Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 SNORD45.3-201ENST00000363836 72 ntBASIC1.36□□□□□ -2.19
FOXN4Q96NZ1 RNU1-42P-201ENST00000364033 160 ntBASIC1.36□□□□□ -2.19
FOXN4Q96NZ1 RNU6-1019P-201ENST00000364424 107 ntBASIC1.36□□□□□ -2.19
FOXN4Q96NZ1 RNU6-818P-201ENST00000364837 108 ntBASIC1.36□□□□□ -2.19
FOXN4Q96NZ1 RNU6-728P-201ENST00000365375 104 ntBASIC1.36□□□□□ -2.19
FOXN4Q96NZ1 SNORD116-18-201ENST00000383961 92 ntBASIC1.36□□□□□ -2.19
FOXN4Q96NZ1 SNRPGP10-201ENST00000432323 225 ntBASIC1.36□□□□□ -2.19
FOXN4Q96NZ1 SNRPGP8-201ENST00000454064 226 ntBASIC1.36□□□□□ -2.19
FOXN4Q96NZ1 snoU13.9-201ENST00000458927 103 ntBASIC1.36□□□□□ -2.19
FOXN4Q96NZ1 SNORD11-201ENST00000459124 84 ntBASIC1.36□□□□□ -2.19
FOXN4Q96NZ1 RNU7-94P-201ENST00000459576 63 ntBASIC1.36□□□□□ -2.19
FOXN4Q96NZ1 HMGN1P7-201ENST00000491722 313 ntBASIC1.36□□□□□ -2.19
FOXN4Q96NZ1 RNU6-346P-201ENST00000516288 111 ntBASIC1.36□□□□□ -2.19
FOXN4Q96NZ1 DNAJC19P9-201ENST00000555084 351 ntBASIC1.36□□□□□ -2.19
FOXN4Q96NZ1 MIR4431-201ENST00000579990 94 ntBASIC1.36□□□□□ -2.19
FOXN4Q96NZ1 MIR2681-201ENST00000581814 105 ntBASIC1.36□□□□□ -2.19
FOXN4Q96NZ1 MIR3133-201ENST00000583157 78 ntBASIC1.36□□□□□ -2.19
FOXN4Q96NZ1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.36□□□□□ -2.19
FOXN4Q96NZ1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
FOXN4Q96NZ1 SNORD68-201ENST00000363214 84 ntBASIC1.35□□□□□ -2.19
FOXN4Q96NZ1 RNU4-84P-201ENST00000364200 139 ntBASIC1.35□□□□□ -2.19
FOXN4Q96NZ1 Y_RNA.265-201ENST00000364677 108 ntBASIC1.35□□□□□ -2.19
FOXN4Q96NZ1 SNORA4.2-201ENST00000365313 147 ntBASIC1.35□□□□□ -2.19
FOXN4Q96NZ1 Y_RNA.441-201ENST00000384123 112 ntBASIC1.35□□□□□ -2.19
FOXN4Q96NZ1 RNU6-187P-201ENST00000384139 106 ntBASIC1.35□□□□□ -2.19
FOXN4Q96NZ1 RNU6-440P-201ENST00000390882 105 ntBASIC1.35□□□□□ -2.19
FOXN4Q96NZ1 RNA5SP100-201ENST00000410903 110 ntBASIC1.35□□□□□ -2.19
FOXN4Q96NZ1 RNA5SP59-201ENST00000410922 110 ntBASIC1.35□□□□□ -2.19
FOXN4Q96NZ1 RNA5SP247-201ENST00000411181 105 ntBASIC1.35□□□□□ -2.19
FOXN4Q96NZ1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.35□□□□□ -2.19
FOXN4Q96NZ1 AC023449.1-201ENST00000454464 154 ntBASIC1.35□□□□□ -2.19
FOXN4Q96NZ1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.35□□□□□ -2.19
FOXN4Q96NZ1 NDUFA4P2-201ENST00000489989 244 ntBASIC1.35□□□□□ -2.19
FOXN4Q96NZ1 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.35□□□□□ -2.19
FOXN4Q96NZ1 RNU6-1212P-201ENST00000517023 104 ntBASIC1.35□□□□□ -2.19
FOXN4Q96NZ1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
FOXN4Q96NZ1 AP002004.2-201ENST00000531656 154 ntBASIC1.35□□□□□ -2.19
FOXN4Q96NZ1 AL645939.4-201ENST00000604495 135 ntBASIC1.35□□□□□ -2.19
FOXN4Q96NZ1 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.35□□□□□ -2.19
FOXN4Q96NZ1 uc_338.4-201ENST00000616635 176 ntBASIC1.35□□□□□ -2.19
FOXN4Q96NZ1 MIR8054-201ENST00000620877 86 ntBASIC1.35□□□□□ -2.19
FOXN4Q96NZ1 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.35□□□□□ -2.19
FOXN4Q96NZ1 ICE2P2-201ENST00000483823 2787 ntBASIC1.35□□□□□ -2.19
FOXN4Q96NZ1 MIR26B-201ENST00000362251 77 ntBASIC1.34□□□□□ -2.19
FOXN4Q96NZ1 RNU6-60P-201ENST00000364792 103 ntBASIC1.34□□□□□ -2.19
FOXN4Q96NZ1 RNU6-643P-201ENST00000384018 107 ntBASIC1.34□□□□□ -2.19
FOXN4Q96NZ1 Y_RNA.506-201ENST00000384494 102 ntBASIC1.34□□□□□ -2.19
FOXN4Q96NZ1 RNU6-125P-201ENST00000384505 107 ntBASIC1.34□□□□□ -2.19
FOXN4Q96NZ1 MIR562-201ENST00000384894 95 ntBASIC1.34□□□□□ -2.19
FOXN4Q96NZ1 MIR320A-201ENST00000385302 82 ntBASIC1.34□□□□□ -2.19
FOXN4Q96NZ1 RNU2-7P-201ENST00000410794 178 ntBASIC1.34□□□□□ -2.19
FOXN4Q96NZ1 RPL30P13-201ENST00000418873 348 ntBASIC1.34□□□□□ -2.19
FOXN4Q96NZ1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.34□□□□□ -2.19
FOXN4Q96NZ1 HSPE1P9-201ENST00000440046 311 ntBASIC1.34□□□□□ -2.19
FOXN4Q96NZ1 STAG3L5P-204ENST00000443759 179 ntBASIC1.34□□□□□ -2.19
FOXN4Q96NZ1 RNU7-95P-201ENST00000459222 64 ntBASIC1.34□□□□□ -2.19
FOXN4Q96NZ1 AC005840.1-201ENST00000498412 377 ntBASIC1.34□□□□□ -2.19
FOXN4Q96NZ1 SNORA31.10-201ENST00000516482 106 ntBASIC1.34□□□□□ -2.19
FOXN4Q96NZ1 RNU7-149P-201ENST00000516739 59 ntBASIC1.34□□□□□ -2.19
FOXN4Q96NZ1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.34□□□□□ -2.19
FOXN4Q96NZ1 Pinc.1-201ENST00000616452 154 ntBASIC1.34□□□□□ -2.19
FOXN4Q96NZ1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.34□□□□□ -2.2
FOXN4Q96NZ1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.33□□□□□ -2.2
FOXN4Q96NZ1 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
FOXN4Q96NZ1 RNY3P5-201ENST00000384127 102 ntBASIC1.33□□□□□ -2.2
FOXN4Q96NZ1 RNU6-239P-201ENST00000390990 99 ntBASIC1.33□□□□□ -2.2
FOXN4Q96NZ1 SNORD72-201ENST00000390994 80 ntBASIC1.33□□□□□ -2.2
FOXN4Q96NZ1 SNORA67.6-201ENST00000391093 99 ntBASIC1.33□□□□□ -2.2
FOXN4Q96NZ1 RNU6-131P-201ENST00000391144 107 ntBASIC1.33□□□□□ -2.2
FOXN4Q96NZ1 RNU6-321P-201ENST00000410912 106 ntBASIC1.33□□□□□ -2.2
FOXN4Q96NZ1 AL354695.1-201ENST00000427935 228 ntBASIC1.33□□□□□ -2.2
FOXN4Q96NZ1 TRMT112P2-201ENST00000512910 132 ntBASIC1.33□□□□□ -2.2
FOXN4Q96NZ1 RNU7-200P-201ENST00000516105 62 ntBASIC1.33□□□□□ -2.2
FOXN4Q96NZ1 RNA5SP437-201ENST00000517249 129 ntBASIC1.33□□□□□ -2.2
FOXN4Q96NZ1 AL358944.1-201ENST00000528537 144 ntBASIC1.33□□□□□ -2.2
FOXN4Q96NZ1 SUB1P4-201ENST00000566062 339 ntBASIC1.33□□□□□ -2.2
FOXN4Q96NZ1 MIR3658-201ENST00000636291 56 ntBASIC1.33□□□□□ -2.2
FOXN4Q96NZ1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
FOXN4Q96NZ1 MIR337-201ENST00000362281 93 ntBASIC1.32□□□□□ -2.2
FOXN4Q96NZ1 Y_RNA.91-201ENST00000363042 107 ntBASIC1.32□□□□□ -2.2
FOXN4Q96NZ1 RNU6-112P-201ENST00000363599 104 ntBASIC1.32□□□□□ -2.2
FOXN4Q96NZ1 RNU6-151P-201ENST00000364158 107 ntBASIC1.32□□□□□ -2.2
FOXN4Q96NZ1 RNU6-449P-201ENST00000383914 107 ntBASIC1.32□□□□□ -2.2
FOXN4Q96NZ1 RNU6-484P-201ENST00000384016 107 ntBASIC1.32□□□□□ -2.2
FOXN4Q96NZ1 Y_RNA.432-201ENST00000384087 111 ntBASIC1.32□□□□□ -2.2
FOXN4Q96NZ1 MIR522-201ENST00000385071 87 ntBASIC1.32□□□□□ -2.2
FOXN4Q96NZ1 OR9P1P-201ENST00000496431 281 ntBASIC1.32□□□□□ -2.2
FOXN4Q96NZ1 AC107027.2-201ENST00000512197 115 ntBASIC1.32□□□□□ -2.2
FOXN4Q96NZ1 SNORD77.4-201ENST00000516158 81 ntBASIC1.32□□□□□ -2.2
FOXN4Q96NZ1 RNU6-1299P-201ENST00000516316 100 ntBASIC1.32□□□□□ -2.2
FOXN4Q96NZ1 RNU6-1116P-201ENST00000517269 99 ntBASIC1.32□□□□□ -2.2
FOXN4Q96NZ1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
FOXN4Q96NZ1 AL359821.1-201ENST00000605519 182 ntBASIC1.32□□□□□ -2.2
FOXN4Q96NZ1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
FOXN4Q96NZ1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.31□□□□□ -2.2
FOXN4Q96NZ1 RNU6-1084P-201ENST00000362498 107 ntBASIC1.31□□□□□ -2.2
FOXN4Q96NZ1 SNORA63D-201ENST00000364359 132 ntBASIC1.31□□□□□ -2.2
FOXN4Q96NZ1 SNORD50B-201ENST00000364995 70 ntBASIC1.31□□□□□ -2.2
FOXN4Q96NZ1 RNU6-746P-201ENST00000384112 109 ntBASIC1.31□□□□□ -2.2
FOXN4Q96NZ1 Y_RNA.486-201ENST00000384398 107 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms