Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 AC005786.1-201ENST00000588553 154 ntBASIC1.53□□□□□ -2.16
DUX3Q96PT4 AP001485.1-201ENST00000604799 199 ntBASIC1.53□□□□□ -2.16
DUX3Q96PT4 AP006437.1-201ENST00000641440 3685 ntBASIC1.53□□□□□ -2.16
DUX3Q96PT4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.53□□□□□ -2.16
DUX3Q96PT4 U8.1-201ENST00000362843 134 ntBASIC1.52□□□□□ -2.17
DUX3Q96PT4 Y_RNA.218-201ENST00000364218 104 ntBASIC1.52□□□□□ -2.17
DUX3Q96PT4 Y_RNA.265-201ENST00000364677 108 ntBASIC1.52□□□□□ -2.17
DUX3Q96PT4 RNU6-81P-201ENST00000365608 104 ntBASIC1.52□□□□□ -2.17
DUX3Q96PT4 MIR548A2-201ENST00000384956 97 ntBASIC1.52□□□□□ -2.17
DUX3Q96PT4 MIR29C-201ENST00000385231 88 ntBASIC1.52□□□□□ -2.17
DUX3Q96PT4 U8.16-201ENST00000391279 133 ntBASIC1.52□□□□□ -2.17
DUX3Q96PT4 MIR513C-201ENST00000401352 84 ntBASIC1.52□□□□□ -2.17
DUX3Q96PT4 AC244636.1-201ENST00000421152 228 ntBASIC1.52□□□□□ -2.17
DUX3Q96PT4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.52□□□□□ -2.17
DUX3Q96PT4 AC114811.1-201ENST00000507207 168 ntBASIC1.52□□□□□ -2.17
DUX3Q96PT4 RNU6-548P-201ENST00000517083 115 ntBASIC1.52□□□□□ -2.17
DUX3Q96PT4 RNU2-60P-201ENST00000517290 128 ntBASIC1.52□□□□□ -2.17
DUX3Q96PT4 AC024995.1-201ENST00000523014 93 ntBASIC1.52□□□□□ -2.17
DUX3Q96PT4 AP002004.2-201ENST00000531656 154 ntBASIC1.52□□□□□ -2.17
DUX3Q96PT4 DEFB122-202ENST00000569013 197 ntBASIC1.52□□□□□ -2.17
DUX3Q96PT4 MIR6845-201ENST00000613182 61 ntBASIC1.52□□□□□ -2.17
DUX3Q96PT4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
DUX3Q96PT4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
DUX3Q96PT4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
DUX3Q96PT4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
DUX3Q96PT4 MIRLET7C-201ENST00000362160 84 ntBASIC1.51□□□□□ -2.17
DUX3Q96PT4 RNU6-1084P-201ENST00000362498 107 ntBASIC1.51□□□□□ -2.17
DUX3Q96PT4 RNU6-1019P-201ENST00000364424 107 ntBASIC1.51□□□□□ -2.17
DUX3Q96PT4 SNORD50.2-201ENST00000365465 70 ntBASIC1.51□□□□□ -2.17
DUX3Q96PT4 RNU6-296P-201ENST00000384608 107 ntBASIC1.51□□□□□ -2.17
DUX3Q96PT4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
DUX3Q96PT4 AC019129.1-201ENST00000403786 261 ntBASIC1.51□□□□□ -2.17
DUX3Q96PT4 SNORA79-201ENST00000408376 140 ntBASIC1.51□□□□□ -2.17
DUX3Q96PT4 RNA5SP338-201ENST00000410495 85 ntBASIC1.51□□□□□ -2.17
DUX3Q96PT4 FTH1P12-201ENST00000432137 551 ntBASIC1.51□□□□□ -2.17
DUX3Q96PT4 RNU6-693P-201ENST00000516134 107 ntBASIC1.51□□□□□ -2.17
DUX3Q96PT4 SNORD45.4-201ENST00000516629 73 ntBASIC1.51□□□□□ -2.17
DUX3Q96PT4 SUB1P4-201ENST00000566062 339 ntBASIC1.51□□□□□ -2.17
DUX3Q96PT4 MIR5089-201ENST00000580047 84 ntBASIC1.51□□□□□ -2.17
DUX3Q96PT4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.51□□□□□ -2.17
DUX3Q96PT4 AL391516.1-201ENST00000554380 2449 ntBASIC1.51□□□□□ -2.17
DUX3Q96PT4 RNU6-112P-201ENST00000363599 104 ntBASIC1.5□□□□□ -2.17
DUX3Q96PT4 RNU6-309P-201ENST00000364573 106 ntBASIC1.5□□□□□ -2.17
DUX3Q96PT4 RNU6-1138P-201ENST00000365359 106 ntBASIC1.5□□□□□ -2.17
DUX3Q96PT4 RNU6-959P-201ENST00000384671 107 ntBASIC1.5□□□□□ -2.17
DUX3Q96PT4 U8.13-201ENST00000390842 128 ntBASIC1.5□□□□□ -2.17
DUX3Q96PT4 RPL30P13-201ENST00000418873 348 ntBASIC1.5□□□□□ -2.17
DUX3Q96PT4 AF228730.3-201ENST00000436691 102 ntBASIC1.5□□□□□ -2.17
DUX3Q96PT4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.5□□□□□ -2.17
DUX3Q96PT4 AC023449.1-201ENST00000454464 154 ntBASIC1.5□□□□□ -2.17
DUX3Q96PT4 RNU6-365P-201ENST00000517113 106 ntBASIC1.5□□□□□ -2.17
DUX3Q96PT4 AC069114.2-201ENST00000604699 304 ntBASIC1.5□□□□□ -2.17
DUX3Q96PT4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.5□□□□□ -2.17
DUX3Q96PT4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.5□□□□□ -2.17
DUX3Q96PT4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
DUX3Q96PT4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
DUX3Q96PT4 RNU6-235P-201ENST00000362644 107 ntBASIC1.49□□□□□ -2.17
DUX3Q96PT4 RNU6-268P-201ENST00000364174 107 ntBASIC1.49□□□□□ -2.17
DUX3Q96PT4 RNU6-915P-201ENST00000364943 103 ntBASIC1.49□□□□□ -2.17
DUX3Q96PT4 MIR518F-201ENST00000384973 87 ntBASIC1.49□□□□□ -2.17
DUX3Q96PT4 SNORA48.1-201ENST00000390879 135 ntBASIC1.49□□□□□ -2.17
DUX3Q96PT4 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.49□□□□□ -2.17
DUX3Q96PT4 RNA5SP100-201ENST00000410903 110 ntBASIC1.49□□□□□ -2.17
DUX3Q96PT4 RNA5SP59-201ENST00000410922 110 ntBASIC1.49□□□□□ -2.17
DUX3Q96PT4 RNU2-55P-201ENST00000411146 174 ntBASIC1.49□□□□□ -2.17
DUX3Q96PT4 SNRPGP14-201ENST00000435400 219 ntBASIC1.49□□□□□ -2.17
DUX3Q96PT4 HMGN2P23-201ENST00000456759 269 ntBASIC1.49□□□□□ -2.17
DUX3Q96PT4 RNU5E-3P-201ENST00000515913 68 ntBASIC1.49□□□□□ -2.17
DUX3Q96PT4 RNU7-25P-201ENST00000516544 62 ntBASIC1.49□□□□□ -2.17
DUX3Q96PT4 RNA5SP168-201ENST00000516642 112 ntBASIC1.49□□□□□ -2.17
DUX3Q96PT4 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.49□□□□□ -2.17
DUX3Q96PT4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.49□□□□□ -2.17
DUX3Q96PT4 MIR8081-201ENST00000611533 95 ntBASIC1.49□□□□□ -2.17
DUX3Q96PT4 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.49□□□□□ -2.17
DUX3Q96PT4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.49□□□□□ -2.17
DUX3Q96PT4 AL353997.5-201ENST00000618886 171 ntBASIC1.49□□□□□ -2.17
DUX3Q96PT4 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.49□□□□□ -2.17
DUX3Q96PT4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
DUX3Q96PT4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.48□□□□□ -2.17
DUX3Q96PT4 Y_RNA.71-201ENST00000362892 104 ntBASIC1.48□□□□□ -2.17
DUX3Q96PT4 SNORA63D-201ENST00000364359 132 ntBASIC1.48□□□□□ -2.17
DUX3Q96PT4 SNORD113-1-201ENST00000365321 69 ntBASIC1.48□□□□□ -2.17
DUX3Q96PT4 RNU6-597P-201ENST00000365620 102 ntBASIC1.48□□□□□ -2.17
DUX3Q96PT4 Y_RNA.494-201ENST00000384432 111 ntBASIC1.48□□□□□ -2.17
DUX3Q96PT4 SNORA22C-201ENST00000384614 134 ntBASIC1.48□□□□□ -2.17
DUX3Q96PT4 SNORA40-201ENST00000388090 126 ntBASIC1.48□□□□□ -2.17
DUX3Q96PT4 SNORD77.3-201ENST00000391113 65 ntBASIC1.48□□□□□ -2.17
DUX3Q96PT4 MIR548I2-201ENST00000408348 149 ntBASIC1.48□□□□□ -2.17
DUX3Q96PT4 RNU7-107P-201ENST00000459121 61 ntBASIC1.48□□□□□ -2.17
DUX3Q96PT4 RNA5SP153-201ENST00000516498 76 ntBASIC1.48□□□□□ -2.17
DUX3Q96PT4 SNORA31.17-201ENST00000516953 127 ntBASIC1.48□□□□□ -2.17
DUX3Q96PT4 MIR3122-201ENST00000577243 73 ntBASIC1.48□□□□□ -2.17
DUX3Q96PT4 MIR4778-201ENST00000577635 80 ntBASIC1.48□□□□□ -2.17
DUX3Q96PT4 AC097639.2-201ENST00000603159 172 ntBASIC1.48□□□□□ -2.17
DUX3Q96PT4 AC095038.3-201ENST00000634439 195 ntBASIC1.48□□□□□ -2.17
DUX3Q96PT4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
DUX3Q96PT4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
DUX3Q96PT4 RNU6-22P-201ENST00000384355 107 ntBASIC1.47□□□□□ -2.17
DUX3Q96PT4 RNU6-163P-201ENST00000384396 106 ntBASIC1.47□□□□□ -2.17
DUX3Q96PT4 MIR515-2-201ENST00000384883 83 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms