Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 MIR342-201ENST00000362212 99 ntBASIC2.89□□□□□ -1.95
SYNGAP1Q96PV0 RNU6-414P-201ENST00000363705 104 ntBASIC2.89□□□□□ -1.95
SYNGAP1Q96PV0 RNU6-756P-201ENST00000383997 107 ntBASIC2.89□□□□□ -1.95
SYNGAP1Q96PV0 MIR515-2-201ENST00000384883 83 ntBASIC2.89□□□□□ -1.95
SYNGAP1Q96PV0 MIR515-1-201ENST00000384884 83 ntBASIC2.89□□□□□ -1.95
SYNGAP1Q96PV0 U8.17-201ENST00000391292 132 ntBASIC2.89□□□□□ -1.95
SYNGAP1Q96PV0 MIR1302-5-201ENST00000408164 150 ntBASIC2.89□□□□□ -1.95
SYNGAP1Q96PV0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.89□□□□□ -1.95
SYNGAP1Q96PV0 SNORA18.7-201ENST00000516910 131 ntBASIC2.89□□□□□ -1.95
SYNGAP1Q96PV0 AL353149.1-201ENST00000610667 244 ntBASIC2.89□□□□□ -1.95
SYNGAP1Q96PV0 AC015726.2-201ENST00000620112 122 ntBASIC2.89□□□□□ -1.95
SYNGAP1Q96PV0 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SYNGAP1Q96PV0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SYNGAP1Q96PV0 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SYNGAP1Q96PV0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SYNGAP1Q96PV0 SNORD115-28-201ENST00000363931 81 ntBASIC2.88□□□□□ -1.95
SYNGAP1Q96PV0 RNU6-461P-201ENST00000364195 107 ntBASIC2.88□□□□□ -1.95
SYNGAP1Q96PV0 Y_RNA.281-201ENST00000364774 94 ntBASIC2.88□□□□□ -1.95
SYNGAP1Q96PV0 SNORA51.5-201ENST00000384126 131 ntBASIC2.88□□□□□ -1.95
SYNGAP1Q96PV0 MIR1262-201ENST00000408276 93 ntBASIC2.88□□□□□ -1.95
SYNGAP1Q96PV0 HMGN2P32-201ENST00000444648 269 ntBASIC2.88□□□□□ -1.95
SYNGAP1Q96PV0 SNORD45.4-201ENST00000516629 73 ntBASIC2.88□□□□□ -1.95
SYNGAP1Q96PV0 RNU6-826P-201ENST00000516827 104 ntBASIC2.88□□□□□ -1.95
SYNGAP1Q96PV0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.88□□□□□ -1.95
SYNGAP1Q96PV0 AL589743.1-201ENST00000551932 2712 ntBASIC2.87□□□□□ -1.95
SYNGAP1Q96PV0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.87□□□□□ -1.95
SYNGAP1Q96PV0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
SYNGAP1Q96PV0 Y_RNA.85-201ENST00000363014 111 ntBASIC2.87□□□□□ -1.95
SYNGAP1Q96PV0 RNU6-23P-201ENST00000363283 107 ntBASIC2.87□□□□□ -1.95
SYNGAP1Q96PV0 Y_RNA.410-201ENST00000383992 113 ntBASIC2.87□□□□□ -1.95
SYNGAP1Q96PV0 CST2P1-201ENST00000425770 87 ntBASIC2.87□□□□□ -1.95
SYNGAP1Q96PV0 AC245047.3-201ENST00000429428 127 ntBASIC2.87□□□□□ -1.95
SYNGAP1Q96PV0 AL445646.1-201ENST00000431784 216 ntBASIC2.87□□□□□ -1.95
SYNGAP1Q96PV0 AC024995.1-201ENST00000523014 93 ntBASIC2.87□□□□□ -1.95
SYNGAP1Q96PV0 AC004486.1-201ENST00000546846 233 ntBASIC2.87□□□□□ -1.95
SYNGAP1Q96PV0 AC021443.1-201ENST00000604478 211 ntBASIC2.87□□□□□ -1.95
SYNGAP1Q96PV0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
SYNGAP1Q96PV0 AP000648.3-201ENST00000623539 4507 ntBASIC2.86□□□□□ -1.95
SYNGAP1Q96PV0 Y_RNA.37-201ENST00000362606 108 ntBASIC2.86□□□□□ -1.95
SYNGAP1Q96PV0 Y_RNA.163-201ENST00000363702 113 ntBASIC2.86□□□□□ -1.95
SYNGAP1Q96PV0 RNA5SP493-201ENST00000364115 91 ntBASIC2.86□□□□□ -1.95
SYNGAP1Q96PV0 Y_RNA.213-201ENST00000364178 111 ntBASIC2.86□□□□□ -1.95
SYNGAP1Q96PV0 SNORD56.5-201ENST00000364281 72 ntBASIC2.86□□□□□ -1.95
SYNGAP1Q96PV0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.86□□□□□ -1.95
SYNGAP1Q96PV0 SNX2P2-201ENST00000424553 323 ntBASIC2.86□□□□□ -1.95
SYNGAP1Q96PV0 UBBP3-201ENST00000445497 241 ntBASIC2.86□□□□□ -1.95
SYNGAP1Q96PV0 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.86□□□□□ -1.95
SYNGAP1Q96PV0 RNU1-131P-201ENST00000458943 161 ntBASIC2.86□□□□□ -1.95
SYNGAP1Q96PV0 RNY4P20-201ENST00000516678 93 ntBASIC2.86□□□□□ -1.95
SYNGAP1Q96PV0 SNORD36C-201ENST00000516733 66 ntBASIC2.86□□□□□ -1.95
SYNGAP1Q96PV0 MIR1273D-201ENST00000577266 86 ntBASIC2.86□□□□□ -1.95
SYNGAP1Q96PV0 snoU13.31-201ENST00000607291 104 ntBASIC2.86□□□□□ -1.95
SYNGAP1Q96PV0 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.86□□□□□ -1.95
SYNGAP1Q96PV0 AC009831.4-201ENST00000620744 325 ntBASIC2.86□□□□□ -1.95
SYNGAP1Q96PV0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
SYNGAP1Q96PV0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
SYNGAP1Q96PV0 RNA5SP325-201ENST00000363756 130 ntBASIC2.85□□□□□ -1.95
SYNGAP1Q96PV0 RNU6-268P-201ENST00000364174 107 ntBASIC2.85□□□□□ -1.95
SYNGAP1Q96PV0 RNU1-133P-201ENST00000364867 167 ntBASIC2.85□□□□□ -1.95
SYNGAP1Q96PV0 Y_RNA.547-201ENST00000384654 119 ntBASIC2.85□□□□□ -1.95
SYNGAP1Q96PV0 AL359511.1-201ENST00000402970 211 ntBASIC2.85□□□□□ -1.95
SYNGAP1Q96PV0 RPL39P34-201ENST00000477141 156 ntBASIC2.85□□□□□ -1.95
SYNGAP1Q96PV0 SUMO2P16-201ENST00000519475 264 ntBASIC2.85□□□□□ -1.95
SYNGAP1Q96PV0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.85□□□□□ -1.95
SYNGAP1Q96PV0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SYNGAP1Q96PV0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SYNGAP1Q96PV0 AC092881.1-201ENST00000638218 2733 ntBASIC2.84□□□□□ -1.95
SYNGAP1Q96PV0 Y_RNA.49-201ENST00000362714 112 ntBASIC2.84□□□□□ -1.96
SYNGAP1Q96PV0 RNY1P10-201ENST00000363268 113 ntBASIC2.84□□□□□ -1.96
SYNGAP1Q96PV0 Y_RNA.351-201ENST00000365436 96 ntBASIC2.84□□□□□ -1.96
SYNGAP1Q96PV0 SNORA80E-201ENST00000384744 137 ntBASIC2.84□□□□□ -1.96
SYNGAP1Q96PV0 RNA5SP109-201ENST00000391010 116 ntBASIC2.84□□□□□ -1.96
SYNGAP1Q96PV0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.84□□□□□ -1.96
SYNGAP1Q96PV0 AC006441.5-201ENST00000612680 209 ntBASIC2.84□□□□□ -1.96
SYNGAP1Q96PV0 AL035470.1-201ENST00000622571 220 ntBASIC2.84□□□□□ -1.96
SYNGAP1Q96PV0 AL596211.1-201ENST00000569873 2277 ntBASIC2.84□□□□□ -1.96
SYNGAP1Q96PV0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SYNGAP1Q96PV0 RNU1-91P-201ENST00000364746 163 ntBASIC2.83□□□□□ -1.96
SYNGAP1Q96PV0 RNU6-1014P-201ENST00000383940 103 ntBASIC2.83□□□□□ -1.96
SYNGAP1Q96PV0 RNU6-163P-201ENST00000384396 106 ntBASIC2.83□□□□□ -1.96
SYNGAP1Q96PV0 SNORA64-201ENST00000384674 134 ntBASIC2.83□□□□□ -1.96
SYNGAP1Q96PV0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SYNGAP1Q96PV0 SNORA11.4-201ENST00000408823 129 ntBASIC2.83□□□□□ -1.96
SYNGAP1Q96PV0 RNU6-321P-201ENST00000410912 106 ntBASIC2.83□□□□□ -1.96
SYNGAP1Q96PV0 STAG3L5P-204ENST00000443759 179 ntBASIC2.83□□□□□ -1.96
SYNGAP1Q96PV0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.83□□□□□ -1.96
SYNGAP1Q96PV0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.82□□□□□ -1.96
SYNGAP1Q96PV0 ZNF720P1-201ENST00000562403 1939 ntBASIC2.82□□□□□ -1.96
SYNGAP1Q96PV0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SYNGAP1Q96PV0 RNU6-766P-201ENST00000362478 107 ntBASIC2.82□□□□□ -1.96
SYNGAP1Q96PV0 RNY4P6-201ENST00000363667 96 ntBASIC2.82□□□□□ -1.96
SYNGAP1Q96PV0 Y_RNA.198-201ENST00000364013 98 ntBASIC2.82□□□□□ -1.96
SYNGAP1Q96PV0 RNA5SP210-201ENST00000391034 120 ntBASIC2.82□□□□□ -1.96
SYNGAP1Q96PV0 RNA5SP482-201ENST00000391269 118 ntBASIC2.82□□□□□ -1.96
SYNGAP1Q96PV0 AL445687.1-201ENST00000439946 251 ntBASIC2.82□□□□□ -1.96
SYNGAP1Q96PV0 RNU7-164P-201ENST00000459221 62 ntBASIC2.82□□□□□ -1.96
SYNGAP1Q96PV0 RPS26P48-201ENST00000491713 339 ntBASIC2.82□□□□□ -1.96
SYNGAP1Q96PV0 AC234781.5-201ENST00000508429 271 ntBASIC2.82□□□□□ -1.96
SYNGAP1Q96PV0 AP003484.1-201ENST00000530974 250 ntBASIC2.82□□□□□ -1.96
SYNGAP1Q96PV0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms