
PNKPQ96T60 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
PNKPQ96T60 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
PNKPQ96T60 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
PNKPQ96T60 RNU6-112P-201ENST00000363599 104 ntBASIC2.06□□□□□ -2.08
PNKPQ96T60 SNORA25.7-201ENST00000364375 127 ntBASIC2.06□□□□□ -2.08
PNKPQ96T60 Y_RNA.251-201ENST00000364551 99 ntBASIC2.06□□□□□ -2.08
PNKPQ96T60 SNORD61-201ENST00000384252 73 ntBASIC2.06□□□□□ -2.08
PNKPQ96T60 RNU2-7P-201ENST00000410794 178 ntBASIC2.06□□□□□ -2.08
PNKPQ96T60 SNORD45.4-201ENST00000516629 73 ntBASIC2.06□□□□□ -2.08
PNKPQ96T60 RNU6-126P-201ENST00000516685 103 ntBASIC2.06□□□□□ -2.08
PNKPQ96T60 RNU6-1270P-201ENST00000517128 108 ntBASIC2.06□□□□□ -2.08
PNKPQ96T60 AC087685.1-201ENST00000587507 141 ntBASIC2.06□□□□□ -2.08
PNKPQ96T60 AC012493.3-201ENST00000604494 112 ntBASIC2.06□□□□□ -2.08
PNKPQ96T60 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
PNKPQ96T60 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
PNKPQ96T60 SNORA1-201ENST00000384107 130 ntBASIC2.05□□□□□ -2.08
PNKPQ96T60 RNU6-296P-201ENST00000384608 107 ntBASIC2.05□□□□□ -2.08
PNKPQ96T60 Y_RNA.542-201ENST00000384641 111 ntBASIC2.05□□□□□ -2.08
PNKPQ96T60 MIR520A-201ENST00000384862 85 ntBASIC2.05□□□□□ -2.08
PNKPQ96T60 MIR802-201ENST00000390235 94 ntBASIC2.05□□□□□ -2.08
PNKPQ96T60 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PNKPQ96T60 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PNKPQ96T60 RN7SKP200-201ENST00000410564 320 ntBASIC2.05□□□□□ -2.08
PNKPQ96T60 MTND4LP9-201ENST00000427694 174 ntBASIC2.05□□□□□ -2.08
PNKPQ96T60 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.05□□□□□ -2.08
PNKPQ96T60 RPL23AP63-201ENST00000498752 471 ntBASIC2.05□□□□□ -2.08
PNKPQ96T60 RNU6-504P-201ENST00000516568 104 ntBASIC2.05□□□□□ -2.08
PNKPQ96T60 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.05□□□□□ -2.08
PNKPQ96T60 AC007751.1-201ENST00000529260 376 ntBASIC2.05□□□□□ -2.08
PNKPQ96T60 MIR4529-201ENST00000578110 78 ntBASIC2.05□□□□□ -2.08
PNKPQ96T60 MIR6845-201ENST00000613182 61 ntBASIC2.05□□□□□ -2.08
PNKPQ96T60 MIRLET7C-201ENST00000362160 84 ntBASIC2.04□□□□□ -2.08
PNKPQ96T60 snoU2-30.1-201ENST00000365012 70 ntBASIC2.04□□□□□ -2.08
PNKPQ96T60 SNORD113-1-201ENST00000365321 69 ntBASIC2.04□□□□□ -2.08
PNKPQ96T60 SNORA40-201ENST00000388090 126 ntBASIC2.04□□□□□ -2.08
PNKPQ96T60 RNU2-40P-201ENST00000410833 196 ntBASIC2.04□□□□□ -2.08
PNKPQ96T60 RNU6-693P-201ENST00000516134 107 ntBASIC2.04□□□□□ -2.08
PNKPQ96T60 MIR514B-201ENST00000516774 80 ntBASIC2.04□□□□□ -2.08
PNKPQ96T60 AC090142.3-201ENST00000519012 385 ntBASIC2.04□□□□□ -2.08
PNKPQ96T60 SNORA28-201ENST00000606769 126 ntBASIC2.04□□□□□ -2.08
PNKPQ96T60 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
PNKPQ96T60 SNORD14E-201ENST00000364009 85 ntBASIC2.03□□□□□ -2.08
PNKPQ96T60 RNU6-442P-201ENST00000383968 104 ntBASIC2.03□□□□□ -2.08
PNKPQ96T60 MIR548A2-201ENST00000384956 97 ntBASIC2.03□□□□□ -2.08
PNKPQ96T60 SNORA40.18-201ENST00000391200 128 ntBASIC2.03□□□□□ -2.08
PNKPQ96T60 RNA5SP100-201ENST00000410903 110 ntBASIC2.03□□□□□ -2.08
PNKPQ96T60 RNA5SP59-201ENST00000410922 110 ntBASIC2.03□□□□□ -2.08
PNKPQ96T60 CALM2P4-201ENST00000430810 426 ntBASIC2.03□□□□□ -2.08
PNKPQ96T60 AC114811.1-201ENST00000507207 168 ntBASIC2.03□□□□□ -2.08
PNKPQ96T60 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.03□□□□□ -2.08
PNKPQ96T60 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.03□□□□□ -2.08
PNKPQ96T60 MIR3129-201ENST00000581095 76 ntBASIC2.03□□□□□ -2.08
PNKPQ96T60 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.03□□□□□ -2.08
PNKPQ96T60 U1.36-201ENST00000620684 176 ntBASIC2.03□□□□□ -2.08
PNKPQ96T60 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.03□□□□□ -2.08
PNKPQ96T60 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.03□□□□□ -2.08
PNKPQ96T60 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.03□□□□□ -2.08
PNKPQ96T60 RNU6-888P-201ENST00000363010 101 ntBASIC2.02□□□□□ -2.09
PNKPQ96T60 RNU6-268P-201ENST00000364174 107 ntBASIC2.02□□□□□ -2.09
PNKPQ96T60 RNU6-163P-201ENST00000384396 106 ntBASIC2.02□□□□□ -2.09
PNKPQ96T60 RNU6-1031P-201ENST00000384773 107 ntBASIC2.02□□□□□ -2.09
PNKPQ96T60 Y_RNA.584-201ENST00000391090 114 ntBASIC2.02□□□□□ -2.09
PNKPQ96T60 U8.16-201ENST00000391279 133 ntBASIC2.02□□□□□ -2.09
PNKPQ96T60 AL034345.1-201ENST00000407768 123 ntBASIC2.02□□□□□ -2.09
PNKPQ96T60 AL445685.2-201ENST00000422551 342 ntBASIC2.02□□□□□ -2.09
PNKPQ96T60 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.02□□□□□ -2.09
PNKPQ96T60 SNRPGP14-201ENST00000435400 219 ntBASIC2.02□□□□□ -2.09
PNKPQ96T60 SNRPGP13-201ENST00000442212 177 ntBASIC2.02□□□□□ -2.09
PNKPQ96T60 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.02□□□□□ -2.09
PNKPQ96T60 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.02□□□□□ -2.09
PNKPQ96T60 SNORD24-201ENST00000383884 75 ntBASIC2.01□□□□□ -2.09
PNKPQ96T60 RNU6-959P-201ENST00000384671 107 ntBASIC2.01□□□□□ -2.09
PNKPQ96T60 SNORD23.1-201ENST00000408212 104 ntBASIC2.01□□□□□ -2.09
PNKPQ96T60 AL603825.1-201ENST00000438481 80 ntBASIC2.01□□□□□ -2.09
PNKPQ96T60 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.01□□□□□ -2.09
PNKPQ96T60 AC055731.1-201ENST00000474387 401 ntBASIC2.01□□□□□ -2.09
PNKPQ96T60 SNORA18.4-201ENST00000516440 124 ntBASIC2.01□□□□□ -2.09
PNKPQ96T60 RNA5SP168-201ENST00000516642 112 ntBASIC2.01□□□□□ -2.09
PNKPQ96T60 RNU6-971P-201ENST00000516920 106 ntBASIC2.01□□□□□ -2.09
PNKPQ96T60 RNU2-19P-201ENST00000517288 84 ntBASIC2.01□□□□□ -2.09
PNKPQ96T60 AL365205.2-201ENST00000594586 68 ntBASIC2.01□□□□□ -2.09
PNKPQ96T60 AC006441.5-201ENST00000612680 209 ntBASIC2.01□□□□□ -2.09
PNKPQ96T60 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
PNKPQ96T60 RNA5SP276-201ENST00000362580 94 ntBASIC2□□□□□ -2.09
PNKPQ96T60 U8.1-201ENST00000362843 134 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 200.2 ms