Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.17□□□□□ -2.22
ZIM3Q96PE6 AC008507.4-201ENST00000585464 127 ntBASIC1.17□□□□□ -2.22
ZIM3Q96PE6 AC097639.2-201ENST00000603159 172 ntBASIC1.17□□□□□ -2.22
ZIM3Q96PE6 AC242852.1-201ENST00000612151 96 ntBASIC1.17□□□□□ -2.22
ZIM3Q96PE6 AC244015.1-201ENST00000622301 99 ntBASIC1.17□□□□□ -2.22
ZIM3Q96PE6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
ZIM3Q96PE6 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
ZIM3Q96PE6 MIR367-201ENST00000362299 68 ntBASIC1.16□□□□□ -2.22
ZIM3Q96PE6 Y_RNA.66-201ENST00000362862 102 ntBASIC1.16□□□□□ -2.22
ZIM3Q96PE6 Y_RNA.91-201ENST00000363042 107 ntBASIC1.16□□□□□ -2.22
ZIM3Q96PE6 SNORD45.3-201ENST00000363836 72 ntBASIC1.16□□□□□ -2.22
ZIM3Q96PE6 RNU6-275P-201ENST00000364910 107 ntBASIC1.16□□□□□ -2.22
ZIM3Q96PE6 RNU4-43P-201ENST00000410628 137 ntBASIC1.16□□□□□ -2.22
ZIM3Q96PE6 STAG3L5P-204ENST00000443759 179 ntBASIC1.16□□□□□ -2.22
ZIM3Q96PE6 RPS29P28-201ENST00000446439 141 ntBASIC1.16□□□□□ -2.22
ZIM3Q96PE6 snoU13.9-201ENST00000458927 103 ntBASIC1.16□□□□□ -2.22
ZIM3Q96PE6 RNU7-94P-201ENST00000459576 63 ntBASIC1.16□□□□□ -2.22
ZIM3Q96PE6 RNU6-548P-201ENST00000517083 115 ntBASIC1.16□□□□□ -2.22
ZIM3Q96PE6 MTND5P41-201ENST00000517498 206 ntBASIC1.16□□□□□ -2.22
ZIM3Q96PE6 AL049861.1-201ENST00000603130 150 ntBASIC1.16□□□□□ -2.22
ZIM3Q96PE6 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.16□□□□□ -2.22
ZIM3Q96PE6 uc_338.4-201ENST00000616635 176 ntBASIC1.16□□□□□ -2.22
ZIM3Q96PE6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
ZIM3Q96PE6 Y_RNA.182-201ENST00000363880 111 ntBASIC1.15□□□□□ -2.23
ZIM3Q96PE6 RNU6-1138P-201ENST00000365359 106 ntBASIC1.15□□□□□ -2.23
ZIM3Q96PE6 RNU6-209P-201ENST00000384118 107 ntBASIC1.15□□□□□ -2.23
ZIM3Q96PE6 RNA5SP496-201ENST00000391240 109 ntBASIC1.15□□□□□ -2.23
ZIM3Q96PE6 FTH1P12-201ENST00000432137 551 ntBASIC1.15□□□□□ -2.23
ZIM3Q96PE6 SEPT7P4-201ENST00000437076 306 ntBASIC1.15□□□□□ -2.23
ZIM3Q96PE6 RN7SL429P-201ENST00000479090 223 ntBASIC1.15□□□□□ -2.23
ZIM3Q96PE6 RN7SL489P-201ENST00000486185 223 ntBASIC1.15□□□□□ -2.23
ZIM3Q96PE6 RN7SL327P-201ENST00000488659 223 ntBASIC1.15□□□□□ -2.23
ZIM3Q96PE6 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.15□□□□□ -2.23
ZIM3Q96PE6 RNU6-1007P-201ENST00000516586 107 ntBASIC1.15□□□□□ -2.23
ZIM3Q96PE6 RNU7-121P-201ENST00000516604 62 ntBASIC1.15□□□□□ -2.23
ZIM3Q96PE6 RNU6-182P-201ENST00000516970 105 ntBASIC1.15□□□□□ -2.23
ZIM3Q96PE6 AC007751.1-201ENST00000529260 376 ntBASIC1.15□□□□□ -2.23
ZIM3Q96PE6 MIR4421-201ENST00000578133 69 ntBASIC1.15□□□□□ -2.23
ZIM3Q96PE6 SNORA77B-201ENST00000578179 125 ntBASIC1.15□□□□□ -2.23
ZIM3Q96PE6 RN7SL853P-201ENST00000617250 223 ntBASIC1.15□□□□□ -2.23
ZIM3Q96PE6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
ZIM3Q96PE6 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.14□□□□□ -2.23
ZIM3Q96PE6 Y_RNA.23-201ENST00000362496 106 ntBASIC1.14□□□□□ -2.23
ZIM3Q96PE6 RNU6-103P-201ENST00000363686 107 ntBASIC1.14□□□□□ -2.23
ZIM3Q96PE6 RNU4-84P-201ENST00000364200 139 ntBASIC1.14□□□□□ -2.23
ZIM3Q96PE6 RNU6-978P-201ENST00000364371 103 ntBASIC1.14□□□□□ -2.23
ZIM3Q96PE6 RNU6-1130P-201ENST00000365434 107 ntBASIC1.14□□□□□ -2.23
ZIM3Q96PE6 RNU6-804P-201ENST00000384286 107 ntBASIC1.14□□□□□ -2.23
ZIM3Q96PE6 Y_RNA.486-201ENST00000384398 107 ntBASIC1.14□□□□□ -2.23
ZIM3Q96PE6 Y_RNA.506-201ENST00000384494 102 ntBASIC1.14□□□□□ -2.23
ZIM3Q96PE6 RNU4-70P-201ENST00000384579 139 ntBASIC1.14□□□□□ -2.23
ZIM3Q96PE6 RNU6-1228P-201ENST00000391014 107 ntBASIC1.14□□□□□ -2.23
ZIM3Q96PE6 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.14□□□□□ -2.23
ZIM3Q96PE6 snoU13.27-201ENST00000459278 104 ntBASIC1.14□□□□□ -2.23
ZIM3Q96PE6 AC005908.1-201ENST00000468701 347 ntBASIC1.14□□□□□ -2.23
ZIM3Q96PE6 RNA5SP168-201ENST00000516642 112 ntBASIC1.14□□□□□ -2.23
ZIM3Q96PE6 RNU7-149P-201ENST00000516739 59 ntBASIC1.14□□□□□ -2.23
ZIM3Q96PE6 RNU1-92P-201ENST00000517017 135 ntBASIC1.14□□□□□ -2.23
ZIM3Q96PE6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
ZIM3Q96PE6 AL512598.1-201ENST00000610158 273 ntBASIC1.14□□□□□ -2.23
ZIM3Q96PE6 AC021753.1-201ENST00000635724 168 ntBASIC1.14□□□□□ -2.23
ZIM3Q96PE6 MIR376A2-201ENST00000636782 80 ntBASIC1.14□□□□□ -2.23
ZIM3Q96PE6 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
ZIM3Q96PE6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
ZIM3Q96PE6 MIR302D-201ENST00000362275 68 ntBASIC1.13□□□□□ -2.23
ZIM3Q96PE6 MIR526A1-201ENST00000384897 85 ntBASIC1.13□□□□□ -2.23
ZIM3Q96PE6 Y_RNA.587-201ENST00000391210 103 ntBASIC1.13□□□□□ -2.23
ZIM3Q96PE6 RNA5SP482-201ENST00000391269 118 ntBASIC1.13□□□□□ -2.23
ZIM3Q96PE6 Y_RNA.622-201ENST00000411091 108 ntBASIC1.13□□□□□ -2.23
ZIM3Q96PE6 AC069257.2-201ENST00000441819 155 ntBASIC1.13□□□□□ -2.23
ZIM3Q96PE6 AC245517.4-201ENST00000448601 281 ntBASIC1.13□□□□□ -2.23
ZIM3Q96PE6 RNU2-56P-201ENST00000516826 190 ntBASIC1.13□□□□□ -2.23
ZIM3Q96PE6 DNAJC19P9-201ENST00000555084 351 ntBASIC1.13□□□□□ -2.23
ZIM3Q96PE6 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.13□□□□□ -2.23
ZIM3Q96PE6 MIR3658-201ENST00000636291 56 ntBASIC1.13□□□□□ -2.23
ZIM3Q96PE6 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.13□□□□□ -2.23
ZIM3Q96PE6 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
ZIM3Q96PE6 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
ZIM3Q96PE6 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
ZIM3Q96PE6 Y_RNA.170-201ENST00000363746 110 ntBASIC1.12□□□□□ -2.23
ZIM3Q96PE6 RNU6-457P-201ENST00000363999 107 ntBASIC1.12□□□□□ -2.23
ZIM3Q96PE6 RNU6-312P-201ENST00000364629 107 ntBASIC1.12□□□□□ -2.23
ZIM3Q96PE6 Y_RNA.634-201ENST00000364811 113 ntBASIC1.12□□□□□ -2.23
ZIM3Q96PE6 RNY3P5-201ENST00000384127 102 ntBASIC1.12□□□□□ -2.23
ZIM3Q96PE6 Y_RNA.464-201ENST00000384282 110 ntBASIC1.12□□□□□ -2.23
ZIM3Q96PE6 MIR15B-201ENST00000385045 98 ntBASIC1.12□□□□□ -2.23
ZIM3Q96PE6 SNORA17.3-201ENST00000391159 129 ntBASIC1.12□□□□□ -2.23
ZIM3Q96PE6 AC114811.1-201ENST00000507207 168 ntBASIC1.12□□□□□ -2.23
ZIM3Q96PE6 MIR4431-201ENST00000579990 94 ntBASIC1.12□□□□□ -2.23
ZIM3Q96PE6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.11□□□□□ -2.23
ZIM3Q96PE6 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
ZIM3Q96PE6 RNU1-17P-201ENST00000363022 152 ntBASIC1.11□□□□□ -2.23
ZIM3Q96PE6 SNORD68-201ENST00000363214 84 ntBASIC1.11□□□□□ -2.23
ZIM3Q96PE6 RNU6-268P-201ENST00000364174 107 ntBASIC1.11□□□□□ -2.23
ZIM3Q96PE6 RNU6-1336P-201ENST00000383886 109 ntBASIC1.11□□□□□ -2.23
ZIM3Q96PE6 RNU6-643P-201ENST00000384018 107 ntBASIC1.11□□□□□ -2.23
ZIM3Q96PE6 RNU6-360P-201ENST00000390944 104 ntBASIC1.11□□□□□ -2.23
ZIM3Q96PE6 MIR1261-201ENST00000408659 82 ntBASIC1.11□□□□□ -2.23
ZIM3Q96PE6 Y_RNA.621-201ENST00000411065 96 ntBASIC1.11□□□□□ -2.23
ZIM3Q96PE6 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms