Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 SNORD45.4-201ENST00000516629 73 ntBASIC2.04□□□□□ -2.08
PTCD3Q96EY7 RNU7-28P-201ENST00000516759 62 ntBASIC2.04□□□□□ -2.08
PTCD3Q96EY7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.04□□□□□ -2.08
PTCD3Q96EY7 MIR3121-201ENST00000579680 77 ntBASIC2.04□□□□□ -2.08
PTCD3Q96EY7 AC006441.5-201ENST00000612680 209 ntBASIC2.04□□□□□ -2.08
PTCD3Q96EY7 AP006437.1-201ENST00000641440 3685 ntBASIC2.04□□□□□ -2.08
PTCD3Q96EY7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
PTCD3Q96EY7 RNU6-268P-201ENST00000364174 107 ntBASIC2.03□□□□□ -2.08
PTCD3Q96EY7 RNU6-309P-201ENST00000364573 106 ntBASIC2.03□□□□□ -2.08
PTCD3Q96EY7 SNORA4.2-201ENST00000365313 147 ntBASIC2.03□□□□□ -2.08
PTCD3Q96EY7 RNU6-1292P-201ENST00000383856 107 ntBASIC2.03□□□□□ -2.08
PTCD3Q96EY7 SNORA48.1-201ENST00000390879 135 ntBASIC2.03□□□□□ -2.08
PTCD3Q96EY7 RNA5SP465-201ENST00000391195 109 ntBASIC2.03□□□□□ -2.08
PTCD3Q96EY7 AL158823.1-201ENST00000418441 478 ntBASIC2.03□□□□□ -2.08
PTCD3Q96EY7 AF228730.3-201ENST00000436691 102 ntBASIC2.03□□□□□ -2.08
PTCD3Q96EY7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.03□□□□□ -2.08
PTCD3Q96EY7 MIR514B-201ENST00000516774 80 ntBASIC2.03□□□□□ -2.08
PTCD3Q96EY7 RNU6-1116P-201ENST00000517269 99 ntBASIC2.03□□□□□ -2.08
PTCD3Q96EY7 SUB1P4-201ENST00000566062 339 ntBASIC2.03□□□□□ -2.08
PTCD3Q96EY7 AL590808.1-201ENST00000618696 141 ntBASIC2.03□□□□□ -2.08
PTCD3Q96EY7 MIR376A2-201ENST00000636782 80 ntBASIC2.03□□□□□ -2.08
PTCD3Q96EY7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
PTCD3Q96EY7 RNU6-1084P-201ENST00000362498 107 ntBASIC2.02□□□□□ -2.09
PTCD3Q96EY7 AL603914.1-201ENST00000401964 204 ntBASIC2.02□□□□□ -2.09
PTCD3Q96EY7 RNA5SP501-201ENST00000410990 112 ntBASIC2.02□□□□□ -2.09
PTCD3Q96EY7 RN7SL274P-201ENST00000492268 272 ntBASIC2.02□□□□□ -2.09
PTCD3Q96EY7 MIR1273D-201ENST00000577266 86 ntBASIC2.02□□□□□ -2.09
PTCD3Q96EY7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
PTCD3Q96EY7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
PTCD3Q96EY7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
PTCD3Q96EY7 RNU6-235P-201ENST00000362644 107 ntBASIC2.01□□□□□ -2.09
PTCD3Q96EY7 snoU2-30.1-201ENST00000365012 70 ntBASIC2.01□□□□□ -2.09
PTCD3Q96EY7 RNU6-296P-201ENST00000384608 107 ntBASIC2.01□□□□□ -2.09
PTCD3Q96EY7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
PTCD3Q96EY7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.01□□□□□ -2.09
PTCD3Q96EY7 AC114811.1-201ENST00000507207 168 ntBASIC2.01□□□□□ -2.09
PTCD3Q96EY7 RNU7-25P-201ENST00000516544 62 ntBASIC2.01□□□□□ -2.09
PTCD3Q96EY7 Y_RNA.692-201ENST00000516627 105 ntBASIC2.01□□□□□ -2.09
PTCD3Q96EY7 RNA5SP437-201ENST00000517249 129 ntBASIC2.01□□□□□ -2.09
PTCD3Q96EY7 MIR3124-201ENST00000582636 67 ntBASIC2.01□□□□□ -2.09
PTCD3Q96EY7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.01□□□□□ -2.09
PTCD3Q96EY7 MTND5P32-201ENST00000560711 1802 ntBASIC2.01□□□□□ -2.09
PTCD3Q96EY7 AL359851.1-201ENST00000569460 4997 ntBASIC2□□□□□ -2.09
PTCD3Q96EY7 AL442644.1-201ENST00000454390 3105 ntBASIC2□□□□□ -2.09
PTCD3Q96EY7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2□□□□□ -2.09
PTCD3Q96EY7 Y_RNA.114-201ENST00000363265 113 ntBASIC2□□□□□ -2.09
PTCD3Q96EY7 RNU6-112P-201ENST00000363599 104 ntBASIC2□□□□□ -2.09
PTCD3Q96EY7 SNORD14E-201ENST00000364009 85 ntBASIC2□□□□□ -2.09
PTCD3Q96EY7 Y_RNA.242-201ENST00000364473 110 ntBASIC2□□□□□ -2.09
PTCD3Q96EY7 RNU6-442P-201ENST00000383968 104 ntBASIC2□□□□□ -2.09
PTCD3Q96EY7 SNORA70B-201ENST00000384210 135 ntBASIC2□□□□□ -2.09
PTCD3Q96EY7 Y_RNA.547-201ENST00000384654 119 ntBASIC2□□□□□ -2.09
PTCD3Q96EY7 MIR548O-201ENST00000408583 114 ntBASIC2□□□□□ -2.09
PTCD3Q96EY7 RNA5SP425-201ENST00000410336 112 ntBASIC2□□□□□ -2.09
PTCD3Q96EY7 Y_RNA.629-201ENST00000411368 105 ntBASIC2□□□□□ -2.09
PTCD3Q96EY7 Z98742.3-201ENST00000418637 326 ntBASIC2□□□□□ -2.09
PTCD3Q96EY7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2□□□□□ -2.09
PTCD3Q96EY7 AC069257.2-201ENST00000441819 155 ntBASIC2□□□□□ -2.09
PTCD3Q96EY7 AL158147.1-201ENST00000443970 75 ntBASIC2□□□□□ -2.09
PTCD3Q96EY7 Y_RNA.651-201ENST00000459380 103 ntBASIC2□□□□□ -2.09
PTCD3Q96EY7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2□□□□□ -2.09
PTCD3Q96EY7 RNA5SP236-201ENST00000516169 116 ntBASIC2□□□□□ -2.09
PTCD3Q96EY7 Y_RNA.690-201ENST00000516603 95 ntBASIC2□□□□□ -2.09
PTCD3Q96EY7 SCARNA15-202ENST00000516881 127 ntBASIC2□□□□□ -2.09
PTCD3Q96EY7 SNORA31.25-201ENST00000517242 134 ntBASIC2□□□□□ -2.09
PTCD3Q96EY7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2□□□□□ -2.09
PTCD3Q96EY7 AC104984.5-201ENST00000586878 94 ntBASIC2□□□□□ -2.09
PTCD3Q96EY7 AC064859.1-201ENST00000624741 174 ntBASIC2□□□□□ -2.09
PTCD3Q96EY7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2□□□□□ -2.09
PTCD3Q96EY7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2□□□□□ -2.09
PTCD3Q96EY7 SNORA16B-201ENST00000364674 135 ntBASIC1.99□□□□□ -2.09
PTCD3Q96EY7 Y_RNA.336-201ENST00000365307 109 ntBASIC1.99□□□□□ -2.09
PTCD3Q96EY7 Y_RNA.563-201ENST00000384707 108 ntBASIC1.99□□□□□ -2.09
PTCD3Q96EY7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
PTCD3Q96EY7 U8.16-201ENST00000391279 133 ntBASIC1.99□□□□□ -2.09
PTCD3Q96EY7 RNA5SP489-201ENST00000410986 109 ntBASIC1.99□□□□□ -2.09
PTCD3Q96EY7 CALM2P4-201ENST00000430810 426 ntBASIC1.99□□□□□ -2.09
PTCD3Q96EY7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.99□□□□□ -2.09
PTCD3Q96EY7 Y_RNA.757-201ENST00000578934 114 ntBASIC1.99□□□□□ -2.09
PTCD3Q96EY7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.99□□□□□ -2.09
PTCD3Q96EY7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.99□□□□□ -2.09
PTCD3Q96EY7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
PTCD3Q96EY7 MIR17-201ENST00000385012 84 ntBASIC1.98□□□□□ -2.09
PTCD3Q96EY7 MIR802-201ENST00000390235 94 ntBASIC1.98□□□□□ -2.09
PTCD3Q96EY7 SNORA3.2-201ENST00000408221 125 ntBASIC1.98□□□□□ -2.09
PTCD3Q96EY7 RN7SKP200-201ENST00000410564 320 ntBASIC1.98□□□□□ -2.09
PTCD3Q96EY7 RNA5SP450-201ENST00000411206 102 ntBASIC1.98□□□□□ -2.09
PTCD3Q96EY7 RNU6-938P-201ENST00000411285 103 ntBASIC1.98□□□□□ -2.09
PTCD3Q96EY7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PTCD3Q96EY7 RPL23AP63-201ENST00000498752 471 ntBASIC1.98□□□□□ -2.09
PTCD3Q96EY7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.98□□□□□ -2.09
PTCD3Q96EY7 AC090049.2-201ENST00000550377 109 ntBASIC1.98□□□□□ -2.09
PTCD3Q96EY7 AL359881.1-201ENST00000602916 267 ntBASIC1.98□□□□□ -2.09
PTCD3Q96EY7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.98□□□□□ -2.09
PTCD3Q96EY7 SNORA28-201ENST00000606769 126 ntBASIC1.98□□□□□ -2.09
PTCD3Q96EY7 MIR219B-201ENST00000637023 88 ntBASIC1.98□□□□□ -2.09
PTCD3Q96EY7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
PTCD3Q96EY7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
PTCD3Q96EY7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
PTCD3Q96EY7 SNORD18B-201ENST00000365659 72 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms