Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC079804.2-201ENST00000490376 200 ntBASIC2.47□□□□□ -2.01
CHAMP1Q96JM3 RNU6-1333P-201ENST00000516162 93 ntBASIC2.47□□□□□ -2.01
CHAMP1Q96JM3 RNVU1-2-201ENST00000516326 135 ntBASIC2.47□□□□□ -2.01
CHAMP1Q96JM3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.47□□□□□ -2.01
CHAMP1Q96JM3 AC011603.4-201ENST00000611325 277 ntBASIC2.47□□□□□ -2.01
CHAMP1Q96JM3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.47□□□□□ -2.01
CHAMP1Q96JM3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.47□□□□□ -2.01
CHAMP1Q96JM3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CHAMP1Q96JM3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
CHAMP1Q96JM3 RNA5SP465-201ENST00000391195 109 ntBASIC2.46□□□□□ -2.02
CHAMP1Q96JM3 RNA5SP482-201ENST00000391269 118 ntBASIC2.46□□□□□ -2.02
CHAMP1Q96JM3 MIR891A-201ENST00000401237 79 ntBASIC2.46□□□□□ -2.02
CHAMP1Q96JM3 RNA5SP127-201ENST00000411051 133 ntBASIC2.46□□□□□ -2.02
CHAMP1Q96JM3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.46□□□□□ -2.02
CHAMP1Q96JM3 RNU4-57P-201ENST00000515980 135 ntBASIC2.46□□□□□ -2.02
CHAMP1Q96JM3 RNU6-659P-201ENST00000516454 104 ntBASIC2.46□□□□□ -2.02
CHAMP1Q96JM3 RNU7-28P-201ENST00000516759 62 ntBASIC2.46□□□□□ -2.02
CHAMP1Q96JM3 Y_RNA.714-201ENST00000517065 90 ntBASIC2.46□□□□□ -2.02
CHAMP1Q96JM3 MIR3121-201ENST00000579680 77 ntBASIC2.46□□□□□ -2.02
CHAMP1Q96JM3 MIR3129-201ENST00000581095 76 ntBASIC2.46□□□□□ -2.02
CHAMP1Q96JM3 AC006441.5-201ENST00000612680 209 ntBASIC2.46□□□□□ -2.02
CHAMP1Q96JM3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.46□□□□□ -2.02
CHAMP1Q96JM3 AC245060.5-201ENST00000610778 3293 ntBASIC2.45□□□□□ -2.02
CHAMP1Q96JM3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.45□□□□□ -2.02
CHAMP1Q96JM3 MIRLET7C-201ENST00000362160 84 ntBASIC2.45□□□□□ -2.02
CHAMP1Q96JM3 Y_RNA.52-201ENST00000362760 96 ntBASIC2.45□□□□□ -2.02
CHAMP1Q96JM3 RNU1-17P-201ENST00000363022 152 ntBASIC2.45□□□□□ -2.02
CHAMP1Q96JM3 RNU6-508P-201ENST00000363231 103 ntBASIC2.45□□□□□ -2.02
CHAMP1Q96JM3 RNU6-1292P-201ENST00000383856 107 ntBASIC2.45□□□□□ -2.02
CHAMP1Q96JM3 MIR518F-201ENST00000384973 87 ntBASIC2.45□□□□□ -2.02
CHAMP1Q96JM3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.45□□□□□ -2.02
CHAMP1Q96JM3 RNU6-1270P-201ENST00000517128 108 ntBASIC2.45□□□□□ -2.02
CHAMP1Q96JM3 SUB1P4-201ENST00000566062 339 ntBASIC2.45□□□□□ -2.02
CHAMP1Q96JM3 SNORD14A-201ENST00000606526 91 ntBASIC2.45□□□□□ -2.02
CHAMP1Q96JM3 MIR8070-201ENST00000616510 88 ntBASIC2.45□□□□□ -2.02
CHAMP1Q96JM3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CHAMP1Q96JM3 SNORA64-201ENST00000384674 134 ntBASIC2.44□□□□□ -2.02
CHAMP1Q96JM3 MIR144-201ENST00000384886 86 ntBASIC2.44□□□□□ -2.02
CHAMP1Q96JM3 SNORA48.1-201ENST00000390879 135 ntBASIC2.44□□□□□ -2.02
CHAMP1Q96JM3 SNORD77.3-201ENST00000391113 65 ntBASIC2.44□□□□□ -2.02
CHAMP1Q96JM3 AL603914.1-201ENST00000401964 204 ntBASIC2.44□□□□□ -2.02
CHAMP1Q96JM3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.44□□□□□ -2.02
CHAMP1Q96JM3 SNRPGP13-201ENST00000442212 177 ntBASIC2.44□□□□□ -2.02
CHAMP1Q96JM3 RNU6-693P-201ENST00000516134 107 ntBASIC2.44□□□□□ -2.02
CHAMP1Q96JM3 SNORD45.4-201ENST00000516629 73 ntBASIC2.44□□□□□ -2.02
CHAMP1Q96JM3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.44□□□□□ -2.02
CHAMP1Q96JM3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CHAMP1Q96JM3 AL442644.1-201ENST00000454390 3105 ntBASIC2.44□□□□□ -2.02
CHAMP1Q96JM3 RNU6-268P-201ENST00000364174 107 ntBASIC2.43□□□□□ -2.02
CHAMP1Q96JM3 Y_RNA.242-201ENST00000364473 110 ntBASIC2.43□□□□□ -2.02
CHAMP1Q96JM3 Y_RNA.525-201ENST00000384570 113 ntBASIC2.43□□□□□ -2.02
CHAMP1Q96JM3 SUMO1P4-201ENST00000429430 302 ntBASIC2.43□□□□□ -2.02
CHAMP1Q96JM3 HSPE1P9-201ENST00000440046 311 ntBASIC2.43□□□□□ -2.02
CHAMP1Q96JM3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.43□□□□□ -2.02
CHAMP1Q96JM3 RNA5SP236-201ENST00000516169 116 ntBASIC2.43□□□□□ -2.02
CHAMP1Q96JM3 SNORA18.4-201ENST00000516440 124 ntBASIC2.43□□□□□ -2.02
CHAMP1Q96JM3 RNU6-295P-201ENST00000516901 104 ntBASIC2.43□□□□□ -2.02
CHAMP1Q96JM3 RNU1-104P-201ENST00000517280 175 ntBASIC2.43□□□□□ -2.02
CHAMP1Q96JM3 MIR376A2-201ENST00000636782 80 ntBASIC2.43□□□□□ -2.02
CHAMP1Q96JM3 RNU6-309P-201ENST00000364573 106 ntBASIC2.42□□□□□ -2.02
CHAMP1Q96JM3 Y_RNA.265-201ENST00000364677 108 ntBASIC2.42□□□□□ -2.02
CHAMP1Q96JM3 SNORA4.2-201ENST00000365313 147 ntBASIC2.42□□□□□ -2.02
CHAMP1Q96JM3 SNORA67.3-201ENST00000384366 140 ntBASIC2.42□□□□□ -2.02
CHAMP1Q96JM3 Y_RNA.563-201ENST00000384707 108 ntBASIC2.42□□□□□ -2.02
CHAMP1Q96JM3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CHAMP1Q96JM3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CHAMP1Q96JM3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.42□□□□□ -2.02
CHAMP1Q96JM3 RNA5SP501-201ENST00000410990 112 ntBASIC2.42□□□□□ -2.02
CHAMP1Q96JM3 AL158823.1-201ENST00000418441 478 ntBASIC2.42□□□□□ -2.02
CHAMP1Q96JM3 AF228730.3-201ENST00000436691 102 ntBASIC2.42□□□□□ -2.02
CHAMP1Q96JM3 STAG3L5P-204ENST00000443759 179 ntBASIC2.42□□□□□ -2.02
CHAMP1Q96JM3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.42□□□□□ -2.02
CHAMP1Q96JM3 RNU7-107P-201ENST00000459121 61 ntBASIC2.42□□□□□ -2.02
CHAMP1Q96JM3 AC090255.1-201ENST00000495779 349 ntBASIC2.42□□□□□ -2.02
CHAMP1Q96JM3 IGLV3-17-201ENST00000519099 244 ntBASIC2.42□□□□□ -2.02
CHAMP1Q96JM3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.42□□□□□ -2.02
CHAMP1Q96JM3 snoU13.31-201ENST00000607291 104 ntBASIC2.42□□□□□ -2.02
CHAMP1Q96JM3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
CHAMP1Q96JM3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CHAMP1Q96JM3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CHAMP1Q96JM3 SNORA3A-201ENST00000364113 130 ntBASIC2.41□□□□□ -2.02
CHAMP1Q96JM3 Y_RNA.224-201ENST00000364308 111 ntBASIC2.41□□□□□ -2.02
CHAMP1Q96JM3 snoU2-30.1-201ENST00000365012 70 ntBASIC2.41□□□□□ -2.02
CHAMP1Q96JM3 RNU6-442P-201ENST00000383968 104 ntBASIC2.41□□□□□ -2.02
CHAMP1Q96JM3 RNU6-296P-201ENST00000384608 107 ntBASIC2.41□□□□□ -2.02
CHAMP1Q96JM3 Y_RNA.629-201ENST00000411368 105 ntBASIC2.41□□□□□ -2.02
CHAMP1Q96JM3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.41□□□□□ -2.02
CHAMP1Q96JM3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.41□□□□□ -2.02
CHAMP1Q96JM3 Y_RNA.692-201ENST00000516627 105 ntBASIC2.41□□□□□ -2.02
CHAMP1Q96JM3 SCARNA15-202ENST00000516881 127 ntBASIC2.41□□□□□ -2.02
CHAMP1Q96JM3 SNORA31.25-201ENST00000517242 134 ntBASIC2.41□□□□□ -2.02
CHAMP1Q96JM3 RNU6-1116P-201ENST00000517269 99 ntBASIC2.41□□□□□ -2.02
CHAMP1Q96JM3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
CHAMP1Q96JM3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CHAMP1Q96JM3 RNU6-1084P-201ENST00000362498 107 ntBASIC2.4□□□□□ -2.03
CHAMP1Q96JM3 RNU6-112P-201ENST00000363599 104 ntBASIC2.4□□□□□ -2.03
CHAMP1Q96JM3 Y_RNA.336-201ENST00000365307 109 ntBASIC2.4□□□□□ -2.03
CHAMP1Q96JM3 RNU1-52P-201ENST00000384190 164 ntBASIC2.4□□□□□ -2.03
CHAMP1Q96JM3 MIR548O-201ENST00000408583 114 ntBASIC2.4□□□□□ -2.03
CHAMP1Q96JM3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 549 ms